RNA–Protein interactions for RNA: ENST00000495893.6

PHC3-215, Transcript of polyhomeotic homolog 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHC3, Length 12,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-215ENST00000495893 GTF2F1P35269 517 aaKnown RBP eCLIP4.49□□□□□ -1.69
PHC3-215ENST00000495893 NAP1L3Q99457 506 aaPredicted RBP4.49□□□□□ -1.69
PHC3-215ENST00000495893 DISP1Q96F81 1524 aa4.49□□□□□ -1.69
PHC3-215ENST00000495893 ZKSCAN1P17029 563 aaPredicted RBP4.49□□□□□ -1.69
PHC3-215ENST00000495893 SKIDA1Q1XH10 827 aa4.49□□□□□ -1.69
PHC3-215ENST00000495893 DACH1Q9UI36 760 aa4.49□□□□□ -1.69
PHC3-215ENST00000495893 DHX57Q6P158 1386 aaKnown RBP4.49□□□□□ -1.69
PHC3-215ENST00000495893 HFM1A2PYH4 1435 aa4.49□□□□□ -1.69
PHC3-215ENST00000495893 KINO60870 393 aaKnown RBP4.49□□□□□ -1.69
PHC3-215ENST00000495893 NOL3O60936 208 aaKnown RBP4.49□□□□□ -1.69
PHC3-215ENST00000495893 PDCP20941 246 aa4.49□□□□□ -1.69
PHC3-215ENST00000495893 ARHGEF40Q8TER5 1519 aa4.49□□□□□ -1.69
PHC3-215ENST00000495893 KLHL10Q6JEL2 608 aa4.49□□□□□ -1.69
PHC3-215ENST00000495893 SYNE3Q6ZMZ3 975 aa4.49□□□□□ -1.69
PHC3-215ENST00000495893 CIZ1Q9ULV3 898 aaPredicted RBP4.49□□□□□ -1.69
PHC3-215ENST00000495893 GCOM1H8Y6P7 765 aaPredicted RBP4.49□□□□□ -1.69
PHC3-215ENST00000495893 MYZAPP0CAP1 466 aa4.49□□□□□ -1.69
PHC3-215ENST00000495893 PIP4K2BP78356 416 aa4.49□□□□□ -1.69
PHC3-215ENST00000495893 ATP7AQ04656 1500 aa4.49□□□□□ -1.69
PHC3-215ENST00000495893 SMG6Q86US8 1419 aaKnown RBP4.49□□□□□ -1.69
PHC3-215ENST00000495893 PPFIBP1Q86W92 1011 aa4.49□□□□□ -1.69
PHC3-215ENST00000495893 CCDC94Q9BW85 323 aaPredicted RBP4.49□□□□□ -1.69
PHC3-215ENST00000495893 TERF2IPQ9NYB0 399 aa4.49□□□□□ -1.69
PHC3-215ENST00000495893 NEMFO60524 1076 aa4.49□□□□□ -1.69
PHC3-215ENST00000495893 CCDC6Q16204 474 aa4.49□□□□□ -1.69
PHC3-215ENST00000495893 JAKMIP3Q5VZ66 844 aa4.49□□□□□ -1.69
PHC3-215ENST00000495893 ANKRD50Q9ULJ7 1429 aa4.49□□□□□ -1.69
PHC3-215ENST00000495893 CSB-PGBD3P0DP91 1061 aa4.49□□□□□ -1.69
PHC3-215ENST00000495893 YEATS2Q9ULM3 1422 aa4.48□□□□□ -1.69
PHC3-215ENST00000495893 ARID4AP29374 1257 aaPredicted RBP4.48□□□□□ -1.69
PHC3-215ENST00000495893 TUBB4BP68371 445 aa4.48□□□□□ -1.69
PHC3-215ENST00000495893 TAX1BP1Q86VP1 789 aa4.48□□□□□ -1.69
PHC3-215ENST00000495893 MAGEC2Q9UBF1 373 aaPredicted RBP4.48□□□□□ -1.69
PHC3-215ENST00000495893 PAXBP1Q9Y5B6 917 aa4.48□□□□□ -1.69
PHC3-215ENST00000495893 SLC4A3P48751 1232 aa4.48□□□□□ -1.69
PHC3-215ENST00000495893 RRP1P56182 461 aaKnown RBP4.48□□□□□ -1.69
PHC3-215ENST00000495893 NUP153P49790 1475 aaKnown RBP4.48□□□□□ -1.69
PHC3-215ENST00000495893 FGD6Q6ZV73 1430 aa4.48□□□□□ -1.69
PHC3-215ENST00000495893 DIP2BQ9P265 1576 aa4.48□□□□□ -1.69
PHC3-215ENST00000495893 C22orf23Q9BZE7 217 aa4.48□□□□□ -1.69
PHC3-215ENST00000495893 CAMSAP2Q08AD1 1489 aa4.48□□□□□ -1.69
PHC3-215ENST00000495893 NUP133Q8WUM0 1156 aa4.48□□□□□ -1.69
PHC3-215ENST00000495893 SMC4Q9NTJ3 1288 aa4.48□□□□□ -1.69
PHC3-215ENST00000495893 FBXO3Q9UK99 471 aa4.48□□□□□ -1.69
PHC3-215ENST00000495893 ANKRD62A6NC57 917 aa4.48□□□□□ -1.69
PHC3-215ENST00000495893 PPP1R12BO60237 982 aaPredicted RBP4.48□□□□□ -1.69
PHC3-215ENST00000495893 PTPN14Q15678 1187 aa4.48□□□□□ -1.69
PHC3-215ENST00000495893 RBBP5Q15291 538 aaKnown RBP4.48□□□□□ -1.69
PHC3-215ENST00000495893 NOL8Q76FK4 1167 aaKnown RBP4.48□□□□□ -1.69
PHC3-215ENST00000495893 ATP10BO94823 1461 aa4.48□□□□□ -1.69
PHC3-215ENST00000495893 AP1ARQ63HQ0 302 aa4.48□□□□□ -1.69
PHC3-215ENST00000495893 RTF1Q92541 710 aaKnown RBP4.48□□□□□ -1.69
PHC3-215ENST00000495893 MYO5CQ9NQX4 1742 aa4.48□□□□□ -1.69
PHC3-215ENST00000495893 ZSCAN12O43309 604 aa4.48□□□□□ -1.69
PHC3-215ENST00000495893 TACC1O75410 805 aa4.48□□□□□ -1.69
PHC3-215ENST00000495893 INTS3Q68E01 1043 aaKnown RBP4.48□□□□□ -1.69
PHC3-215ENST00000495893 CCDC83Q8IWF9 413 aa4.48□□□□□ -1.69
PHC3-215ENST00000495893 SAFBQ15424 915 aaKnown RBP eCLIP4.48□□□□□ -1.69
PHC3-215ENST00000495893 CCDC38Q502W7 563 aa4.47□□□□□ -1.69
PHC3-215ENST00000495893 MSL1Q68DK7 614 aa4.47□□□□□ -1.69
PHC3-215ENST00000495893 PLCD3Q8N3E9 789 aa4.47□□□□□ -1.69
PHC3-215ENST00000495893 ANKS4BQ8N8V4 417 aa4.47□□□□□ -1.69
PHC3-215ENST00000495893 SMARCC1Q92922 1105 aaPredicted RBP4.47□□□□□ -1.69
PHC3-215ENST00000495893 NSRP1Q9H0G5 558 aaKnown RBP4.47□□□□□ -1.69
PHC3-215ENST00000495893 MLH3Q9UHC1 1453 aa4.47□□□□□ -1.69
PHC3-215ENST00000495893 NGEFQ8N5V2 710 aa4.47□□□□□ -1.69
PHC3-215ENST00000495893 SYCP1Q15431 976 aa4.47□□□□□ -1.69
PHC3-215ENST00000495893 NGDNQ8NEJ9 315 aaKnown RBP4.47□□□□□ -1.69
PHC3-215ENST00000495893 USH1CQ9Y6N9 552 aa4.47□□□□□ -1.69
PHC3-215ENST00000495893 SAMD9Q5K651 1589 aa4.47□□□□□ -1.69
PHC3-215ENST00000495893 APBB1O00213 710 aa4.47□□□□□ -1.69
PHC3-215ENST00000495893 IMMTQ16891 758 aaKnown RBP4.47□□□□□ -1.69
PHC3-215ENST00000495893 SDF4Q9BRK5 362 aa4.47□□□□□ -1.69
PHC3-215ENST00000495893 ANKRD30BQ9BXX2 1392 aa4.47□□□□□ -1.69
PHC3-215ENST00000495893 CASQ1P31415 396 aa4.47□□□□□ -1.69
PHC3-215ENST00000495893 PPFIBP2Q8ND30 876 aa4.47□□□□□ -1.69
PHC3-215ENST00000495893 BCL11BQ9C0K0 894 aaPredicted RBP4.47□□□□□ -1.69
PHC3-215ENST00000495893 RGL3Q3MIN7 710 aa4.47□□□□□ -1.69
PHC3-215ENST00000495893 RNF214Q8ND24 703 aa4.47□□□□□ -1.69
PHC3-215ENST00000495893 ZNF396Q96N95 335 aaPredicted RBP4.47□□□□□ -1.69
PHC3-215ENST00000495893 LMAN1P49257 510 aa4.47□□□□□ -1.69
PHC3-215ENST00000495893 SRPK2P78362 688 aaKnown RBP4.47□□□□□ -1.69
PHC3-215ENST00000495893 DDX23Q9BUQ8 820 aaKnown RBP4.46□□□□□ -1.69
PHC3-215ENST00000495893 ERC1Q8IUD2 1116 aa4.46□□□□□ -1.69
PHC3-215ENST00000495893 LUC7L2Q9Y383 392 aaKnown RBP4.46□□□□□ -1.69
PHC3-215ENST00000495893 EVA1CP58658 441 aa4.46□□□□□ -1.7
PHC3-215ENST00000495893 CCDC174Q6PII3 467 aa4.46□□□□□ -1.7
PHC3-215ENST00000495893 LMNTD2Q8IXW0 634 aa4.46□□□□□ -1.7
PHC3-215ENST00000495893 SPC24Q8NBT2 197 aa4.46□□□□□ -1.7
PHC3-215ENST00000495893 ABCA9Q8IUA7 1624 aa4.46□□□□□ -1.7
PHC3-215ENST00000495893 DISP3Q9P2K9 1392 aa4.46□□□□□ -1.7
PHC3-215ENST00000495893 NAA25Q14CX7 972 aa4.46□□□□□ -1.7
PHC3-215ENST00000495893 AFAP1Q8N556 730 aa4.46□□□□□ -1.7
PHC3-215ENST00000495893 TRERF1Q96PN7 1200 aa4.46□□□□□ -1.7
PHC3-215ENST00000495893 TIAM1Q13009 1591 aa4.46□□□□□ -1.7
PHC3-215ENST00000495893 CDK13Q14004 1512 aaKnown RBP4.46□□□□□ -1.7
PHC3-215ENST00000495893 SMTNL1A8MU46 457 aa4.46□□□□□ -1.7
PHC3-215ENST00000495893 MAP3K7CLP57077 242 aa4.46□□□□□ -1.7
PHC3-215ENST00000495893 MORC1Q86VD1 984 aa4.46□□□□□ -1.7
PHC3-215ENST00000495893 CEP112Q8N8E3 955 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms