RNA–Protein interactions for RNA: ENST00000495537.1

KCTD3-205, Transcript of potassium channel tetramerization domain containing 3, humanhuman

TSL 1 (best)

Gene KCTD3, Length 2,722 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCTD3-205ENST00000495537 ZNF500O60304 480 aaPredicted RBP4.15□□□□□ -1.74
KCTD3-205ENST00000495537 MCM4P33991 863 aa4.15□□□□□ -1.74
KCTD3-205ENST00000495537 EIF4G2P78344 907 aaKnown RBP eCLIP4.15□□□□□ -1.74
KCTD3-205ENST00000495537 PDE3BQ13370 1112 aa4.15□□□□□ -1.74
KCTD3-205ENST00000495537 PTPRNQ16849 979 aa4.15□□□□□ -1.74
KCTD3-205ENST00000495537 CENPQQ7L2Z9 268 aaPredicted RBP4.15□□□□□ -1.74
KCTD3-205ENST00000495537 HLA-CQ95604 372 aa4.15□□□□□ -1.74
KCTD3-205ENST00000495537 ARHGAP35Q9NRY4 1499 aa4.15□□□□□ -1.74
KCTD3-205ENST00000495537 C6orf229H3BNL8 230 aa4.15□□□□□ -1.75
KCTD3-205ENST00000495537 FDX1P10109 184 aa4.15□□□□□ -1.75
KCTD3-205ENST00000495537 TNNT2P45379 298 aaPredicted RBP4.15□□□□□ -1.75
KCTD3-205ENST00000495537 ZSCAN1Q8NBB4 408 aa4.15□□□□□ -1.75
KCTD3-205ENST00000495537 CCDC102AQ96A19 550 aa4.15□□□□□ -1.75
KCTD3-205ENST00000495537 HFM1A2PYH4 1435 aa4.15□□□□□ -1.75
KCTD3-205ENST00000495537 PTPN23Q9H3S7 1636 aa4.15□□□□□ -1.75
KCTD3-205ENST00000495537 CCDC18Q5T9S5 1454 aa4.15□□□□□ -1.75
KCTD3-205ENST00000495537 BECN1Q14457 450 aa4.15□□□□□ -1.75
KCTD3-205ENST00000495537 MPNDQ8N594 471 aa4.15□□□□□ -1.75
KCTD3-205ENST00000495537 RGS22Q8NE09 1264 aa4.15□□□□□ -1.75
KCTD3-205ENST00000495537 FAM13BQ9NYF5 915 aa4.15□□□□□ -1.75
KCTD3-205ENST00000495537 HECW1Q76N89 1606 aa4.14□□□□□ -1.75
KCTD3-205ENST00000495537 SPDYE5A6NIY4 337 aa4.14□□□□□ -1.75
KCTD3-205ENST00000495537 VARSP26640 1264 aaKnown RBP4.14□□□□□ -1.75
KCTD3-205ENST00000495537 GUCA2AQ02747 115 aa4.14□□□□□ -1.75
KCTD3-205ENST00000495537 CCDC173Q0VFZ6 552 aa4.14□□□□□ -1.75
KCTD3-205ENST00000495537 SCARF1Q14162 830 aa4.14□□□□□ -1.75
KCTD3-205ENST00000495537 TRIM44Q96DX7 344 aaPredicted RBP4.14□□□□□ -1.75
KCTD3-205ENST00000495537 ZMYM3Q14202 1370 aa4.14□□□□□ -1.75
KCTD3-205ENST00000495537 H3BM21 787 aa4.14□□□□□ -1.75
KCTD3-205ENST00000495537 TRAK2O60296 914 aa4.14□□□□□ -1.75
KCTD3-205ENST00000495537 MMP14P50281 582 aa4.14□□□□□ -1.75
KCTD3-205ENST00000495537 HAP1P54257 671 aaPredicted RBP4.14□□□□□ -1.75
KCTD3-205ENST00000495537 SH3BP2P78314 561 aa4.14□□□□□ -1.75
KCTD3-205ENST00000495537 LCE2CQ5TA81 110 aa4.14□□□□□ -1.75
KCTD3-205ENST00000495537 PTCRAQ6ISU1 281 aaPredicted RBP4.14□□□□□ -1.75
KCTD3-205ENST00000495537 TRIM46Q7Z4K8 759 aa4.14□□□□□ -1.75
KCTD3-205ENST00000495537 SYMPKQ92797 1274 aaKnown RBP4.14□□□□□ -1.75
KCTD3-205ENST00000495537 SECISBP2LQ93073 1101 aaKnown RBP4.14□□□□□ -1.75
KCTD3-205ENST00000495537 MIA2Q96PC5 1412 aa4.14□□□□□ -1.75
KCTD3-205ENST00000495537 EVA1BQ9NVM1 165 aa4.14□□□□□ -1.75
KCTD3-205ENST00000495537 IBTKQ9P2D0 1353 aaPredicted RBP4.13□□□□□ -1.75
KCTD3-205ENST00000495537 SMARCA4P51532 1647 aa4.13□□□□□ -1.75
KCTD3-205ENST00000495537 KIF7Q2M1P5 1343 aa4.13□□□□□ -1.75
KCTD3-205ENST00000495537 GMPRP36959 345 aa4.13□□□□□ -1.75
KCTD3-205ENST00000495537 SKAP1Q86WV1 359 aa4.13□□□□□ -1.75
KCTD3-205ENST00000495537 ANP32BQ92688 251 aaKnown RBP4.13□□□□□ -1.75
KCTD3-205ENST00000495537 UNC93B1Q9H1C4 597 aa4.13□□□□□ -1.75
KCTD3-205ENST00000495537 PRDM10Q9NQV6 1147 aa4.13□□□□□ -1.75
KCTD3-205ENST00000495537 ROCK2O75116 1388 aaKnown RBP4.13□□□□□ -1.75
KCTD3-205ENST00000495537 DENND4BO75064 1496 aaPredicted RBP4.13□□□□□ -1.75
KCTD3-205ENST00000495537 UQCRHLA0A096LP55 91 aa4.13□□□□□ -1.75
KCTD3-205ENST00000495537 UQCRHP07919 91 aa4.13□□□□□ -1.75
KCTD3-205ENST00000495537 BMP1P13497 986 aa4.13□□□□□ -1.75
KCTD3-205ENST00000495537 KCNH2Q12809 1159 aa4.13□□□□□ -1.75
KCTD3-205ENST00000495537 DESI1Q6ICB0 168 aa4.13□□□□□ -1.75
KCTD3-205ENST00000495537 BCCIPQ9P287 314 aaKnown RBP eCLIP4.13□□□□□ -1.75
KCTD3-205ENST00000495537 NOL7Q9UMY1 257 aaKnown RBP4.13□□□□□ -1.75
KCTD3-205ENST00000495537 TOP2BQ02880 1626 aa4.13□□□□□ -1.75
KCTD3-205ENST00000495537 ARHGAP31Q2M1Z3 1444 aa4.12□□□□□ -1.75
KCTD3-205ENST00000495537 BIVM-ERCC5R4GMW8 1640 aa4.12□□□□□ -1.75
KCTD3-205ENST00000495537 BRD4O60885 1362 aaPredicted RBP4.12□□□□□ -1.75
KCTD3-205ENST00000495537 NCOA3Q9Y6Q9 1424 aa4.12□□□□□ -1.75
KCTD3-205ENST00000495537 VGLL3A8MV65 326 aa4.12□□□□□ -1.75
KCTD3-205ENST00000495537 MCM5P33992 734 aa4.12□□□□□ -1.75
KCTD3-205ENST00000495537 DIXDC1Q155Q3 683 aa4.12□□□□□ -1.75
KCTD3-205ENST00000495537 E9PCH4 1651 aa4.11□□□□□ -1.75
KCTD3-205ENST00000495537 AQRO60306 1485 aaKnown RBP eCLIP4.11□□□□□ -1.75
KCTD3-205ENST00000495537 PLEKHH2Q8IVE3 1493 aa4.11□□□□□ -1.75
KCTD3-205ENST00000495537 GTF2F1P35269 517 aaKnown RBP eCLIP4.11□□□□□ -1.75
KCTD3-205ENST00000495537 DDIT3P35638 169 aa4.11□□□□□ -1.75
KCTD3-205ENST00000495537 CSPP1Q1MSJ5 1256 aa4.11□□□□□ -1.75
KCTD3-205ENST00000495537 SASS6Q6UVJ0 657 aa4.11□□□□□ -1.75
KCTD3-205ENST00000495537 GAS2L3Q86XJ1 694 aa4.11□□□□□ -1.75
KCTD3-205ENST00000495537 FAM174AQ8TBP5 190 aa4.11□□□□□ -1.75
KCTD3-205ENST00000495537 ZFP42Q96MM3 310 aa4.11□□□□□ -1.75
KCTD3-205ENST00000495537 CRBNQ96SW2 442 aa4.11□□□□□ -1.75
KCTD3-205ENST00000495537 BCORL1Q5H9F3 1711 aa4.11□□□□□ -1.75
KCTD3-205ENST00000495537 ADH1CP00326 375 aa4.11□□□□□ -1.75
KCTD3-205ENST00000495537 SSTR3P32745 418 aaPredicted RBP4.11□□□□□ -1.75
KCTD3-205ENST00000495537 IRX3P78415 501 aaPredicted RBP4.11□□□□□ -1.75
KCTD3-205ENST00000495537 NNTQ13423 1086 aa4.11□□□□□ -1.75
KCTD3-205ENST00000495537 MTMR2Q13614 643 aa4.11□□□□□ -1.75
KCTD3-205ENST00000495537 ZNF511Q8NB15 262 aa4.11□□□□□ -1.75
KCTD3-205ENST00000495537 PRR7Q8TB68 274 aa4.11□□□□□ -1.75
KCTD3-205ENST00000495537 SPIRE2Q8WWL2 714 aa4.11□□□□□ -1.75
KCTD3-205ENST00000495537 BAP1Q92560 729 aa4.11□□□□□ -1.75
KCTD3-205ENST00000495537 PDLIM2Q96JY6 352 aa4.11□□□□□ -1.75
KCTD3-205ENST00000495537 CHMP4AQ9BY43 222 aa4.11□□□□□ -1.75
KCTD3-205ENST00000495537 PCDHGC3Q9UN70 934 aa4.11□□□□□ -1.75
KCTD3-205ENST00000495537 R3HCC1Q9Y3T6 440 aaKnown RBP4.11□□□□□ -1.75
KCTD3-205ENST00000495537 NAIPQ13075 1403 aa4.11□□□□□ -1.75
KCTD3-205ENST00000495537 GCC2Q8IWJ2 1684 aa4.11□□□□□ -1.75
KCTD3-205ENST00000495537 TEX14Q8IWB6 1497 aa4.11□□□□□ -1.75
KCTD3-205ENST00000495537 GJA5P36382 358 aa4.1□□□□□ -1.75
KCTD3-205ENST00000495537 XP32Q5T750 250 aa4.1□□□□□ -1.75
KCTD3-205ENST00000495537 MRPL14Q6P1L8 145 aaKnown RBP4.1□□□□□ -1.75
KCTD3-205ENST00000495537 TBC1D2Q9BYX2 928 aa4.1□□□□□ -1.75
KCTD3-205ENST00000495537 SLKQ9H2G2 1235 aaPredicted RBP4.1□□□□□ -1.75
KCTD3-205ENST00000495537 CHMP5Q9NZZ3 219 aa4.1□□□□□ -1.75
KCTD3-205ENST00000495537 KIAA1107Q9UPP5 1409 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms