RNA–Protein interactions for RNA: ENST00000494943.5

PHC3-214, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best) BASIC

Gene PHC3, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-214ENST00000494943 GAS2L3Q86XJ1 694 aa7.22□□□□□ -1.25
PHC3-214ENST00000494943 PLCD4Q9BRC7 762 aa7.22□□□□□ -1.25
PHC3-214ENST00000494943 KIF3CO14782 793 aa7.22□□□□□ -1.25
PHC3-214ENST00000494943 TPRNQ4KMQ1 711 aa7.22□□□□□ -1.25
PHC3-214ENST00000494943 SKAP1Q86WV1 359 aa7.22□□□□□ -1.25
PHC3-214ENST00000494943 ZSCAN31Q96LW9 406 aaPredicted RBP7.22□□□□□ -1.25
PHC3-214ENST00000494943 NCAPGQ9BPX3 1015 aa7.22□□□□□ -1.25
PHC3-214ENST00000494943 TNMDQ9H2S6 317 aa7.22□□□□□ -1.25
PHC3-214ENST00000494943 LMBRD1Q9NUN5 540 aa7.22□□□□□ -1.25
PHC3-214ENST00000494943 KDM6BO15054 1643 aa7.22□□□□□ -1.25
PHC3-214ENST00000494943 GOLGA6L7A0A1B0GV03 622 aa7.22□□□□□ -1.25
PHC3-214ENST00000494943 RARSP54136 660 aaKnown RBP7.22□□□□□ -1.25
PHC3-214ENST00000494943 C16orf45Q96MC5 204 aaPredicted RBP7.22□□□□□ -1.25
PHC3-214ENST00000494943 RUFY1Q96T51 708 aa7.22□□□□□ -1.25
PHC3-214ENST00000494943 DDX19AQ9NUU7 478 aaKnown RBP7.22□□□□□ -1.25
PHC3-214ENST00000494943 A6NNZ2 444 aa7.22□□□□□ -1.25
PHC3-214ENST00000494943 NUCB1Q02818 461 aa7.22□□□□□ -1.25
PHC3-214ENST00000494943 TUBB8Q3ZCM7 444 aa7.22□□□□□ -1.25
PHC3-214ENST00000494943 C10orf67Q8IYJ2 551 aa7.22□□□□□ -1.25
PHC3-214ENST00000494943 CLIP2Q9UDT6 1046 aa7.22□□□□□ -1.25
PHC3-214ENST00000494943 MYO6Q9UM54 1294 aa7.22□□□□□ -1.25
PHC3-214ENST00000494943 PLXNC1O60486 1568 aa7.21□□□□□ -1.25
PHC3-214ENST00000494943 CLSTN1O94985 981 aa7.21□□□□□ -1.25
PHC3-214ENST00000494943 CCDC73Q6ZRK6 1079 aa7.21□□□□□ -1.25
PHC3-214ENST00000494943 CCDC50Q8IVM0 306 aa7.21□□□□□ -1.25
PHC3-214ENST00000494943 FAM200AQ8TCP9 573 aa7.21□□□□□ -1.25
PHC3-214ENST00000494943 RUFY2Q8WXA3 655 aa7.21□□□□□ -1.25
PHC3-214ENST00000494943 INTS4Q96HW7 963 aaKnown RBP7.21□□□□□ -1.25
PHC3-214ENST00000494943 CCDC172P0C7W6 258 aa7.21□□□□□ -1.26
PHC3-214ENST00000494943 LMAN1P49257 510 aa7.21□□□□□ -1.26
PHC3-214ENST00000494943 MNAT1P51948 309 aa7.21□□□□□ -1.26
PHC3-214ENST00000494943 EIF5P55010 431 aaKnown RBP7.21□□□□□ -1.26
PHC3-214ENST00000494943 SNW1Q13573 536 aaKnown RBP7.21□□□□□ -1.26
PHC3-214ENST00000494943 NBPF11Q86T75 865 aa7.21□□□□□ -1.26
PHC3-214ENST00000494943 GPATCH3Q96I76 525 aa7.21□□□□□ -1.26
PHC3-214ENST00000494943 CEP83Q9Y592 693 aa7.21□□□□□ -1.26
PHC3-214ENST00000494943 ASXL1Q8IXJ9 1541 aa7.21□□□□□ -1.26
PHC3-214ENST00000494943 NCOA3Q9Y6Q9 1424 aa7.21□□□□□ -1.26
PHC3-214ENST00000494943 MBD5Q9P267 1494 aa7.21□□□□□ -1.26
PHC3-214ENST00000494943 BCORL1Q5H9F3 1711 aa7.21□□□□□ -1.26
PHC3-214ENST00000494943 SETSIPP0DME0 302 aa7.21□□□□□ -1.26
PHC3-214ENST00000494943 SRPK2P78362 688 aaKnown RBP7.21□□□□□ -1.26
PHC3-214ENST00000494943 KRT85P78386 507 aa7.21□□□□□ -1.26
PHC3-214ENST00000494943 NOC3LQ8WTT2 800 aaKnown RBP7.21□□□□□ -1.26
PHC3-214ENST00000494943 RBM27Q9P2N5 1060 aaKnown RBP7.21□□□□□ -1.26
PHC3-214ENST00000494943 TDRD9Q8NDG6 1382 aaKnown RBP7.21□□□□□ -1.26
PHC3-214ENST00000494943 GOLIM4O00461 696 aa7.21□□□□□ -1.26
PHC3-214ENST00000494943 SEC24BO95487 1268 aa7.21□□□□□ -1.26
PHC3-214ENST00000494943 ATF7IPQ6VMQ6 1270 aa7.21□□□□□ -1.26
PHC3-214ENST00000494943 RTF1Q92541 710 aaKnown RBP7.21□□□□□ -1.26
PHC3-214ENST00000494943 SECISBP2LQ93073 1101 aaKnown RBP7.21□□□□□ -1.26
PHC3-214ENST00000494943 PTPRKQ15262 1439 aa7.21□□□□□ -1.26
PHC3-214ENST00000494943 ATP2B3Q16720 1220 aa7.2□□□□□ -1.26
PHC3-214ENST00000494943 GBP6Q6ZN66 633 aa7.2□□□□□ -1.26
PHC3-214ENST00000494943 BICD2Q8TD16 824 aa7.2□□□□□ -1.26
PHC3-214ENST00000494943 USP19O94966 1318 aa7.2□□□□□ -1.26
PHC3-214ENST00000494943 TUBB2AQ13885 445 aa7.2□□□□□ -1.26
PHC3-214ENST00000494943 ALDH1L2Q3SY69 923 aa7.2□□□□□ -1.26
PHC3-214ENST00000494943 IQCEQ6IPM2 695 aa7.2□□□□□ -1.26
PHC3-214ENST00000494943 TUBB2BQ9BVA1 445 aa7.2□□□□□ -1.26
PHC3-214ENST00000494943 ARFGAP3Q9NP61 516 aa7.2□□□□□ -1.26
PHC3-214ENST00000494943 ADCY10Q96PN6 1610 aa7.2□□□□□ -1.26
PHC3-214ENST00000494943 ERCC3P19447 782 aa7.2□□□□□ -1.26
PHC3-214ENST00000494943 RGL3Q3MIN7 710 aa7.2□□□□□ -1.26
PHC3-214ENST00000494943 ZNF830Q96NB3 372 aaPredicted RBP7.2□□□□□ -1.26
PHC3-214ENST00000494943 PPRC1Q5VV67 1664 aaKnown RBP7.2□□□□□ -1.26
PHC3-214ENST00000494943 COL17A1Q9UMD9 1497 aaPredicted RBP7.2□□□□□ -1.26
PHC3-214ENST00000494943 A0A1B0GUA9 196 aa7.2□□□□□ -1.26
PHC3-214ENST00000494943 U2AF1L5P0DN76 240 aaPredicted RBP7.2□□□□□ -1.26
PHC3-214ENST00000494943 U2AF1Q01081 240 aaKnown RBP eCLIP7.2□□□□□ -1.26
PHC3-214ENST00000494943 MUM1L1Q5H9M0 696 aa7.2□□□□□ -1.26
PHC3-214ENST00000494943 C14orf37Q86TY3 774 aa7.2□□□□□ -1.26
PHC3-214ENST00000494943 TRERF1Q96PN7 1200 aa7.2□□□□□ -1.26
PHC3-214ENST00000494943 NPC1L1Q9UHC9 1359 aa7.19□□□□□ -1.26
PHC3-214ENST00000494943 TMCO5BA8MYB1 307 aa7.19□□□□□ -1.26
PHC3-214ENST00000494943 ANAPC15P60006 121 aa7.19□□□□□ -1.26
PHC3-214ENST00000494943 EFCAB13Q8IY85 973 aa7.19□□□□□ -1.26
PHC3-214ENST00000494943 HOOK1Q9UJC3 728 aaKnown RBP7.19□□□□□ -1.26
PHC3-214ENST00000494943 ZNF853P0CG23 659 aa7.19□□□□□ -1.26
PHC3-214ENST00000494943 NEK4P51957 841 aa7.19□□□□□ -1.26
PHC3-214ENST00000494943 ZSCAN26Q16670 478 aa7.19□□□□□ -1.26
PHC3-214ENST00000494943 MCTP2Q6DN12 878 aa7.19□□□□□ -1.26
PHC3-214ENST00000494943 LUZP1Q86V48 1076 aa7.19□□□□□ -1.26
PHC3-214ENST00000494943 SPATS2Q86XZ4 545 aaKnown RBP7.19□□□□□ -1.26
PHC3-214ENST00000494943 CEP57L1Q8IYX8 460 aa7.19□□□□□ -1.26
PHC3-214ENST00000494943 CCAR2Q8N163 923 aaKnown RBP7.19□□□□□ -1.26
PHC3-214ENST00000494943 RGS22Q8NE09 1264 aa7.19□□□□□ -1.26
PHC3-214ENST00000494943 ANKRD50Q9ULJ7 1429 aa7.19□□□□□ -1.26
PHC3-214ENST00000494943 CDC25BP30305 580 aa7.19□□□□□ -1.26
PHC3-214ENST00000494943 SATB1Q01826 763 aa7.19□□□□□ -1.26
PHC3-214ENST00000494943 CTCFLQ8NI51 663 aaPredicted RBP7.19□□□□□ -1.26
PHC3-214ENST00000494943 CPSF2Q9P2I0 782 aaKnown RBP7.19□□□□□ -1.26
PHC3-214ENST00000494943 OSCARQ8IYS5 282 aa7.19□□□□□ -1.26
PHC3-214ENST00000494943 DRC1Q96MC2 740 aa7.19□□□□□ -1.26
PHC3-214ENST00000494943 FBXO3Q9UK99 471 aa7.19□□□□□ -1.26
PHC3-214ENST00000494943 MPHOSPH10O00566 681 aaKnown RBP7.18□□□□□ -1.26
PHC3-214ENST00000494943 STK31Q9BXU1 1019 aa7.18□□□□□ -1.26
PHC3-214ENST00000494943 TTC12Q9H892 705 aaPredicted RBP7.18□□□□□ -1.26
PHC3-214ENST00000494943 CTNNA3Q9UI47 895 aa7.18□□□□□ -1.26
PHC3-214ENST00000494943 JRKLQ9Y4A0 524 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms