RNA–Protein interactions for RNA: ENST00000494759.1

TRIM16-207, Transcript of tripartite motif containing 16, humanhuman

TSL 3

Gene TRIM16, Length 426 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM16-207ENST00000494759 NCAPD2Q15021 1401 aa8.33□□□□□ -1.08
TRIM16-207ENST00000494759 WDR43Q15061 677 aaKnown RBP eCLIP8.33□□□□□ -1.08
TRIM16-207ENST00000494759 DIEXFQ68CQ4 756 aaKnown RBP8.33□□□□□ -1.08
TRIM16-207ENST00000494759 ILDR2Q71H61 639 aa8.33□□□□□ -1.08
TRIM16-207ENST00000494759 ZCRB1Q8TBF4 217 aaKnown RBP8.33□□□□□ -1.08
TRIM16-207ENST00000494759 PCDH11XQ9BZA7 1347 aa8.32□□□□□ -1.08
TRIM16-207ENST00000494759 PCDH11YQ9BZA8 1340 aa8.32□□□□□ -1.08
TRIM16-207ENST00000494759 AEBP1Q8IUX7 1158 aa8.32□□□□□ -1.08
TRIM16-207ENST00000494759 SPG7Q9UQ90 795 aa8.32□□□□□ -1.08
TRIM16-207ENST00000494759 KDRP35968 1356 aa8.32□□□□□ -1.08
TRIM16-207ENST00000494759 PLEKHG2Q9H7P9 1386 aa8.32□□□□□ -1.08
TRIM16-207ENST00000494759 AMOTQ4VCS5 1084 aa8.31□□□□□ -1.08
TRIM16-207ENST00000494759 PLEKHO1Q53GL0 409 aaPredicted RBP8.31□□□□□ -1.08
TRIM16-207ENST00000494759 FAM182BQ5T319 152 aa8.31□□□□□ -1.08
TRIM16-207ENST00000494759 DDX54Q8TDD1 881 aaKnown RBP8.31□□□□□ -1.08
TRIM16-207ENST00000494759 PNNQ9H307 717 aaKnown RBP8.31□□□□□ -1.08
TRIM16-207ENST00000494759 PKD1L3Q7Z443 1732 aa8.3□□□□□ -1.08
TRIM16-207ENST00000494759 FCHSD2O94868 740 aa8.3□□□□□ -1.08
TRIM16-207ENST00000494759 PRKAR2BP31323 418 aa8.3□□□□□ -1.08
TRIM16-207ENST00000494759 C1orf141Q5JVX7 400 aa8.3□□□□□ -1.08
TRIM16-207ENST00000494759 FAM196AQ6ZSG2 479 aa8.3□□□□□ -1.08
TRIM16-207ENST00000494759 MARCH10Q8NA82 808 aaPredicted RBP8.3□□□□□ -1.08
TRIM16-207ENST00000494759 MRS2Q9HD23 443 aa8.3□□□□□ -1.08
TRIM16-207ENST00000494759 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.3□□□□□ -1.08
TRIM16-207ENST00000494759 EP400Q96L91 3159 aa8.3□□□□□ -1.08
TRIM16-207ENST00000494759 MAPK8IP3Q9UPT6 1336 aa8.29□□□□□ -1.08
TRIM16-207ENST00000494759 SF3B2Q13435 895 aaKnown RBP8.29□□□□□ -1.08
TRIM16-207ENST00000494759 ZNF530Q6P9A1 599 aaPredicted RBP8.29□□□□□ -1.08
TRIM16-207ENST00000494759 IFNL2Q8IZJ0 200 aa8.29□□□□□ -1.08
TRIM16-207ENST00000494759 GAS2L2Q8NHY3 880 aa8.28□□□□□ -1.08
TRIM16-207ENST00000494759 RSPH6AQ9H0K4 717 aa8.28□□□□□ -1.08
TRIM16-207ENST00000494759 SHANK3Q9BYB0 1731 aa8.28□□□□□ -1.08
TRIM16-207ENST00000494759 CYP27B1O15528 508 aa8.27□□□□□ -1.09
TRIM16-207ENST00000494759 HSP90AB1P08238 724 aaKnown RBP8.27□□□□□ -1.09
TRIM16-207ENST00000494759 PHKG2P15735 406 aa8.27□□□□□ -1.09
TRIM16-207ENST00000494759 SYTL4Q96C24 671 aaPredicted RBP8.27□□□□□ -1.09
TRIM16-207ENST00000494759 TRIM37O94972 964 aa8.26□□□□□ -1.09
TRIM16-207ENST00000494759 MTHFSDQ2M296 383 aaKnown RBP8.26□□□□□ -1.09
TRIM16-207ENST00000494759 CCDC184Q52MB2 194 aa8.26□□□□□ -1.09
TRIM16-207ENST00000494759 AKAP4Q5JQC9 854 aa8.26□□□□□ -1.09
TRIM16-207ENST00000494759 CCDC125Q86Z20 511 aa8.26□□□□□ -1.09
TRIM16-207ENST00000494759 ACSBG1Q96GR2 724 aa8.26□□□□□ -1.09
TRIM16-207ENST00000494759 ADAMTS8Q9UP79 889 aa8.26□□□□□ -1.09
TRIM16-207ENST00000494759 BCL9O00512 1426 aa8.26□□□□□ -1.09
TRIM16-207ENST00000494759 KAT6BQ8WYB5 2073 aa8.26□□□□□ -1.09
TRIM16-207ENST00000494759 DOT1LQ8TEK3 1739 aa8.26□□□□□ -1.09
TRIM16-207ENST00000494759 GNAT3A8MTJ3 354 aa8.25□□□□□ -1.09
TRIM16-207ENST00000494759 CCER2I3L3R5 266 aa8.25□□□□□ -1.09
TRIM16-207ENST00000494759 CCDC146Q8IYE0 955 aa8.25□□□□□ -1.09
TRIM16-207ENST00000494759 FAM9BQ8IZU0 186 aa8.25□□□□□ -1.09
TRIM16-207ENST00000494759 RTF1Q92541 710 aaKnown RBP8.25□□□□□ -1.09
TRIM16-207ENST00000494759 UPF1Q92900 1129 aaKnown RBP eCLIP8.25□□□□□ -1.09
TRIM16-207ENST00000494759 DCAF5Q96JK2 942 aa8.25□□□□□ -1.09
TRIM16-207ENST00000494759 PHACTR3Q96KR7 559 aa8.25□□□□□ -1.09
TRIM16-207ENST00000494759 SBF2Q86WG5 1849 aa8.24□□□□□ -1.09
TRIM16-207ENST00000494759 NHSQ6T4R5 1651 aa8.24□□□□□ -1.09
TRIM16-207ENST00000494759 MAP3K5Q99683 1374 aa8.24□□□□□ -1.09
TRIM16-207ENST00000494759 SOCS7O14512 581 aa8.24□□□□□ -1.09
TRIM16-207ENST00000494759 APBA3O96018 575 aa8.24□□□□□ -1.09
TRIM16-207ENST00000494759 BAG6P46379 1132 aa8.24□□□□□ -1.09
TRIM16-207ENST00000494759 NKX1-1Q15270 411 aaPredicted RBP8.24□□□□□ -1.09
TRIM16-207ENST00000494759 MPRIPQ6WCQ1 1025 aa8.24□□□□□ -1.09
TRIM16-207ENST00000494759 MIER1Q8N108 512 aa8.24□□□□□ -1.09
TRIM16-207ENST00000494759 PNISRQ8TF01 805 aaKnown RBP8.24□□□□□ -1.09
TRIM16-207ENST00000494759 RUNDC1Q96C34 613 aa8.24□□□□□ -1.09
TRIM16-207ENST00000494759 BCL11BQ9C0K0 894 aaPredicted RBP8.24□□□□□ -1.09
TRIM16-207ENST00000494759 ERVV-2B6SEH9 535 aa8.23□□□□□ -1.09
TRIM16-207ENST00000494759 KCNQ2O43526 872 aa8.23□□□□□ -1.09
TRIM16-207ENST00000494759 PRIM1P49642 420 aaKnown RBP8.23□□□□□ -1.09
TRIM16-207ENST00000494759 CABP4P57796 275 aa8.23□□□□□ -1.09
TRIM16-207ENST00000494759 NFE2L2Q16236 605 aa8.23□□□□□ -1.09
TRIM16-207ENST00000494759 PLEKHF1Q96S99 279 aa8.23□□□□□ -1.09
TRIM16-207ENST00000494759 TMOD3Q9NYL9 352 aa8.23□□□□□ -1.09
TRIM16-207ENST00000494759 TNS1Q9HBL0 1735 aaKnown RBP8.23□□□□□ -1.09
TRIM16-207ENST00000494759 KDM6AO15550 1401 aaPredicted RBP8.22□□□□□ -1.09
TRIM16-207ENST00000494759 RNMTO43148 476 aaKnown RBP8.22□□□□□ -1.09
TRIM16-207ENST00000494759 LMOD3Q0VAK6 560 aa8.22□□□□□ -1.09
TRIM16-207ENST00000494759 TEFQ10587 303 aa8.22□□□□□ -1.09
TRIM16-207ENST00000494759 NEUROD2Q15784 382 aa8.22□□□□□ -1.09
TRIM16-207ENST00000494759 TOGARAM1Q9Y4F4 1720 aa8.22□□□□□ -1.09
TRIM16-207ENST00000494759 SCN11AQ9UI33 1791 aa8.22□□□□□ -1.09
TRIM16-207ENST00000494759 BTAF1O14981 1849 aa8.22□□□□□ -1.09
TRIM16-207ENST00000494759 HTATSF1O43719 755 aaKnown RBP8.21□□□□□ -1.1
TRIM16-207ENST00000494759 RIPK4P57078 832 aa8.21□□□□□ -1.1
TRIM16-207ENST00000494759 RRP7AQ9Y3A4 280 aaKnown RBP8.21□□□□□ -1.1
TRIM16-207ENST00000494759 ITGB4P16144 1822 aa8.21□□□□□ -1.1
TRIM16-207ENST00000494759 VIRMAQ69YN4 1812 aaKnown RBP8.21□□□□□ -1.1
TRIM16-207ENST00000494759 DLG5Q8TDM6 1919 aa8.21□□□□□ -1.1
TRIM16-207ENST00000494759 APAF1O14727 1248 aa8.2□□□□□ -1.1
TRIM16-207ENST00000494759 TMPOP42166 694 aaKnown RBP8.2□□□□□ -1.1
TRIM16-207ENST00000494759 EN1Q05925 392 aaPredicted RBP8.2□□□□□ -1.1
TRIM16-207ENST00000494759 MCM10Q7L590 875 aa8.2□□□□□ -1.1
TRIM16-207ENST00000494759 PTF1AQ7RTS3 328 aa8.2□□□□□ -1.1
TRIM16-207ENST00000494759 DEFB132Q7Z7B7 95 aa8.2□□□□□ -1.1
TRIM16-207ENST00000494759 NFATC2IPQ8NCF5 419 aa8.2□□□□□ -1.1
TRIM16-207ENST00000494759 PIGBQ92521 554 aa8.2□□□□□ -1.1
TRIM16-207ENST00000494759 SMARCC1Q92922 1105 aaPredicted RBP8.2□□□□□ -1.1
TRIM16-207ENST00000494759 SLC52A2Q9HAB3 445 aa8.2□□□□□ -1.1
TRIM16-207ENST00000494759 LGR6Q9HBX8 967 aa8.2□□□□□ -1.1
TRIM16-207ENST00000494759 ADAMTS7Q9UKP4 1686 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms