RNA–Protein interactions for RNA: ENST00000494306.1

COX5B-204, Transcript of cytochrome c oxidase subunit 5B, humanhuman

TSL 2

Gene COX5B, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX5B-204ENST00000494306 COG3Q96JB2 828 aa17.27■□□□□ 0.36
COX5B-204ENST00000494306 KAT6BQ8WYB5 2073 aa17.27■□□□□ 0.35
COX5B-204ENST00000494306 TONSLQ96HA7 1378 aa17.27■□□□□ 0.35
COX5B-204ENST00000494306 ST20-MTHFSA0A0A6YYL1 179 aa17.26■□□□□ 0.35
COX5B-204ENST00000494306 KCNQ4P56696 695 aa17.26■□□□□ 0.35
COX5B-204ENST00000494306 ANKRD36BQ8N2N9 1353 aa17.26■□□□□ 0.35
COX5B-204ENST00000494306 ZCRB1Q8TBF4 217 aaKnown RBP17.25■□□□□ 0.35
COX5B-204ENST00000494306 SYTL4Q96C24 671 aaPredicted RBP17.25■□□□□ 0.35
COX5B-204ENST00000494306 FAM208AQ9UK61 1670 aaKnown RBP17.25■□□□□ 0.35
COX5B-204ENST00000494306 NSD2O96028 1365 aa17.25■□□□□ 0.35
COX5B-204ENST00000494306 AMPHP49418 695 aa17.24■□□□□ 0.35
COX5B-204ENST00000494306 TFCP2L1Q9NZI6 479 aa17.24■□□□□ 0.35
COX5B-204ENST00000494306 POLD1P28340 1107 aa17.23■□□□□ 0.35
COX5B-204ENST00000494306 GPR162Q16538 588 aa17.23■□□□□ 0.35
COX5B-204ENST00000494306 QSER1Q2KHR3 1735 aa17.23■□□□□ 0.35
COX5B-204ENST00000494306 COL24A1Q17RW2 1714 aa17.22■□□□□ 0.35
COX5B-204ENST00000494306 SLC24A1O60721 1099 aa17.22■□□□□ 0.35
COX5B-204ENST00000494306 NBPF6Q5VWK0 638 aa17.22■□□□□ 0.35
COX5B-204ENST00000494306 NBPF4Q96M43 638 aa17.22■□□□□ 0.35
COX5B-204ENST00000494306 MEGF6O75095 1541 aa17.21■□□□□ 0.35
COX5B-204ENST00000494306 CHD4Q14839 1912 aa17.21■□□□□ 0.35
COX5B-204ENST00000494306 FYB1O15117 783 aa17.2■□□□□ 0.34
COX5B-204ENST00000494306 RRS1Q15050 365 aaKnown RBP17.2■□□□□ 0.34
COX5B-204ENST00000494306 LY75O60449 1722 aa17.19■□□□□ 0.34
COX5B-204ENST00000494306 DOT1LQ8TEK3 1739 aa17.19■□□□□ 0.34
COX5B-204ENST00000494306 SHANK3Q9BYB0 1731 aa17.19■□□□□ 0.34
COX5B-204ENST00000494306 RTL1A6NKG5 1358 aa17.19■□□□□ 0.34
COX5B-204ENST00000494306 KLHL34Q8N239 644 aa17.19■□□□□ 0.34
COX5B-204ENST00000494306 CCNL1Q9UK58 526 aaPredicted RBP17.19■□□□□ 0.34
COX5B-204ENST00000494306 RGPD2P0DJD1 1756 aa17.19■□□□□ 0.34
COX5B-204ENST00000494306 GOLGB1Q14789 3259 aaKnown RBP17.18■□□□□ 0.34
COX5B-204ENST00000494306 C1QTNF8P60827 252 aa17.18■□□□□ 0.34
COX5B-204ENST00000494306 USHBP1Q8N6Y0 703 aa17.18■□□□□ 0.34
COX5B-204ENST00000494306 NLGN2Q8NFZ4 835 aa17.18■□□□□ 0.34
COX5B-204ENST00000494306 GGNBP2Q9H3C7 697 aa17.18■□□□□ 0.34
COX5B-204ENST00000494306 TUBGCP6Q96RT7 1819 aa17.18■□□□□ 0.34
COX5B-204ENST00000494306 CGNL1Q0VF96 1302 aa17.18■□□□□ 0.34
COX5B-204ENST00000494306 COL23A1Q86Y22 540 aaPredicted RBP17.17■□□□□ 0.34
COX5B-204ENST00000494306 RAPGEF4Q8WZA2 1011 aa17.16■□□□□ 0.34
COX5B-204ENST00000494306 USP47Q96K76 1375 aa17.15■□□□□ 0.34
COX5B-204ENST00000494306 HSP90AB2PQ58FF8 381 aa17.15■□□□□ 0.34
COX5B-204ENST00000494306 TATP17735 454 aaPredicted RBP17.14■□□□□ 0.33
COX5B-204ENST00000494306 TMF1P82094 1093 aa17.14■□□□□ 0.33
COX5B-204ENST00000494306 PELP1Q8IZL8 1130 aaKnown RBP17.14■□□□□ 0.33
COX5B-204ENST00000494306 INSRP06213 1382 aa17.14■□□□□ 0.33
COX5B-204ENST00000494306 SENP3-EIF4A1A0A087X0R7 540 aa17.13■□□□□ 0.33
COX5B-204ENST00000494306 SMG6Q86US8 1419 aaKnown RBP17.13■□□□□ 0.33
COX5B-204ENST00000494306 YBX3P16989 372 aaKnown RBP eCLIP17.12■□□□□ 0.33
COX5B-204ENST00000494306 PCDH11XQ9BZA7 1347 aa17.11■□□□□ 0.33
COX5B-204ENST00000494306 PCDH11YQ9BZA8 1340 aa17.11■□□□□ 0.33
COX5B-204ENST00000494306 CYP27B1O15528 508 aa17.1■□□□□ 0.33
COX5B-204ENST00000494306 GRIN3BO60391 1043 aa17.1■□□□□ 0.33
COX5B-204ENST00000494306 MSL1Q68DK7 614 aa17.1■□□□□ 0.33
COX5B-204ENST00000494306 CARD14Q9BXL6 1004 aa17.1■□□□□ 0.33
COX5B-204ENST00000494306 FLT4P35916 1363 aa17.1■□□□□ 0.33
COX5B-204ENST00000494306 KIF24Q5T7B8 1368 aa17.1■□□□□ 0.33
COX5B-204ENST00000494306 MPRIPQ6WCQ1 1025 aa17.09■□□□□ 0.33
COX5B-204ENST00000494306 PALLDQ8WX93 1383 aa17.08■□□□□ 0.32
COX5B-204ENST00000494306 GIGYF1O75420 1035 aaPredicted RBP17.08■□□□□ 0.32
COX5B-204ENST00000494306 HMGB2P26583 209 aaKnown RBP17.08■□□□□ 0.32
COX5B-204ENST00000494306 FLAD1Q8NFF5 587 aa17.08■□□□□ 0.32
COX5B-204ENST00000494306 CDCA8Q53HL2 280 aa17.07■□□□□ 0.32
COX5B-204ENST00000494306 CD2APQ9Y5K6 639 aa17.07■□□□□ 0.32
COX5B-204ENST00000494306 C5P01031 1676 aa17.07■□□□□ 0.32
COX5B-204ENST00000494306 SLC4A2P04920 1241 aa17.06■□□□□ 0.32
COX5B-204ENST00000494306 EMILIN1Q9Y6C2 1016 aa17.06■□□□□ 0.32
COX5B-204ENST00000494306 HOXD11P31277 338 aaPredicted RBP17.05■□□□□ 0.32
COX5B-204ENST00000494306 NKX1-1Q15270 411 aaPredicted RBP17.05■□□□□ 0.32
COX5B-204ENST00000494306 AMIGO3Q86WK7 504 aa17.05■□□□□ 0.32
COX5B-204ENST00000494306 PIGBQ92521 554 aa17.05■□□□□ 0.32
COX5B-204ENST00000494306 SMARCC1Q92922 1105 aaPredicted RBP17.05■□□□□ 0.32
COX5B-204ENST00000494306 KIF20BQ96Q89 1820 aa17.04■□□□□ 0.32
COX5B-204ENST00000494306 NCAPD2Q15021 1401 aa17.04■□□□□ 0.32
COX5B-204ENST00000494306 TAF1LQ8IZX4 1826 aa17.03■□□□□ 0.32
COX5B-204ENST00000494306 SMIM5Q71RC9 77 aa17.03■□□□□ 0.32
COX5B-204ENST00000494306 TOGARAM1Q9Y4F4 1720 aa17.02■□□□□ 0.32
COX5B-204ENST00000494306 AK7Q96M32 723 aa17.02■□□□□ 0.32
COX5B-204ENST00000494306 NSD3Q9BZ95 1437 aa17.02■□□□□ 0.31
COX5B-204ENST00000494306 C4BP0C0L5 1744 aa17.01■□□□□ 0.31
COX5B-204ENST00000494306 WASHC2AQ641Q2 1341 aa17.01■□□□□ 0.31
COX5B-204ENST00000494306 SPG7Q9UQ90 795 aa17.01■□□□□ 0.31
COX5B-204ENST00000494306 PKD1L3Q7Z443 1732 aa17.01■□□□□ 0.31
COX5B-204ENST00000494306 ITGB4P16144 1822 aa17■□□□□ 0.31
COX5B-204ENST00000494306 PPM1GO15355 546 aaPredicted RBP17■□□□□ 0.31
COX5B-204ENST00000494306 EYA1Q99502 592 aa17■□□□□ 0.31
COX5B-204ENST00000494306 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17■□□□□ 0.31
COX5B-204ENST00000494306 CEP350Q5VT06 3117 aa16.99■□□□□ 0.31
COX5B-204ENST00000494306 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.99■□□□□ 0.31
COX5B-204ENST00000494306 LOC102724428A0A0B4J2F2 783 aa16.99■□□□□ 0.31
COX5B-204ENST00000494306 PHF14O94880 888 aa16.99■□□□□ 0.31
COX5B-204ENST00000494306 SIK1P57059 783 aa16.99■□□□□ 0.31
COX5B-204ENST00000494306 LINC00116Q8NCU8 138 aa16.99■□□□□ 0.31
COX5B-204ENST00000494306 ATP10DQ9P241 1426 aa16.98■□□□□ 0.31
COX5B-204ENST00000494306 SSFA2P28290 1259 aa16.98■□□□□ 0.31
COX5B-204ENST00000494306 ASAP1Q9ULH1 1129 aa16.98■□□□□ 0.31
COX5B-204ENST00000494306 ITPK1Q13572 414 aa16.97■□□□□ 0.31
COX5B-204ENST00000494306 POLKQ9UBT6 870 aa16.97■□□□□ 0.31
COX5B-204ENST00000494306 MAP2P11137 1827 aaKnown RBP16.97■□□□□ 0.31
COX5B-204ENST00000494306 UBR3Q6ZT12 1888 aa16.97■□□□□ 0.31
COX5B-204ENST00000494306 PHKG2P15735 406 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms