RNA–Protein interactions for RNA: ENST00000494014.1

EPHA3-203, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 3,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-203ENST00000494014 PRAM1Q96QH2 718 aa8.86□□□□□ -0.99
EPHA3-203ENST00000494014 PRR36Q9H6K5 1346 aa8.85□□□□□ -0.99
EPHA3-203ENST00000494014 NCBP3Q53F19 620 aaKnown RBP8.85□□□□□ -0.99
EPHA3-203ENST00000494014 FOXO3O43524 673 aa8.85□□□□□ -0.99
EPHA3-203ENST00000494014 FAM13BQ9NYF5 915 aa8.85□□□□□ -0.99
EPHA3-203ENST00000494014 NUP188Q5SRE5 1749 aa8.85□□□□□ -0.99
EPHA3-203ENST00000494014 ZNF521Q96K83 1311 aa8.85□□□□□ -0.99
EPHA3-203ENST00000494014 TNNT2P45379 298 aaPredicted RBP8.84□□□□□ -0.99
EPHA3-203ENST00000494014 DMTNQ08495 405 aa8.84□□□□□ -0.99
EPHA3-203ENST00000494014 PDE3AQ14432 1141 aa8.84□□□□□ -0.99
EPHA3-203ENST00000494014 TMEM132EQ6IEE7 984 aa8.84□□□□□ -0.99
EPHA3-203ENST00000494014 GBP4Q96PP9 640 aa8.84□□□□□ -0.99
EPHA3-203ENST00000494014 CIZ1Q9ULV3 898 aaPredicted RBP8.84□□□□□ -0.99
EPHA3-203ENST00000494014 IBTKQ9P2D0 1353 aaPredicted RBP8.84□□□□□ -0.99
EPHA3-203ENST00000494014 ST20-MTHFSA0A0A6YYL1 179 aa8.84□□□□□ -0.99
EPHA3-203ENST00000494014 CSPP1Q1MSJ5 1256 aa8.84□□□□□ -0.99
EPHA3-203ENST00000494014 SPATA31A5Q5VU36 1347 aa8.84□□□□□ -0.99
EPHA3-203ENST00000494014 SPATA31A7Q8IWB4 1347 aa8.84□□□□□ -0.99
EPHA3-203ENST00000494014 PER1O15534 1290 aaPredicted RBP8.84□□□□□ -0.99
EPHA3-203ENST00000494014 PIK3C2AO00443 1686 aa8.83□□□□□ -1
EPHA3-203ENST00000494014 ZNF500O60304 480 aaPredicted RBP8.83□□□□□ -1
EPHA3-203ENST00000494014 ADAMTS2O95450 1211 aa8.83□□□□□ -1
EPHA3-203ENST00000494014 PMFBP1Q8TBY8 1022 aa8.83□□□□□ -1
EPHA3-203ENST00000494014 FAM208AQ9UK61 1670 aaKnown RBP8.83□□□□□ -1
EPHA3-203ENST00000494014 SBF2Q86WG5 1849 aa8.82□□□□□ -1
EPHA3-203ENST00000494014 IGHDP01880 384 aa8.82□□□□□ -1
EPHA3-203ENST00000494014 SLFN5Q08AF3 891 aa8.82□□□□□ -1
EPHA3-203ENST00000494014 RGL3Q3MIN7 710 aa8.82□□□□□ -1
EPHA3-203ENST00000494014 BARGINQ6ZT62 677 aa8.82□□□□□ -1
EPHA3-203ENST00000494014 HSCBQ8IWL3 235 aa8.82□□□□□ -1
EPHA3-203ENST00000494014 CLUAP1Q96AJ1 413 aa8.82□□□□□ -1
EPHA3-203ENST00000494014 LRRC37A3O60309 1634 aa8.82□□□□□ -1
EPHA3-203ENST00000494014 UQCRHLA0A096LP55 91 aa8.82□□□□□ -1
EPHA3-203ENST00000494014 UQCRHP07919 91 aa8.82□□□□□ -1
EPHA3-203ENST00000494014 NASPP49321 788 aaPredicted RBP8.82□□□□□ -1
EPHA3-203ENST00000494014 TRMT2AQ8IZ69 625 aaKnown RBP8.82□□□□□ -1
EPHA3-203ENST00000494014 R3HCC1Q9Y3T6 440 aaKnown RBP8.82□□□□□ -1
EPHA3-203ENST00000494014 KIF20AO95235 890 aa8.82□□□□□ -1
EPHA3-203ENST00000494014 GAS2L3Q86XJ1 694 aa8.82□□□□□ -1
EPHA3-203ENST00000494014 STK26Q9P289 416 aa8.82□□□□□ -1
EPHA3-203ENST00000494014 COL24A1Q17RW2 1714 aa8.81□□□□□ -1
EPHA3-203ENST00000494014 QSER1Q2KHR3 1735 aa8.81□□□□□ -1
EPHA3-203ENST00000494014 MCM5P33992 734 aa8.81□□□□□ -1
EPHA3-203ENST00000494014 ZNF692Q9BU19 519 aaPredicted RBP8.81□□□□□ -1
EPHA3-203ENST00000494014 CCDC94Q9BW85 323 aaPredicted RBP8.81□□□□□ -1
EPHA3-203ENST00000494014 GTPBP4Q9BZE4 634 aaKnown RBP8.81□□□□□ -1
EPHA3-203ENST00000494014 THRAP3Q9Y2W1 955 aaKnown RBP8.81□□□□□ -1
EPHA3-203ENST00000494014 WDR43Q15061 677 aaKnown RBP eCLIP8.8□□□□□ -1
EPHA3-203ENST00000494014 PUS7Q96PZ0 661 aaKnown RBP8.8□□□□□ -1
EPHA3-203ENST00000494014 NOL7Q9UMY1 257 aaKnown RBP8.8□□□□□ -1
EPHA3-203ENST00000494014 FAM83GA6ND36 823 aa8.8□□□□□ -1
EPHA3-203ENST00000494014 CANXP27824 592 aaKnown RBP8.8□□□□□ -1
EPHA3-203ENST00000494014 DDIT3P35638 169 aa8.8□□□□□ -1
EPHA3-203ENST00000494014 NGEFQ8N5V2 710 aa8.8□□□□□ -1
EPHA3-203ENST00000494014 ZRANB1Q9UGI0 708 aa8.8□□□□□ -1
EPHA3-203ENST00000494014 NFAT5O94916 1531 aa8.79□□□□□ -1
EPHA3-203ENST00000494014 SASS6Q6UVJ0 657 aa8.79□□□□□ -1
EPHA3-203ENST00000494014 C22orf23Q9BZE7 217 aa8.79□□□□□ -1
EPHA3-203ENST00000494014 ADAMTS8Q9UP79 889 aa8.79□□□□□ -1
EPHA3-203ENST00000494014 SPATA31A1Q5TZJ5 1347 aa8.79□□□□□ -1
EPHA3-203ENST00000494014 USP6P35125 1406 aa8.79□□□□□ -1
EPHA3-203ENST00000494014 CASZ1Q86V15 1759 aa8.79□□□□□ -1
EPHA3-203ENST00000494014 PDIA4P13667 645 aaKnown RBP8.79□□□□□ -1
EPHA3-203ENST00000494014 BBXQ8WY36 941 aaPredicted RBP8.79□□□□□ -1
EPHA3-203ENST00000494014 ZHX1Q9UKY1 873 aaPredicted RBP8.79□□□□□ -1
EPHA3-203ENST00000494014 CAMTA1Q9Y6Y1 1673 aa8.79□□□□□ -1
EPHA3-203ENST00000494014 LETM1O95202 739 aaPredicted RBP8.79□□□□□ -1
EPHA3-203ENST00000494014 SEPT12Q8IYM1 358 aa8.79□□□□□ -1
EPHA3-203ENST00000494014 SPRYD3Q8NCJ5 442 aa8.79□□□□□ -1
EPHA3-203ENST00000494014 AATKQ6ZMQ8 1374 aa8.79□□□□□ -1
EPHA3-203ENST00000494014 CPSF1Q10570 1443 aaKnown RBP8.79□□□□□ -1
EPHA3-203ENST00000494014 COL5A2P05997 1499 aaPredicted RBP8.78□□□□□ -1
EPHA3-203ENST00000494014 GOLGA6L22H0YM25 854 aa8.78□□□□□ -1
EPHA3-203ENST00000494014 TAF3Q5VWG9 929 aa8.78□□□□□ -1
EPHA3-203ENST00000494014 KRT27Q7Z3Y8 459 aa8.78□□□□□ -1
EPHA3-203ENST00000494014 SMC5Q8IY18 1101 aa8.78□□□□□ -1
EPHA3-203ENST00000494014 SNX21Q969T3 373 aa8.78□□□□□ -1
EPHA3-203ENST00000494014 CCDC61Q9Y6R9 512 aa8.78□□□□□ -1
EPHA3-203ENST00000494014 TNPO1Q92973 898 aaKnown RBP8.78□□□□□ -1
EPHA3-203ENST00000494014 NUDT16Q96DE0 195 aaKnown RBP8.78□□□□□ -1
EPHA3-203ENST00000494014 USP31Q70CQ4 1352 aa8.77□□□□□ -1
EPHA3-203ENST00000494014 E9PSI1 815 aa8.77□□□□□ -1
EPHA3-203ENST00000494014 ZSCAN20P17040 1043 aaPredicted RBP8.77□□□□□ -1
EPHA3-203ENST00000494014 RAB3GAP1Q15042 981 aa8.77□□□□□ -1
EPHA3-203ENST00000494014 CC2D1BQ5T0F9 858 aaKnown RBP8.77□□□□□ -1
EPHA3-203ENST00000494014 NHSQ6T4R5 1651 aa8.77□□□□□ -1.01
EPHA3-203ENST00000494014 PPIP5K1Q6PFW1 1433 aa8.77□□□□□ -1.01
EPHA3-203ENST00000494014 GTF2E1P29083 439 aaPredicted RBP8.76□□□□□ -1.01
EPHA3-203ENST00000494014 PDLIM2Q96JY6 352 aa8.76□□□□□ -1.01
EPHA3-203ENST00000494014 ZKSCAN5Q9Y2L8 839 aa8.76□□□□□ -1.01
EPHA3-203ENST00000494014 KLHL40Q2TBA0 621 aa8.76□□□□□ -1.01
EPHA3-203ENST00000494014 PPP4R3BQ5MIZ7 849 aa8.76□□□□□ -1.01
EPHA3-203ENST00000494014 PDZRN3Q9UPQ7 1066 aa8.76□□□□□ -1.01
EPHA3-203ENST00000494014 CRB1P82279 1406 aa8.76□□□□□ -1.01
EPHA3-203ENST00000494014 TTC21AQ8NDW8 1320 aa8.75□□□□□ -1.01
EPHA3-203ENST00000494014 ZNF445P59923 1031 aa8.75□□□□□ -1.01
EPHA3-203ENST00000494014 RWDD1Q9H446 243 aaPredicted RBP8.75□□□□□ -1.01
EPHA3-203ENST00000494014 TRAK1Q9UPV9 953 aa8.75□□□□□ -1.01
EPHA3-203ENST00000494014 BCAR3O75815 825 aa8.75□□□□□ -1.01
EPHA3-203ENST00000494014 CLEC17AQ6ZS10 378 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms