RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 ADGRL3Q9HAR2 1447 aa17.45■□□□□ 0.38
VCP-207ENST00000493886 ARHGAP45Q92619 1136 aa17.44■□□□□ 0.38
VCP-207ENST00000493886 KDRP35968 1356 aa17.44■□□□□ 0.38
VCP-207ENST00000493886 NFKBIBQ15653 356 aa17.44■□□□□ 0.38
VCP-207ENST00000493886 MCM10Q7L590 875 aa17.44■□□□□ 0.38
VCP-207ENST00000493886 ZBTB40Q9NUA8 1239 aa17.44■□□□□ 0.38
VCP-207ENST00000493886 IGSF1Q8N6C5 1336 aa17.44■□□□□ 0.38
VCP-207ENST00000493886 GLIPR1L2Q4G1C9 344 aa17.44■□□□□ 0.38
VCP-207ENST00000493886 EYA1Q99502 592 aa17.44■□□□□ 0.38
VCP-207ENST00000493886 KIF24Q5T7B8 1368 aa17.43■□□□□ 0.38
VCP-207ENST00000493886 HDAC1Q13547 482 aaPredicted RBP17.43■□□□□ 0.38
VCP-207ENST00000493886 HOXC9P31274 260 aa17.42■□□□□ 0.38
VCP-207ENST00000493886 CHL1O00533 1208 aa17.42■□□□□ 0.38
VCP-207ENST00000493886 C14orf37Q86TY3 774 aa17.42■□□□□ 0.38
VCP-207ENST00000493886 USP35Q9P2H5 1018 aa17.42■□□□□ 0.38
VCP-207ENST00000493886 MTHFSDQ2M296 383 aaKnown RBP17.41■□□□□ 0.38
VCP-207ENST00000493886 FOXO3O43524 673 aa17.4■□□□□ 0.38
VCP-207ENST00000493886 SEC24BO95487 1268 aa17.4■□□□□ 0.38
VCP-207ENST00000493886 ESCO1Q5FWF5 840 aa17.4■□□□□ 0.38
VCP-207ENST00000493886 VIRMAQ69YN4 1812 aaKnown RBP17.39■□□□□ 0.38
VCP-207ENST00000493886 CRB1P82279 1406 aa17.39■□□□□ 0.37
VCP-207ENST00000493886 ABCC4O15439 1325 aa17.38■□□□□ 0.37
VCP-207ENST00000493886 GAS2L2Q8NHY3 880 aa17.38■□□□□ 0.37
VCP-207ENST00000493886 RTF1Q92541 710 aaKnown RBP17.38■□□□□ 0.37
VCP-207ENST00000493886 KIAA0232Q92628 1395 aa17.38■□□□□ 0.37
VCP-207ENST00000493886 HAP1P54257 671 aaPredicted RBP17.37■□□□□ 0.37
VCP-207ENST00000493886 PSME1Q06323 249 aa17.37■□□□□ 0.37
VCP-207ENST00000493886 CHMP4BQ9H444 224 aaKnown RBP17.37■□□□□ 0.37
VCP-207ENST00000493886 ZBTB7BO15156 539 aaPredicted RBP17.37■□□□□ 0.37
VCP-207ENST00000493886 KRT24Q2M2I5 525 aa17.37■□□□□ 0.37
VCP-207ENST00000493886 API5Q9BZZ5 524 aaKnown RBP17.37■□□□□ 0.37
VCP-207ENST00000493886 DNAJC5Q9H3Z4 198 aa17.37■□□□□ 0.37
VCP-207ENST00000493886 FRAT2O75474 233 aaPredicted RBP17.36■□□□□ 0.37
VCP-207ENST00000493886 SMC5Q8IY18 1101 aa17.36■□□□□ 0.37
VCP-207ENST00000493886 NWD1Q149M9 1564 aa17.36■□□□□ 0.37
VCP-207ENST00000493886 RTL1A6NKG5 1358 aa17.36■□□□□ 0.37
VCP-207ENST00000493886 LTV1Q96GA3 475 aaPredicted RBP17.35■□□□□ 0.37
VCP-207ENST00000493886 LTN1O94822 1766 aa17.34■□□□□ 0.37
VCP-207ENST00000493886 NFAT5O94916 1531 aa17.33■□□□□ 0.37
VCP-207ENST00000493886 MIS18AQ9NYP9 233 aa17.33■□□□□ 0.37
VCP-207ENST00000493886 HTATSF1O43719 755 aaKnown RBP17.33■□□□□ 0.36
VCP-207ENST00000493886 IP6K1Q92551 441 aa17.33■□□□□ 0.36
VCP-207ENST00000493886 ORAI2Q96SN7 254 aa17.33■□□□□ 0.36
VCP-207ENST00000493886 TSPYL4Q9UJ04 414 aa17.33■□□□□ 0.36
VCP-207ENST00000493886 GSE1Q14687 1217 aa17.32■□□□□ 0.36
VCP-207ENST00000493886 BRPF3Q9ULD4 1205 aa17.32■□□□□ 0.36
VCP-207ENST00000493886 USP19O94966 1318 aa17.32■□□□□ 0.36
VCP-207ENST00000493886 SLKQ9H2G2 1235 aaPredicted RBP17.32■□□□□ 0.36
VCP-207ENST00000493886 PROSER2Q86WR7 435 aaPredicted RBP17.31■□□□□ 0.36
VCP-207ENST00000493886 KCNH5Q8NCM2 988 aa17.31■□□□□ 0.36
VCP-207ENST00000493886 GNAT3A8MTJ3 354 aa17.31■□□□□ 0.36
VCP-207ENST00000493886 C1orf115Q9H7X2 142 aa17.31■□□□□ 0.36
VCP-207ENST00000493886 USHBP1Q8N6Y0 703 aa17.29■□□□□ 0.36
VCP-207ENST00000493886 LRRC37A3O60309 1634 aa17.29■□□□□ 0.36
VCP-207ENST00000493886 NUCB1Q02818 461 aa17.29■□□□□ 0.36
VCP-207ENST00000493886 MAP3K5Q99683 1374 aa17.28■□□□□ 0.36
VCP-207ENST00000493886 XPCQ01831 940 aaPredicted RBP17.28■□□□□ 0.36
VCP-207ENST00000493886 INTS3Q68E01 1043 aaKnown RBP17.28■□□□□ 0.36
VCP-207ENST00000493886 RGS12O14924 1447 aa17.28■□□□□ 0.36
VCP-207ENST00000493886 PTPRCP08575 1304 aa17.28■□□□□ 0.36
VCP-207ENST00000493886 MSH6P52701 1360 aa17.27■□□□□ 0.36
VCP-207ENST00000493886 ZBTB7CA1YPR0 619 aa17.27■□□□□ 0.36
VCP-207ENST00000493886 SLC4A2P04920 1241 aa17.26■□□□□ 0.35
VCP-207ENST00000493886 NBPF6Q5VWK0 638 aa17.26■□□□□ 0.35
VCP-207ENST00000493886 SIRT2Q8IXJ6 389 aa17.26■□□□□ 0.35
VCP-207ENST00000493886 IL17REQ8NFR9 667 aa17.26■□□□□ 0.35
VCP-207ENST00000493886 GCC1Q96CN9 775 aa17.26■□□□□ 0.35
VCP-207ENST00000493886 NBPF4Q96M43 638 aa17.26■□□□□ 0.35
VCP-207ENST00000493886 PHRF1Q9P1Y6 1649 aaKnown RBP17.26■□□□□ 0.35
VCP-207ENST00000493886 CHD1LQ86WJ1 897 aa17.26■□□□□ 0.35
VCP-207ENST00000493886 C19orf44Q9H6X5 657 aa17.26■□□□□ 0.35
VCP-207ENST00000493886 GCP02774 474 aa17.25■□□□□ 0.35
VCP-207ENST00000493886 LNPKQ9C0E8 428 aa17.25■□□□□ 0.35
VCP-207ENST00000493886 C1orf167Q5SNV9 1468 aa17.25■□□□□ 0.35
VCP-207ENST00000493886 SPRYD3Q8NCJ5 442 aa17.25■□□□□ 0.35
VCP-207ENST00000493886 SLIT3O75094 1523 aa17.24■□□□□ 0.35
VCP-207ENST00000493886 LMOD2Q6P5Q4 547 aa17.24■□□□□ 0.35
VCP-207ENST00000493886 KRT28Q7Z3Y7 464 aa17.24■□□□□ 0.35
VCP-207ENST00000493886 TAF7LQ5H9L4 462 aa17.23■□□□□ 0.35
VCP-207ENST00000493886 ARHGEF25Q86VW2 580 aa17.23■□□□□ 0.35
VCP-207ENST00000493886 TRPM3Q9HCF6 1732 aaPredicted RBP17.23■□□□□ 0.35
VCP-207ENST00000493886 TAF7Q15545 349 aaPredicted RBP17.23■□□□□ 0.35
VCP-207ENST00000493886 ANKRD45Q5TZF3 282 aa17.23■□□□□ 0.35
VCP-207ENST00000493886 UPF2Q9HAU5 1272 aaKnown RBP17.23■□□□□ 0.35
VCP-207ENST00000493886 KIF1AQ12756 1690 aa17.22■□□□□ 0.35
VCP-207ENST00000493886 BABAM1Q9NWV8 329 aa17.22■□□□□ 0.35
VCP-207ENST00000493886 PAXIP1Q6ZW49 1069 aaPredicted RBP17.22■□□□□ 0.35
VCP-207ENST00000493886 G2E3Q7L622 706 aa17.21■□□□□ 0.35
VCP-207ENST00000493886 LRRC59Q96AG4 307 aaKnown RBP17.21■□□□□ 0.35
VCP-207ENST00000493886 RGPD2P0DJD1 1756 aa17.21■□□□□ 0.35
VCP-207ENST00000493886 ARXQ96QS3 562 aa17.2■□□□□ 0.34
VCP-207ENST00000493886 STK31Q9BXU1 1019 aa17.2■□□□□ 0.34
VCP-207ENST00000493886 CCDC30Q5VVM6 783 aa17.19■□□□□ 0.34
VCP-207ENST00000493886 TBC1D32Q96NH3 1257 aa17.19■□□□□ 0.34
VCP-207ENST00000493886 TMEM94Q12767 1356 aa17.19■□□□□ 0.34
VCP-207ENST00000493886 CEMIPQ8WUJ3 1361 aa17.19■□□□□ 0.34
VCP-207ENST00000493886 SOS1Q07889 1333 aaPredicted RBP17.19■□□□□ 0.34
VCP-207ENST00000493886 BECN1Q14457 450 aa17.19■□□□□ 0.34
VCP-207ENST00000493886 ATF3P18847 181 aa17.18■□□□□ 0.34
VCP-207ENST00000493886 ATP10DQ9P241 1426 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms