RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 NALCNQ8IZF0 1738 aa15.63■□□□□ 0.09
HMGN1-220ENST00000492280 SSH2Q76I76 1423 aa15.62■□□□□ 0.09
HMGN1-220ENST00000492280 CHL1O00533 1208 aa15.62■□□□□ 0.09
HMGN1-220ENST00000492280 BRPF1P55201 1214 aaPredicted RBP15.62■□□□□ 0.09
HMGN1-220ENST00000492280 ZNF428Q96B54 188 aa15.62■□□□□ 0.09
HMGN1-220ENST00000492280 MEIS3Q99687 375 aa15.62■□□□□ 0.09
HMGN1-220ENST00000492280 TSPYL4Q9UJ04 414 aa15.62■□□□□ 0.09
HMGN1-220ENST00000492280 PIK3C2AO00443 1686 aa15.62■□□□□ 0.09
HMGN1-220ENST00000492280 PIK3R4Q99570 1358 aa15.62■□□□□ 0.09
HMGN1-220ENST00000492280 SMARCA5O60264 1052 aaPredicted RBP15.62■□□□□ 0.09
HMGN1-220ENST00000492280 SLC4A2P04920 1241 aa15.62■□□□□ 0.09
HMGN1-220ENST00000492280 ARXQ96QS3 562 aa15.62■□□□□ 0.09
HMGN1-220ENST00000492280 RGS12O14924 1447 aa15.62■□□□□ 0.09
HMGN1-220ENST00000492280 FMN2Q9NZ56 1722 aa15.61■□□□□ 0.09
HMGN1-220ENST00000492280 ARHGAP45Q92619 1136 aa15.61■□□□□ 0.09
HMGN1-220ENST00000492280 USP31Q70CQ4 1352 aa15.61■□□□□ 0.09
HMGN1-220ENST00000492280 XPCQ01831 940 aaPredicted RBP15.61■□□□□ 0.09
HMGN1-220ENST00000492280 GSE1Q14687 1217 aa15.61■□□□□ 0.09
HMGN1-220ENST00000492280 API5Q9BZZ5 524 aaKnown RBP15.61■□□□□ 0.09
HMGN1-220ENST00000492280 TBX22Q9Y458 520 aa15.61■□□□□ 0.09
HMGN1-220ENST00000492280 ABTB2Q8N961 1025 aa15.6■□□□□ 0.09
HMGN1-220ENST00000492280 RGPD1P0DJD0 1748 aa15.6■□□□□ 0.09
HMGN1-220ENST00000492280 FLT4P35916 1363 aa15.6■□□□□ 0.09
HMGN1-220ENST00000492280 RTF1Q92541 710 aaKnown RBP15.6■□□□□ 0.09
HMGN1-220ENST00000492280 FOXD4L1Q9NU39 408 aa15.6■□□□□ 0.09
HMGN1-220ENST00000492280 ANTXR1Q9H6X2 564 aa15.59■□□□□ 0.09
HMGN1-220ENST00000492280 ARHGAP23Q9P227 1491 aa15.59■□□□□ 0.09
HMGN1-220ENST00000492280 CRB1P82279 1406 aa15.59■□□□□ 0.09
HMGN1-220ENST00000492280 BRPF3Q9ULD4 1205 aa15.59■□□□□ 0.09
HMGN1-220ENST00000492280 SLIT1O75093 1534 aa15.59■□□□□ 0.09
HMGN1-220ENST00000492280 RBM42Q9BTD8 480 aaKnown RBP15.59■□□□□ 0.09
HMGN1-220ENST00000492280 SBNO1A3KN83 1393 aa15.58■□□□□ 0.08
HMGN1-220ENST00000492280 GSPT1P15170 499 aaKnown RBP15.58■□□□□ 0.08
HMGN1-220ENST00000492280 TBC1D9Q6ZT07 1266 aa15.58■□□□□ 0.08
HMGN1-220ENST00000492280 CD2BP2O95400 341 aaKnown RBP15.57■□□□□ 0.08
HMGN1-220ENST00000492280 HOXC9P31274 260 aa15.57■□□□□ 0.08
HMGN1-220ENST00000492280 GCC1Q96CN9 775 aa15.57■□□□□ 0.08
HMGN1-220ENST00000492280 ATP10DQ9P241 1426 aa15.57■□□□□ 0.08
HMGN1-220ENST00000492280 TTC21AQ8NDW8 1320 aa15.56■□□□□ 0.08
HMGN1-220ENST00000492280 TSHZ3Q63HK5 1081 aa15.56■□□□□ 0.08
HMGN1-220ENST00000492280 ARHGEF10O15013 1369 aa15.55■□□□□ 0.08
HMGN1-220ENST00000492280 BMP2KLQ5H9B9 411 aa15.55■□□□□ 0.08
HMGN1-220ENST00000492280 IGSF1Q8N6C5 1336 aa15.55■□□□□ 0.08
HMGN1-220ENST00000492280 CEP85Q6P2H3 762 aa15.55■□□□□ 0.08
HMGN1-220ENST00000492280 INTS3Q68E01 1043 aaKnown RBP15.54■□□□□ 0.08
HMGN1-220ENST00000492280 RTL1A6NKG5 1358 aa15.54■□□□□ 0.08
HMGN1-220ENST00000492280 XRN1Q8IZH2 1706 aaKnown RBP15.53■□□□□ 0.08
HMGN1-220ENST00000492280 LMOD2Q6P5Q4 547 aa15.53■□□□□ 0.08
HMGN1-220ENST00000492280 PLEKHM2Q8IWE5 1019 aa15.53■□□□□ 0.08
HMGN1-220ENST00000492280 MARF1Q9Y4F3 1742 aaKnown RBP15.52■□□□□ 0.08
HMGN1-220ENST00000492280 ESCO1Q5FWF5 840 aa15.52■□□□□ 0.08
HMGN1-220ENST00000492280 HSCBQ8IWL3 235 aa15.52■□□□□ 0.08
HMGN1-220ENST00000492280 IL17REQ8NFR9 667 aa15.52■□□□□ 0.08
HMGN1-220ENST00000492280 LRRC59Q96AG4 307 aaKnown RBP15.52■□□□□ 0.08
HMGN1-220ENST00000492280 GZF1Q9H116 711 aaPredicted RBP15.52■□□□□ 0.08
HMGN1-220ENST00000492280 KDRP35968 1356 aa15.52■□□□□ 0.07
HMGN1-220ENST00000492280 EXOC6BQ9Y2D4 811 aa15.52■□□□□ 0.07
HMGN1-220ENST00000492280 FKBP5Q13451 457 aaPredicted RBP15.51■□□□□ 0.07
HMGN1-220ENST00000492280 ANKRD44Q8N8A2 993 aa15.51■□□□□ 0.07
HMGN1-220ENST00000492280 KIF2CQ99661 725 aa15.51■□□□□ 0.07
HMGN1-220ENST00000492280 DCTPP1Q9H773 170 aa15.51■□□□□ 0.07
HMGN1-220ENST00000492280 PHF8Q9UPP1 1060 aa15.51■□□□□ 0.07
HMGN1-220ENST00000492280 KIAA0232Q92628 1395 aa15.5■□□□□ 0.07
HMGN1-220ENST00000492280 ANXA1P04083 346 aa15.5■□□□□ 0.07
HMGN1-220ENST00000492280 GAS2L2Q8NHY3 880 aa15.5■□□□□ 0.07
HMGN1-220ENST00000492280 CHMP4BQ9H444 224 aaKnown RBP15.5■□□□□ 0.07
HMGN1-220ENST00000492280 GNAT3A8MTJ3 354 aa15.49■□□□□ 0.07
HMGN1-220ENST00000492280 NWD1Q149M9 1564 aa15.49■□□□□ 0.07
HMGN1-220ENST00000492280 ORAI2Q96SN7 254 aa15.49■□□□□ 0.07
HMGN1-220ENST00000492280 AK9Q5TCS8 1911 aa15.48■□□□□ 0.07
HMGN1-220ENST00000492280 EIF2S2P20042 333 aaKnown RBP15.48■□□□□ 0.07
HMGN1-220ENST00000492280 RBM25P49756 843 aaKnown RBP15.48■□□□□ 0.07
HMGN1-220ENST00000492280 FLIIQ13045 1269 aa15.48■□□□□ 0.07
HMGN1-220ENST00000492280 NBPF6Q5VWK0 638 aa15.48■□□□□ 0.07
HMGN1-220ENST00000492280 ANKLE2Q86XL3 938 aa15.48■□□□□ 0.07
HMGN1-220ENST00000492280 NBPF4Q96M43 638 aa15.48■□□□□ 0.07
HMGN1-220ENST00000492280 PHAXQ9H814 394 aaKnown RBP15.48■□□□□ 0.07
HMGN1-220ENST00000492280 PTPRCP08575 1304 aa15.47■□□□□ 0.07
HMGN1-220ENST00000492280 LTN1O94822 1766 aa15.47■□□□□ 0.07
HMGN1-220ENST00000492280 KCNQ3O43525 872 aa15.47■□□□□ 0.07
HMGN1-220ENST00000492280 TTC22Q5TAA0 569 aa15.47■□□□□ 0.07
HMGN1-220ENST00000492280 STK31Q9BXU1 1019 aa15.47■□□□□ 0.07
HMGN1-220ENST00000492280 LGR6Q9HBX8 967 aa15.47■□□□□ 0.07
HMGN1-220ENST00000492280 RGPD2P0DJD1 1756 aa15.47■□□□□ 0.07
HMGN1-220ENST00000492280 CDC45O75419 566 aa15.47■□□□□ 0.07
HMGN1-220ENST00000492280 HSP90AB1P08238 724 aaKnown RBP15.47■□□□□ 0.07
HMGN1-220ENST00000492280 PNMA6EA0A0J9YXQ4 647 aa15.46■□□□□ 0.07
HMGN1-220ENST00000492280 PSME1Q06323 249 aa15.46■□□□□ 0.07
HMGN1-220ENST00000492280 SDSP20132 328 aa15.45■□□□□ 0.06
HMGN1-220ENST00000492280 MAP3K5Q99683 1374 aa15.45■□□□□ 0.06
HMGN1-220ENST00000492280 HSP90AA1P07900 732 aaKnown RBP15.44■□□□□ 0.06
HMGN1-220ENST00000492280 MPRIPQ6WCQ1 1025 aa15.44■□□□□ 0.06
HMGN1-220ENST00000492280 RPAP2Q8IXW5 612 aaPredicted RBP15.44■□□□□ 0.06
HMGN1-220ENST00000492280 ANKARQ7Z5J8 1434 aa15.44■□□□□ 0.06
HMGN1-220ENST00000492280 FAM208AQ9UK61 1670 aaKnown RBP15.43■□□□□ 0.06
HMGN1-220ENST00000492280 MCM4P33991 863 aa15.43■□□□□ 0.06
HMGN1-220ENST00000492280 HAP1P54257 671 aaPredicted RBP15.43■□□□□ 0.06
HMGN1-220ENST00000492280 HDGFL1Q5TGJ6 251 aa15.43■□□□□ 0.06
HMGN1-220ENST00000492280 CHMP5Q9NZZ3 219 aa15.43■□□□□ 0.06
HMGN1-220ENST00000492280 LRRFIP2Q9Y608 721 aaKnown RBP15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms