RNA–Protein interactions for RNA: ENST00000491592.1

RTN4-215, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-215ENST00000491592 GRM5P41594 1212 aa7.75□□□□□ -1.17
RTN4-215ENST00000491592 NR5A1Q13285 461 aa7.75□□□□□ -1.17
RTN4-215ENST00000491592 PCDHB11Q9Y5F2 797 aa7.75□□□□□ -1.17
RTN4-215ENST00000491592 H3BM21 787 aa7.74□□□□□ -1.17
RTN4-215ENST00000491592 ERVH48-1M5A8F1 160 aa7.74□□□□□ -1.17
RTN4-215ENST00000491592 NR3C2P08235 984 aa7.74□□□□□ -1.17
RTN4-215ENST00000491592 RFX1P22670 979 aa7.74□□□□□ -1.17
RTN4-215ENST00000491592 LMOD1P29536 600 aaPredicted RBP7.74□□□□□ -1.17
RTN4-215ENST00000491592 GMPRP36959 345 aa7.74□□□□□ -1.17
RTN4-215ENST00000491592 NNTQ13423 1086 aa7.74□□□□□ -1.17
RTN4-215ENST00000491592 NCOA4Q13772 614 aa7.74□□□□□ -1.17
RTN4-215ENST00000491592 MAP7D1Q3KQU3 841 aa7.74□□□□□ -1.17
RTN4-215ENST00000491592 CCDC125Q86Z20 511 aa7.74□□□□□ -1.17
RTN4-215ENST00000491592 PLEKHM2Q8IWE5 1019 aa7.74□□□□□ -1.17
RTN4-215ENST00000491592 CCDC116Q8IYX3 515 aa7.74□□□□□ -1.17
RTN4-215ENST00000491592 DEPDC4Q8N2C3 294 aa7.74□□□□□ -1.17
RTN4-215ENST00000491592 ZSCAN1Q8NBB4 408 aa7.74□□□□□ -1.17
RTN4-215ENST00000491592 ZFP42Q96MM3 310 aa7.74□□□□□ -1.17
RTN4-215ENST00000491592 DHX9Q08211 1270 aaKnown RBP7.73□□□□□ -1.17
RTN4-215ENST00000491592 SCARF1Q14162 830 aa7.73□□□□□ -1.17
RTN4-215ENST00000491592 EML3Q32P44 896 aa7.73□□□□□ -1.17
RTN4-215ENST00000491592 OXLD1Q5BKU9 147 aa7.73□□□□□ -1.17
RTN4-215ENST00000491592 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.72□□□□□ -1.17
RTN4-215ENST00000491592 TSGA10IPQ3SY00 556 aa7.72□□□□□ -1.17
RTN4-215ENST00000491592 MRPL14Q6P1L8 145 aaKnown RBP7.72□□□□□ -1.17
RTN4-215ENST00000491592 PBXIP1Q96AQ6 731 aa7.72□□□□□ -1.17
RTN4-215ENST00000491592 PPP1R26Q5T8A7 1209 aaPredicted RBP7.71□□□□□ -1.18
RTN4-215ENST00000491592 ZNF784Q8NCA9 323 aaPredicted RBP7.71□□□□□ -1.18
RTN4-215ENST00000491592 CDCA7Q9BWT1 371 aaPredicted RBP7.71□□□□□ -1.18
RTN4-215ENST00000491592 TMPRSS4Q9NRS4 437 aa7.71□□□□□ -1.18
RTN4-215ENST00000491592 LZTS3O60299 673 aaPredicted RBP7.7□□□□□ -1.18
RTN4-215ENST00000491592 WDR4P57081 412 aaKnown RBP7.7□□□□□ -1.18
RTN4-215ENST00000491592 CYLDQ9NQC7 956 aa7.7□□□□□ -1.18
RTN4-215ENST00000491592 SCTRP47872 440 aa7.69□□□□□ -1.18
RTN4-215ENST00000491592 VEGFBP49765 207 aa7.69□□□□□ -1.18
RTN4-215ENST00000491592 ERVK-9P63128 1117 aa7.69□□□□□ -1.18
RTN4-215ENST00000491592 PGPEP1Q9NXJ5 209 aa7.69□□□□□ -1.18
RTN4-215ENST00000491592 EMILIN1Q9Y6C2 1016 aa7.69□□□□□ -1.18
RTN4-215ENST00000491592 ATP5J2-PTCD1G3V325 749 aa7.68□□□□□ -1.18
RTN4-215ENST00000491592 PPP1R15AO75807 674 aaPredicted RBP7.68□□□□□ -1.18
RTN4-215ENST00000491592 MYCP01106 439 aaPredicted RBP7.68□□□□□ -1.18
RTN4-215ENST00000491592 TIMP2P16035 220 aa7.68□□□□□ -1.18
RTN4-215ENST00000491592 KANK4Q5T7N3 995 aaPredicted RBP7.68□□□□□ -1.18
RTN4-215ENST00000491592 CC2D2BQ6DHV5 1058 aa7.68□□□□□ -1.18
RTN4-215ENST00000491592 TRIM52Q96A61 297 aa7.68□□□□□ -1.18
RTN4-215ENST00000491592 MKRN1Q9UHC7 482 aaKnown RBP7.68□□□□□ -1.18
RTN4-215ENST00000491592 NOD1Q9Y239 953 aa7.68□□□□□ -1.18
RTN4-215ENST00000491592 GTF2IP78347 998 aa7.67□□□□□ -1.18
RTN4-215ENST00000491592 SRPK2P78362 688 aaKnown RBP7.67□□□□□ -1.18
RTN4-215ENST00000491592 ITPKCQ96DU7 683 aa7.67□□□□□ -1.18
RTN4-215ENST00000491592 SIRT1Q96EB6 747 aa7.67□□□□□ -1.18
RTN4-215ENST00000491592 PURBQ96QR8 312 aaKnown RBP7.67□□□□□ -1.18
RTN4-215ENST00000491592 LILRA1O75019 489 aa7.66□□□□□ -1.18
RTN4-215ENST00000491592 ZIC2O95409 532 aaPredicted RBP7.66□□□□□ -1.18
RTN4-215ENST00000491592 LORP23490 312 aaPredicted RBP7.66□□□□□ -1.18
RTN4-215ENST00000491592 USP4Q13107 963 aa7.66□□□□□ -1.18
RTN4-215ENST00000491592 CDCA8Q53HL2 280 aa7.66□□□□□ -1.18
RTN4-215ENST00000491592 TRIM50Q86XT4 487 aa7.66□□□□□ -1.18
RTN4-215ENST00000491592 KLF16Q9BXK1 252 aaPredicted RBP7.66□□□□□ -1.18
RTN4-215ENST00000491592 VRTNQ9H8Y1 702 aa7.66□□□□□ -1.18
RTN4-215ENST00000491592 ERBB4Q15303 1308 aa7.66□□□□□ -1.18
RTN4-215ENST00000491592 FAM196BA6NMK8 535 aa7.65□□□□□ -1.18
RTN4-215ENST00000491592 USP17L15C9J2P7 530 aa7.65□□□□□ -1.18
RTN4-215ENST00000491592 USP17L10C9JJH3 530 aa7.65□□□□□ -1.18
RTN4-215ENST00000491592 USP17L13C9JLJ4 530 aa7.65□□□□□ -1.18
RTN4-215ENST00000491592 USP17L12C9JPN9 530 aa7.65□□□□□ -1.18
RTN4-215ENST00000491592 USP17L11C9JVI0 530 aa7.65□□□□□ -1.18
RTN4-215ENST00000491592 USP17L21D6R901 530 aa7.65□□□□□ -1.18
RTN4-215ENST00000491592 USP17L18D6R9N7 530 aa7.65□□□□□ -1.18
RTN4-215ENST00000491592 USP17L22D6RA61 530 aa7.65□□□□□ -1.18
RTN4-215ENST00000491592 USP17L17D6RBQ6 530 aa7.65□□□□□ -1.18
RTN4-215ENST00000491592 USP17L19D6RCP7 530 aa7.65□□□□□ -1.18
RTN4-215ENST00000491592 USP17L20D6RJB6 530 aa7.65□□□□□ -1.18
RTN4-215ENST00000491592 ATP1A2P50993 1020 aa7.65□□□□□ -1.18
RTN4-215ENST00000491592 USP17L24Q0WX57 530 aa7.65□□□□□ -1.18
RTN4-215ENST00000491592 OSBPL3Q9H4L5 887 aa7.65□□□□□ -1.18
RTN4-215ENST00000491592 RASA1P20936 1047 aa7.64□□□□□ -1.19
RTN4-215ENST00000491592 CLDN10P78369 228 aa7.64□□□□□ -1.19
RTN4-215ENST00000491592 CRTC2Q53ET0 693 aaPredicted RBP7.64□□□□□ -1.19
RTN4-215ENST00000491592 CYP2U1Q7Z449 544 aa7.64□□□□□ -1.19
RTN4-215ENST00000491592 OGFOD1Q8N543 542 aa7.64□□□□□ -1.19
RTN4-215ENST00000491592 ESF1Q9H501 851 aaKnown RBP7.64□□□□□ -1.19
RTN4-215ENST00000491592 ZFAND3Q9H8U3 227 aa7.64□□□□□ -1.19
RTN4-215ENST00000491592 MAN1A2O60476 641 aa7.63□□□□□ -1.19
RTN4-215ENST00000491592 UPP2O95045 317 aa7.63□□□□□ -1.19
RTN4-215ENST00000491592 ATG7O95352 703 aa7.63□□□□□ -1.19
RTN4-215ENST00000491592 ADH1AP07327 375 aa7.63□□□□□ -1.19
RTN4-215ENST00000491592 VSIG8P0DPA2 414 aa7.63□□□□□ -1.19
RTN4-215ENST00000491592 PSME1Q06323 249 aa7.63□□□□□ -1.19
RTN4-215ENST00000491592 LARP1Q6PKG0 1096 aaKnown RBP7.63□□□□□ -1.19
RTN4-215ENST00000491592 ZNF594Q96JF6 807 aaPredicted RBP7.63□□□□□ -1.19
RTN4-215ENST00000491592 DNAAF2Q9NVR5 837 aaKnown RBP7.63□□□□□ -1.19
RTN4-215ENST00000491592 KIAA1024Q9UPX6 916 aa7.63□□□□□ -1.19
RTN4-215ENST00000491592 ADD1P35611 737 aaKnown RBP7.62□□□□□ -1.19
RTN4-215ENST00000491592 CBLBQ13191 982 aa7.62□□□□□ -1.19
RTN4-215ENST00000491592 PTK7Q13308 1070 aa7.62□□□□□ -1.19
RTN4-215ENST00000491592 SIX5Q8N196 739 aa7.62□□□□□ -1.19
RTN4-215ENST00000491592 ZMIZ1Q9ULJ6 1067 aa7.62□□□□□ -1.19
RTN4-215ENST00000491592 PCDHGA11Q9Y5H2 935 aa7.62□□□□□ -1.19
RTN4-215ENST00000491592 Q6ZVU0 165 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms