RNA–Protein interactions for RNA: ENST00000490753.1

NOP56-215, Transcript of NOP56 ribonucleoprotein, humanhuman

TSL 2

Gene NOP56, Length 640 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOP56-215ENST00000490753 POLD1P28340 1107 aa13.79□□□□□ -0.2
NOP56-215ENST00000490753 KCNQ4P56696 695 aa13.79□□□□□ -0.2
NOP56-215ENST00000490753 HDGFL2Q7Z4V5 671 aaPredicted RBP13.79□□□□□ -0.2
NOP56-215ENST00000490753 NLGN2Q8NFZ4 835 aa13.79□□□□□ -0.2
NOP56-215ENST00000490753 TMC1Q8TDI8 760 aa13.79□□□□□ -0.2
NOP56-215ENST00000490753 NEUROD1Q13562 356 aa13.78□□□□□ -0.2
NOP56-215ENST00000490753 PELP1Q8IZL8 1130 aaKnown RBP13.78□□□□□ -0.2
NOP56-215ENST00000490753 DDX54Q8TDD1 881 aaKnown RBP13.78□□□□□ -0.2
NOP56-215ENST00000490753 SLC12A5Q9H2X9 1139 aa13.78□□□□□ -0.2
NOP56-215ENST00000490753 UBR3Q6ZT12 1888 aa13.78□□□□□ -0.2
NOP56-215ENST00000490753 GIGYF1O75420 1035 aaPredicted RBP13.77□□□□□ -0.21
NOP56-215ENST00000490753 IP6K1Q92551 441 aa13.77□□□□□ -0.21
NOP56-215ENST00000490753 LTV1Q96GA3 475 aaPredicted RBP13.77□□□□□ -0.21
NOP56-215ENST00000490753 TFCP2L1Q9NZI6 479 aa13.77□□□□□ -0.21
NOP56-215ENST00000490753 SYTL4Q96C24 671 aaPredicted RBP13.76□□□□□ -0.21
NOP56-215ENST00000490753 PRIM1P49642 420 aaKnown RBP13.75□□□□□ -0.21
NOP56-215ENST00000490753 CARD11Q9BXL7 1154 aa13.75□□□□□ -0.21
NOP56-215ENST00000490753 TERF2IPQ9NYB0 399 aa13.75□□□□□ -0.21
NOP56-215ENST00000490753 C4BP0C0L5 1744 aa13.75□□□□□ -0.21
NOP56-215ENST00000490753 PKD1L3Q7Z443 1732 aa13.75□□□□□ -0.21
NOP56-215ENST00000490753 MAP3K19Q56UN5 1328 aa13.74□□□□□ -0.21
NOP56-215ENST00000490753 RTL1A6NKG5 1358 aa13.73□□□□□ -0.21
NOP56-215ENST00000490753 YBX3P16989 372 aaKnown RBP eCLIP13.73□□□□□ -0.216e-6■□□□□ 10.9
NOP56-215ENST00000490753 HOXC9P31274 260 aa13.73□□□□□ -0.21
NOP56-215ENST00000490753 CCNL1Q9UK58 526 aaPredicted RBP13.73□□□□□ -0.21
NOP56-215ENST00000490753 MAP2P11137 1827 aaKnown RBP13.72□□□□□ -0.21
NOP56-215ENST00000490753 ATP10DQ9P241 1426 aa13.72□□□□□ -0.21
NOP56-215ENST00000490753 USP47Q96K76 1375 aa13.71□□□□□ -0.21
NOP56-215ENST00000490753 ZCRB1Q8TBF4 217 aaKnown RBP13.71□□□□□ -0.21
NOP56-215ENST00000490753 ANKRD26Q9UPS8 1709 aa13.7□□□□□ -0.22
NOP56-215ENST00000490753 FBLN1P23142 703 aa13.7□□□□□ -0.22
NOP56-215ENST00000490753 MSL1Q68DK7 614 aa13.7□□□□□ -0.22
NOP56-215ENST00000490753 COL23A1Q86Y22 540 aaPredicted RBP13.7□□□□□ -0.22
NOP56-215ENST00000490753 COG3Q96JB2 828 aa13.7□□□□□ -0.22
NOP56-215ENST00000490753 MSH5O43196 834 aa13.69□□□□□ -0.22
NOP56-215ENST00000490753 AMPHP49418 695 aa13.69□□□□□ -0.22
NOP56-215ENST00000490753 PUS7Q96PZ0 661 aaKnown RBP13.69□□□□□ -0.22
NOP56-215ENST00000490753 ADCY9O60503 1353 aa13.69□□□□□ -0.22
NOP56-215ENST00000490753 SMG6Q86US8 1419 aaKnown RBP13.68□□□□□ -0.22
NOP56-215ENST00000490753 GRIN3BO60391 1043 aa13.68□□□□□ -0.22
NOP56-215ENST00000490753 USHBP1Q8N6Y0 703 aa13.68□□□□□ -0.22
NOP56-215ENST00000490753 KIF13BQ9NQT8 1826 aa13.68□□□□□ -0.22
NOP56-215ENST00000490753 KIAA1551Q9HCM1 1747 aa13.67□□□□□ -0.22
NOP56-215ENST00000490753 TESK2Q96S53 571 aa13.67□□□□□ -0.22
NOP56-215ENST00000490753 PALLDQ8WX93 1383 aa13.67□□□□□ -0.22
NOP56-215ENST00000490753 CICQ96RK0 1608 aaPredicted RBP13.66□□□□□ -0.22
NOP56-215ENST00000490753 RRS1Q15050 365 aaKnown RBP13.66□□□□□ -0.22
NOP56-215ENST00000490753 IFFO2Q5TF58 517 aa13.66□□□□□ -0.22
NOP56-215ENST00000490753 NBPF6Q5VWK0 638 aa13.66□□□□□ -0.22
NOP56-215ENST00000490753 NBPF4Q96M43 638 aa13.66□□□□□ -0.22
NOP56-215ENST00000490753 N4BP2Q86UW6 1770 aaPredicted RBP13.66□□□□□ -0.22
NOP56-215ENST00000490753 CGNL1Q0VF96 1302 aa13.65□□□□□ -0.22
NOP56-215ENST00000490753 TONSLQ96HA7 1378 aa13.65□□□□□ -0.22
NOP56-215ENST00000490753 BRCA1P38398 1863 aaKnown RBP13.65□□□□□ -0.22
NOP56-215ENST00000490753 PCDH11XQ9BZA7 1347 aa13.64□□□□□ -0.23
NOP56-215ENST00000490753 PCDH11YQ9BZA8 1340 aa13.64□□□□□ -0.23
NOP56-215ENST00000490753 RAPGEF4Q8WZA2 1011 aa13.64□□□□□ -0.23
NOP56-215ENST00000490753 ZEB1P37275 1124 aaPredicted RBP13.63□□□□□ -0.23
NOP56-215ENST00000490753 CD2APQ9Y5K6 639 aa13.63□□□□□ -0.23
NOP56-215ENST00000490753 INSRP06213 1382 aa13.62□□□□□ -0.23
NOP56-215ENST00000490753 FLT4P35916 1363 aa13.62□□□□□ -0.23
NOP56-215ENST00000490753 ST20-MTHFSA0A0A6YYL1 179 aa13.62□□□□□ -0.23
NOP56-215ENST00000490753 AMIGO3Q86WK7 504 aa13.62□□□□□ -0.23
NOP56-215ENST00000490753 GGNBP2Q9H3C7 697 aa13.62□□□□□ -0.23
NOP56-215ENST00000490753 GPBP1L1Q9HC44 474 aaPredicted RBP13.62□□□□□ -0.23
NOP56-215ENST00000490753 NCAPD2Q15021 1401 aa13.62□□□□□ -0.23
NOP56-215ENST00000490753 COL5A3P25940 1745 aaPredicted RBP13.61□□□□□ -0.23
NOP56-215ENST00000490753 TATP17735 454 aaPredicted RBP13.61□□□□□ -0.23
NOP56-215ENST00000490753 FLAD1Q8NFF5 587 aa13.61□□□□□ -0.23
NOP56-215ENST00000490753 NSD3Q9BZ95 1437 aa13.61□□□□□ -0.23
NOP56-215ENST00000490753 C4AP0C0L4 1744 aa13.61□□□□□ -0.23
NOP56-215ENST00000490753 FYB1O15117 783 aa13.6□□□□□ -0.23
NOP56-215ENST00000490753 CYP27B1O15528 508 aa13.6□□□□□ -0.23
NOP56-215ENST00000490753 HSP90AB2PQ58FF8 381 aa13.6□□□□□ -0.23
NOP56-215ENST00000490753 MPRIPQ6WCQ1 1025 aa13.6□□□□□ -0.23
NOP56-215ENST00000490753 ZNF526Q8TF50 670 aaPredicted RBP13.6□□□□□ -0.23
NOP56-215ENST00000490753 AK7Q96M32 723 aa13.6□□□□□ -0.23
NOP56-215ENST00000490753 IGSF1Q8N6C5 1336 aa13.6□□□□□ -0.23
NOP56-215ENST00000490753 ZNF831Q5JPB2 1677 aa13.59□□□□□ -0.23
NOP56-215ENST00000490753 KIF24Q5T7B8 1368 aa13.59□□□□□ -0.23
NOP56-215ENST00000490753 PHF14O94880 888 aa13.59□□□□□ -0.23
NOP56-215ENST00000490753 WWC3Q9ULE0 1092 aa13.59□□□□□ -0.23
NOP56-215ENST00000490753 ARFGEF1Q9Y6D6 1849 aa13.59□□□□□ -0.23
NOP56-215ENST00000490753 HSPA6P17066 643 aa13.58□□□□□ -0.24
NOP56-215ENST00000490753 SMIM5Q71RC9 77 aa13.58□□□□□ -0.24
NOP56-215ENST00000490753 HMGB2P26583 209 aaKnown RBP13.57□□□□□ -0.24
NOP56-215ENST00000490753 SMARCC1Q92922 1105 aaPredicted RBP13.57□□□□□ -0.24
NOP56-215ENST00000490753 MYH14Q7Z406 1995 aaKnown RBP13.57□□□□□ -0.24
NOP56-215ENST00000490753 WDR90Q96KV7 1748 aa13.56□□□□□ -0.24
NOP56-215ENST00000490753 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.56□□□□□ -0.24
NOP56-215ENST00000490753 PXDNLA1KZ92 1463 aa13.55□□□□□ -0.24
NOP56-215ENST00000490753 SSFA2P28290 1259 aa13.55□□□□□ -0.24
NOP56-215ENST00000490753 LINC00116Q8NCU8 138 aa13.55□□□□□ -0.24
NOP56-215ENST00000490753 PIGBQ92521 554 aa13.55□□□□□ -0.24
NOP56-215ENST00000490753 SLC24A1O60721 1099 aa13.54□□□□□ -0.24
NOP56-215ENST00000490753 EMILIN1Q9Y6C2 1016 aa13.54□□□□□ -0.24
NOP56-215ENST00000490753 VIRMAQ69YN4 1812 aaKnown RBP13.54□□□□□ -0.24
NOP56-215ENST00000490753 LOC102724428A0A0B4J2F2 783 aa13.53□□□□□ -0.24
NOP56-215ENST00000490753 KIF3CO14782 793 aa13.53□□□□□ -0.24
NOP56-215ENST00000490753 SIK1P57059 783 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 2304.5 ms