RNA–Protein interactions for RNA: ENST00000489741.1

PRPF40A-210, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-210ENST00000489741 CDC42BPAQ5VT25 1732 aa10.21□□□□□ -0.77
PRPF40A-210ENST00000489741 LILRB3O75022 631 aa10.21□□□□□ -0.77
PRPF40A-210ENST00000489741 BRPF1P55201 1214 aaPredicted RBP10.21□□□□□ -0.77
PRPF40A-210ENST00000489741 SKIV2LQ15477 1246 aaKnown RBP10.21□□□□□ -0.77
PRPF40A-210ENST00000489741 NPATQ14207 1427 aa10.21□□□□□ -0.78
PRPF40A-210ENST00000489741 SYCP2Q9BX26 1530 aa10.21□□□□□ -0.78
PRPF40A-210ENST00000489741 PREX1Q8TCU6 1659 aa10.21□□□□□ -0.78
PRPF40A-210ENST00000489741 PRR20EP86478 221 aa10.2□□□□□ -0.78
PRPF40A-210ENST00000489741 PRR20CP86479 221 aa10.2□□□□□ -0.78
PRPF40A-210ENST00000489741 PRR20DP86480 221 aa10.2□□□□□ -0.78
PRPF40A-210ENST00000489741 PRR20BP86481 221 aa10.2□□□□□ -0.78
PRPF40A-210ENST00000489741 PRR20AP86496 221 aa10.2□□□□□ -0.78
PRPF40A-210ENST00000489741 STRCQ7RTU9 1775 aa10.2□□□□□ -0.78
PRPF40A-210ENST00000489741 A2MP01023 1474 aa10.19□□□□□ -0.78
PRPF40A-210ENST00000489741 NCOA1Q15788 1441 aa10.19□□□□□ -0.78
PRPF40A-210ENST00000489741 CEP162Q5TB80 1403 aa10.19□□□□□ -0.78
PRPF40A-210ENST00000489741 GDF9O60383 454 aa10.19□□□□□ -0.78
PRPF40A-210ENST00000489741 HELBQ8NG08 1087 aaPredicted RBP10.19□□□□□ -0.78
PRPF40A-210ENST00000489741 PKD2L1Q9P0L9 805 aa10.19□□□□□ -0.78
PRPF40A-210ENST00000489741 RTEL1-TNFRSF6BF6WH68 1400 aa10.18□□□□□ -0.78
PRPF40A-210ENST00000489741 DHX29Q7Z478 1369 aaKnown RBP10.18□□□□□ -0.78
PRPF40A-210ENST00000489741 CTHP32929 405 aa10.18□□□□□ -0.78
PRPF40A-210ENST00000489741 RTL5Q5HYW3 569 aaPredicted RBP10.18□□□□□ -0.78
PRPF40A-210ENST00000489741 PTCRAQ6ISU1 281 aaPredicted RBP10.18□□□□□ -0.78
PRPF40A-210ENST00000489741 GGT6Q6P531 493 aa10.18□□□□□ -0.78
PRPF40A-210ENST00000489741 LYPD8Q6UX82 237 aa10.18□□□□□ -0.78
PRPF40A-210ENST00000489741 C3P01024 1663 aa10.18□□□□□ -0.78
PRPF40A-210ENST00000489741 ATP7AQ04656 1500 aa10.17□□□□□ -0.78
PRPF40A-210ENST00000489741 PRKCSHP14314 528 aaPredicted RBP10.17□□□□□ -0.78
PRPF40A-210ENST00000489741 KCNH2Q12809 1159 aa10.17□□□□□ -0.78
PRPF40A-210ENST00000489741 IL27Q8NEV9 243 aa10.17□□□□□ -0.78
PRPF40A-210ENST00000489741 EVA1BQ9NVM1 165 aa10.17□□□□□ -0.78
PRPF40A-210ENST00000489741 PLXNC1O60486 1568 aa10.17□□□□□ -0.78
PRPF40A-210ENST00000489741 PTPRKQ15262 1439 aa10.16□□□□□ -0.78
PRPF40A-210ENST00000489741 PROCA1Q8NCQ7 364 aaPredicted RBP10.16□□□□□ -0.78
PRPF40A-210ENST00000489741 UNC93B1Q9H1C4 597 aa10.16□□□□□ -0.78
PRPF40A-210ENST00000489741 INO80Q9ULG1 1556 aaPredicted RBP10.16□□□□□ -0.78
PRPF40A-210ENST00000489741 WNT7AO00755 349 aa10.15□□□□□ -0.78
PRPF40A-210ENST00000489741 WNT7BP56706 349 aa10.15□□□□□ -0.78
PRPF40A-210ENST00000489741 LTBP4Q8N2S1 1624 aa10.15□□□□□ -0.79
PRPF40A-210ENST00000489741 TIAM1Q13009 1591 aa10.14□□□□□ -0.79
PRPF40A-210ENST00000489741 FAM187AA6NFU0 413 aa10.14□□□□□ -0.79
PRPF40A-210ENST00000489741 PKDCCQ504Y2 493 aa10.14□□□□□ -0.79
PRPF40A-210ENST00000489741 CYP4X1Q8N118 509 aa10.14□□□□□ -0.79
PRPF40A-210ENST00000489741 EHBP1L1Q8N3D4 1523 aa10.13□□□□□ -0.79
PRPF40A-210ENST00000489741 MROH2AA6NES4 1674 aa10.13□□□□□ -0.79
PRPF40A-210ENST00000489741 PER1O15534 1290 aaPredicted RBP10.13□□□□□ -0.79
PRPF40A-210ENST00000489741 MAP10Q9P2G4 905 aa10.13□□□□□ -0.79
PRPF40A-210ENST00000489741 LOC105371045A0A1W2PR82 267 aa10.12□□□□□ -0.79
PRPF40A-210ENST00000489741 SKOR1P84550 965 aa10.12□□□□□ -0.79
PRPF40A-210ENST00000489741 LINC01559Q495D7 138 aa10.12□□□□□ -0.79
PRPF40A-210ENST00000489741 RC3H1Q5TC82 1133 aaKnown RBP10.12□□□□□ -0.79
PRPF40A-210ENST00000489741 MRGPRX2Q96LB1 330 aa10.12□□□□□ -0.79
PRPF40A-210ENST00000489741 PCMTD1Q96MG8 357 aaPredicted RBP10.12□□□□□ -0.79
PRPF40A-210ENST00000489741 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.12□□□□□ -0.79
PRPF40A-210ENST00000489741 CAMSAP1Q5T5Y3 1602 aa10.11□□□□□ -0.79
PRPF40A-210ENST00000489741 PLA2R1Q13018 1463 aa10.11□□□□□ -0.79
PRPF40A-210ENST00000489741 TCOF1Q13428 1488 aaKnown RBP10.11□□□□□ -0.79
PRPF40A-210ENST00000489741 NCOA2Q15596 1464 aa10.11□□□□□ -0.79
PRPF40A-210ENST00000489741 IQSEC2Q5JU85 1478 aa10.11□□□□□ -0.79
PRPF40A-210ENST00000489741 TTC24A2A3L6 582 aaPredicted RBP10.11□□□□□ -0.79
PRPF40A-210ENST00000489741 KIF3BO15066 747 aa10.11□□□□□ -0.79
PRPF40A-210ENST00000489741 FBXO31Q5XUX0 539 aaPredicted RBP10.11□□□□□ -0.79
PRPF40A-210ENST00000489741 SUPT6HQ7KZ85 1726 aaKnown RBP10.1□□□□□ -0.79
PRPF40A-210ENST00000489741 ZNF335Q9H4Z2 1342 aaPredicted RBP10.1□□□□□ -0.79
PRPF40A-210ENST00000489741 DGAT1O75907 488 aa10.1□□□□□ -0.79
PRPF40A-210ENST00000489741 F12P00748 615 aaPredicted RBP10.1□□□□□ -0.79
PRPF40A-210ENST00000489741 TRAF7Q6Q0C0 670 aa10.1□□□□□ -0.79
PRPF40A-210ENST00000489741 BAP1Q92560 729 aa10.1□□□□□ -0.79
PRPF40A-210ENST00000489741 GOPCQ9HD26 462 aa10.1□□□□□ -0.79
PRPF40A-210ENST00000489741 CCDC141Q6ZP82 1450 aa10.1□□□□□ -0.79
PRPF40A-210ENST00000489741 TSPY4P0CV99 314 aa10.09□□□□□ -0.79
PRPF40A-210ENST00000489741 TSPY10P0CW01 314 aa10.09□□□□□ -0.79
PRPF40A-210ENST00000489741 KANK4Q5T7N3 995 aaPredicted RBP10.09□□□□□ -0.79
PRPF40A-210ENST00000489741 EHBP1Q8NDI1 1231 aa10.09□□□□□ -0.79
PRPF40A-210ENST00000489741 TOR4AQ9NXH8 423 aa10.09□□□□□ -0.79
PRPF40A-210ENST00000489741 AP1G2O75843 785 aa10.08□□□□□ -0.8
PRPF40A-210ENST00000489741 SH3BP2P78314 561 aa10.08□□□□□ -0.8
PRPF40A-210ENST00000489741 CTDSPL2Q05D32 466 aa10.08□□□□□ -0.8
PRPF40A-210ENST00000489741 PPP2R2DQ66LE6 453 aa10.08□□□□□ -0.8
PRPF40A-210ENST00000489741 ZNF511Q8NB15 262 aa10.08□□□□□ -0.8
PRPF40A-210ENST00000489741 SNIP1Q8TAD8 396 aaKnown RBP10.08□□□□□ -0.8
PRPF40A-210ENST00000489741 A2ML1A8K2U0 1454 aa10.08□□□□□ -0.8
PRPF40A-210ENST00000489741 CAMSAP2Q08AD1 1489 aa10.08□□□□□ -0.8
PRPF40A-210ENST00000489741 WASHC2CQ9Y4E1 1318 aa10.07□□□□□ -0.8
PRPF40A-210ENST00000489741 VPS8Q8N3P4 1428 aa10.07□□□□□ -0.8
PRPF40A-210ENST00000489741 CLTCQ00610 1675 aaKnown RBP10.07□□□□□ -0.8
PRPF40A-210ENST00000489741 ADGBQ8N7X0 1667 aa10.07□□□□□ -0.8
PRPF40A-210ENST00000489741 LRRC9Q6ZRR7 1453 aa10.07□□□□□ -0.8
PRPF40A-210ENST00000489741 TNRQ92752 1358 aa10.07□□□□□ -0.8
PRPF40A-210ENST00000489741 MIA2Q96PC5 1412 aa10.07□□□□□ -0.8
PRPF40A-210ENST00000489741 CEP170BQ9Y4F5 1589 aaPredicted RBP10.06□□□□□ -0.8
PRPF40A-210ENST00000489741 PZPP20742 1482 aa10.06□□□□□ -0.8
PRPF40A-210ENST00000489741 ILDR2Q71H61 639 aa10.06□□□□□ -0.8
PRPF40A-210ENST00000489741 FAM135AQ9P2D6 1515 aa10.06□□□□□ -0.8
PRPF40A-210ENST00000489741 LCE2BO14633 110 aa10.05□□□□□ -0.8
PRPF40A-210ENST00000489741 MAP3K1Q13233 1512 aa10.05□□□□□ -0.8
PRPF40A-210ENST00000489741 ZNF142P52746 1687 aaPredicted RBP10.05□□□□□ -0.8
PRPF40A-210ENST00000489741 ARHGEF5Q12774 1597 aa10.05□□□□□ -0.8
PRPF40A-210ENST00000489741 MYO3AQ8NEV4 1616 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms