RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 TNS1Q9HBL0 1735 aaKnown RBP14.94□□□□□ -0.02
CPSF7-212ENST00000489728 DIAPH1O60610 1272 aaKnown RBP14.93□□□□□ -0.02
CPSF7-212ENST00000489728 USHBP1Q8N6Y0 703 aa14.93□□□□□ -0.02
CPSF7-212ENST00000489728 MARCH10Q8NA82 808 aaPredicted RBP14.93□□□□□ -0.02
CPSF7-212ENST00000489728 ZCRB1Q8TBF4 217 aaKnown RBP14.93□□□□□ -0.02
CPSF7-212ENST00000489728 SBF2Q86WG5 1849 aa14.92□□□□□ -0.02
CPSF7-212ENST00000489728 PCDH11XQ9BZA7 1347 aa14.92□□□□□ -0.02
CPSF7-212ENST00000489728 PCDH11YQ9BZA8 1340 aa14.92□□□□□ -0.02
CPSF7-212ENST00000489728 NHSQ6T4R5 1651 aa14.91□□□□□ -0.02
CPSF7-212ENST00000489728 SF3B2Q13435 895 aaKnown RBP14.91□□□□□ -0.02
CPSF7-212ENST00000489728 RGPD3A6NKT7 1758 aaPredicted RBP14.9□□□□□ -0.02
CPSF7-212ENST00000489728 RGPD4Q7Z3J3 1758 aa14.9□□□□□ -0.02
CPSF7-212ENST00000489728 CNGB1Q14028 1251 aaPredicted RBP14.9□□□□□ -0.02
CPSF7-212ENST00000489728 SPG7Q9UQ90 795 aa14.9□□□□□ -0.02
CPSF7-212ENST00000489728 FAM182BQ5T319 152 aa14.89□□□□□ -0.03
CPSF7-212ENST00000489728 MYBBP1AQ9BQG0 1328 aaKnown RBP14.89□□□□□ -0.03
CPSF7-212ENST00000489728 AMOTQ4VCS5 1084 aa14.88□□□□□ -0.03
CPSF7-212ENST00000489728 NUDCQ9Y266 331 aa14.88□□□□□ -0.03
CPSF7-212ENST00000489728 BAG6P46379 1132 aa14.87□□□□□ -0.03
CPSF7-212ENST00000489728 SULT6B1Q6IMI4 303 aa14.87□□□□□ -0.03
CPSF7-212ENST00000489728 BCL11BQ9C0K0 894 aaPredicted RBP14.87□□□□□ -0.03
CPSF7-212ENST00000489728 TRIM37O94972 964 aa14.86□□□□□ -0.03
CPSF7-212ENST00000489728 DDX54Q8TDD1 881 aaKnown RBP14.86□□□□□ -0.03
CPSF7-212ENST00000489728 PRKRIP1Q9H875 184 aaPredicted RBP14.86□□□□□ -0.03
CPSF7-212ENST00000489728 DOT1LQ8TEK3 1739 aa14.86□□□□□ -0.03
CPSF7-212ENST00000489728 NKX1-1Q15270 411 aaPredicted RBP14.85□□□□□ -0.03
CPSF7-212ENST00000489728 PLEKHO1Q53GL0 409 aaPredicted RBP14.85□□□□□ -0.03
CPSF7-212ENST00000489728 CYP27B1O15528 508 aa14.84□□□□□ -0.03
CPSF7-212ENST00000489728 AEBP1Q8IUX7 1158 aa14.84□□□□□ -0.03
CPSF7-212ENST00000489728 HSP90AB1P08238 724 aaKnown RBP14.83□□□□□ -0.04
CPSF7-212ENST00000489728 IFNL2Q8IZJ0 200 aa14.83□□□□□ -0.04
CPSF7-212ENST00000489728 RREB1Q92766 1687 aa14.82□□□□□ -0.04
CPSF7-212ENST00000489728 U2SURPO15042 1029 aaKnown RBP14.82□□□□□ -0.04
CPSF7-212ENST00000489728 PLSCR1O15162 318 aa14.82□□□□□ -0.04
CPSF7-212ENST00000489728 PHKG2P15735 406 aa14.82□□□□□ -0.04
CPSF7-212ENST00000489728 BTAF1O14981 1849 aa14.82□□□□□ -0.04
CPSF7-212ENST00000489728 TOGARAM1Q9Y4F4 1720 aa14.81□□□□□ -0.04
CPSF7-212ENST00000489728 FCHSD2O94868 740 aa14.81□□□□□ -0.04
CPSF7-212ENST00000489728 APBA3O96018 575 aa14.81□□□□□ -0.04
CPSF7-212ENST00000489728 HMOX1P09601 288 aa14.8□□□□□ -0.04
CPSF7-212ENST00000489728 C1orf141Q5JVX7 400 aa14.8□□□□□ -0.04
CPSF7-212ENST00000489728 U2AF1L5P0DN76 240 aaPredicted RBP14.79□□□□□ -0.04
CPSF7-212ENST00000489728 U2AF1Q01081 240 aaKnown RBP eCLIP14.79□□□□□ -0.04
CPSF7-212ENST00000489728 ZNF530Q6P9A1 599 aaPredicted RBP14.79□□□□□ -0.04
CPSF7-212ENST00000489728 DEFB132Q7Z7B7 95 aa14.79□□□□□ -0.04
CPSF7-212ENST00000489728 DCAF5Q96JK2 942 aa14.79□□□□□ -0.04
CPSF7-212ENST00000489728 CAMKK2Q96RR4 588 aa14.79□□□□□ -0.04
CPSF7-212ENST00000489728 RSPH6AQ9H0K4 717 aa14.79□□□□□ -0.04
CPSF7-212ENST00000489728 ADAMTS7Q9UKP4 1686 aa14.78□□□□□ -0.04
CPSF7-212ENST00000489728 KCNQ2O43526 872 aa14.78□□□□□ -0.04
CPSF7-212ENST00000489728 AKAP4Q5JQC9 854 aa14.78□□□□□ -0.04
CPSF7-212ENST00000489728 ACSBG1Q96GR2 724 aa14.78□□□□□ -0.04
CPSF7-212ENST00000489728 PNNQ9H307 717 aaKnown RBP14.78□□□□□ -0.04
CPSF7-212ENST00000489728 ITGB4P16144 1822 aa14.78□□□□□ -0.04
CPSF7-212ENST00000489728 ERVV-2B6SEH9 535 aa14.77□□□□□ -0.05
CPSF7-212ENST00000489728 ANP32CO43423 234 aa14.77□□□□□ -0.05
CPSF7-212ENST00000489728 PRIM1P49642 420 aaKnown RBP14.77□□□□□ -0.05
CPSF7-212ENST00000489728 EN1Q05925 392 aaPredicted RBP14.77□□□□□ -0.05
CPSF7-212ENST00000489728 GAS2L2Q8NHY3 880 aa14.77□□□□□ -0.05
CPSF7-212ENST00000489728 MRC1P22897 1456 aa14.76□□□□□ -0.05
CPSF7-212ENST00000489728 SCN11AQ9UI33 1791 aa14.76□□□□□ -0.05
CPSF7-212ENST00000489728 NUP188Q5SRE5 1749 aa14.76□□□□□ -0.05
CPSF7-212ENST00000489728 PRKAR2BP31323 418 aa14.76□□□□□ -0.05
CPSF7-212ENST00000489728 KDM6AO15550 1401 aaPredicted RBP14.75□□□□□ -0.05
CPSF7-212ENST00000489728 LY75O60449 1722 aa14.75□□□□□ -0.05
CPSF7-212ENST00000489728 HMGB2P26583 209 aaKnown RBP14.75□□□□□ -0.05
CPSF7-212ENST00000489728 PTF1AQ7RTS3 328 aa14.75□□□□□ -0.05
CPSF7-212ENST00000489728 SYTL4Q96C24 671 aaPredicted RBP14.75□□□□□ -0.05
CPSF7-212ENST00000489728 MAP3K5Q99683 1374 aa14.74□□□□□ -0.05
CPSF7-212ENST00000489728 KAT6BQ8WYB5 2073 aa14.74□□□□□ -0.05
CPSF7-212ENST00000489728 NEFMP07197 916 aa14.74□□□□□ -0.05
CPSF7-212ENST00000489728 EZH2Q15910 746 aaKnown RBP14.74□□□□□ -0.05
CPSF7-212ENST00000489728 MTHFSDQ2M296 383 aaKnown RBP14.74□□□□□ -0.05
CPSF7-212ENST00000489728 SLC27A3Q5K4L6 730 aa14.73□□□□□ -0.05
CPSF7-212ENST00000489728 SMARCC1Q92922 1105 aaPredicted RBP14.73□□□□□ -0.05
CPSF7-212ENST00000489728 TMOD3Q9NYL9 352 aa14.73□□□□□ -0.05
CPSF7-212ENST00000489728 GNAT3A8MTJ3 354 aa14.72□□□□□ -0.05
CPSF7-212ENST00000489728 WDR43Q15061 677 aaKnown RBP eCLIP14.72□□□□□ -0.05
CPSF7-212ENST00000489728 ZNF831Q5JPB2 1677 aa14.71□□□□□ -0.05
CPSF7-212ENST00000489728 VIRMAQ69YN4 1812 aaKnown RBP14.71□□□□□ -0.05
CPSF7-212ENST00000489728 PAPPAQ13219 1627 aa14.71□□□□□ -0.05
CPSF7-212ENST00000489728 TXNRD1Q16881 649 aa14.71□□□□□ -0.05
CPSF7-212ENST00000489728 MPRIPQ6WCQ1 1025 aa14.71□□□□□ -0.05
CPSF7-212ENST00000489728 PIGBQ92521 554 aa14.71□□□□□ -0.05
CPSF7-212ENST00000489728 PLEKHF1Q96S99 279 aa14.71□□□□□ -0.05
CPSF7-212ENST00000489728 HTATSF1O43719 755 aaKnown RBP14.7□□□□□ -0.06
CPSF7-212ENST00000489728 CABP4P57796 275 aa14.7□□□□□ -0.06
CPSF7-212ENST00000489728 PHACTR3Q96KR7 559 aa14.7□□□□□ -0.06
CPSF7-212ENST00000489728 CEMIPQ8WUJ3 1361 aa14.7□□□□□ -0.06
CPSF7-212ENST00000489728 PALLDQ8WX93 1383 aa14.7□□□□□ -0.06
CPSF7-212ENST00000489728 MAPK8IP3Q9UPT6 1336 aa14.69□□□□□ -0.06
CPSF7-212ENST00000489728 RNMTO43148 476 aaKnown RBP14.69□□□□□ -0.06
CPSF7-212ENST00000489728 NBPF14Q5TI25 921 aa14.69□□□□□ -0.06
CPSF7-212ENST00000489728 PROM2Q8N271 834 aa14.69□□□□□ -0.06
CPSF7-212ENST00000489728 CICQ96RK0 1608 aaPredicted RBP14.69□□□□□ -0.06
CPSF7-212ENST00000489728 SLC52A2Q9HAB3 445 aa14.68□□□□□ -0.06
CPSF7-212ENST00000489728 SIPA1L3O60292 1781 aaPredicted RBP14.68□□□□□ -0.06
CPSF7-212ENST00000489728 C5P01031 1676 aa14.66□□□□□ -0.06
CPSF7-212ENST00000489728 NFE2L2Q16236 605 aa14.66□□□□□ -0.06
CPSF7-212ENST00000489728 RTF1Q92541 710 aaKnown RBP14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms