RNA–Protein interactions for RNA: ENST00000489019.6

CALD1-221, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 422 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-221ENST00000489019 SEMA3FQ13275 785 aa5.5□□□□□ -1.53
CALD1-221ENST00000489019 SLFNL1Q499Z3 407 aa5.5□□□□□ -1.53
CALD1-221ENST00000489019 RNF135Q8IUD6 432 aa5.5□□□□□ -1.53
CALD1-221ENST00000489019 TERTO14746 1132 aaKnown RBP5.49□□□□□ -1.53
CALD1-221ENST00000489019 SOX11P35716 441 aa5.49□□□□□ -1.53
CALD1-221ENST00000489019 VEGFBP49765 207 aa5.49□□□□□ -1.53
CALD1-221ENST00000489019 FOXD4L5Q5VV16 416 aaPredicted RBP5.49□□□□□ -1.53
CALD1-221ENST00000489019 TREML4Q6UXN2 200 aa5.49□□□□□ -1.53
CALD1-221ENST00000489019 RNF217Q8TC41 542 aa5.49□□□□□ -1.53
CALD1-221ENST00000489019 NXF1Q9UBU9 619 aaKnown RBP5.49□□□□□ -1.53
CALD1-221ENST00000489019 A0A1W2PRU2 124 aa5.48□□□□□ -1.53
CALD1-221ENST00000489019 PROSER2Q86WR7 435 aaPredicted RBP5.48□□□□□ -1.53
CALD1-221ENST00000489019 POLMQ9NP87 494 aaPredicted RBP5.48□□□□□ -1.53
CALD1-221ENST00000489019 DOLKQ9UPQ8 538 aa5.48□□□□□ -1.53
CALD1-221ENST00000489019 WFS1O76024 890 aa5.47□□□□□ -1.53
CALD1-221ENST00000489019 STAU1O95793 577 aaKnown RBP5.47□□□□□ -1.53
CALD1-221ENST00000489019 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.47□□□□□ -1.537e-10■□□□□ 10.9
CALD1-221ENST00000489019 OXLD1Q5BKU9 147 aa5.47□□□□□ -1.53
CALD1-221ENST00000489019 CYP2U1Q7Z449 544 aa5.47□□□□□ -1.53
CALD1-221ENST00000489019 WWC1Q8IX03 1113 aa5.47□□□□□ -1.53
CALD1-221ENST00000489019 PLPP7Q8NBV4 271 aa5.47□□□□□ -1.53
CALD1-221ENST00000489019 ARHGEF10LQ9HCE6 1279 aa5.47□□□□□ -1.53
CALD1-221ENST00000489019 RAB6BQ9NRW1 208 aa5.47□□□□□ -1.53
CALD1-221ENST00000489019 A6NJR5 290 aa5.46□□□□□ -1.54
CALD1-221ENST00000489019 PTSQ03393 145 aa5.46□□□□□ -1.54
CALD1-221ENST00000489019 HDGFL1Q5TGJ6 251 aa5.46□□□□□ -1.54
CALD1-221ENST00000489019 TRIM52Q96A61 297 aa5.46□□□□□ -1.54
CALD1-221ENST00000489019 UCN2Q96RP3 112 aa5.46□□□□□ -1.54
CALD1-221ENST00000489019 H3BM21 787 aa5.45□□□□□ -1.54
CALD1-221ENST00000489019 MEN1O00255 615 aa5.45□□□□□ -1.54
CALD1-221ENST00000489019 MYCP01106 439 aaPredicted RBP5.45□□□□□ -1.54
CALD1-221ENST00000489019 IL2RAP01589 272 aa5.45□□□□□ -1.54
CALD1-221ENST00000489019 RNF144AP50876 292 aaPredicted RBP5.45□□□□□ -1.54
CALD1-221ENST00000489019 USP4Q13107 963 aa5.45□□□□□ -1.54
CALD1-221ENST00000489019 CLN3Q13286 438 aa5.45□□□□□ -1.54
CALD1-221ENST00000489019 MAP7D1Q3KQU3 841 aa5.45□□□□□ -1.54
CALD1-221ENST00000489019 NPAS3Q8IXF0 933 aa5.45□□□□□ -1.54
CALD1-221ENST00000489019 ERBB4Q15303 1308 aa5.45□□□□□ -1.54
CALD1-221ENST00000489019 SENP3-EIF4A1A0A087X0R7 540 aa5.44□□□□□ -1.54
CALD1-221ENST00000489019 SLC35F4A4IF30 521 aa5.44□□□□□ -1.54
CALD1-221ENST00000489019 PPFIA3O75145 1194 aa5.44□□□□□ -1.54
CALD1-221ENST00000489019 GNRH1P01148 92 aa5.44□□□□□ -1.54
CALD1-221ENST00000489019 SKIP12755 728 aa5.44□□□□□ -1.54
CALD1-221ENST00000489019 PRICKLE2Q7Z3G6 844 aa5.44□□□□□ -1.54
CALD1-221ENST00000489019 ESF1Q9H501 851 aaKnown RBP5.44□□□□□ -1.54
CALD1-221ENST00000489019 HRH3Q9Y5N1 445 aa5.44□□□□□ -1.54
CALD1-221ENST00000489019 GPC1P35052 558 aa5.43□□□□□ -1.54
CALD1-221ENST00000489019 SCNN1DP51172 638 aa5.43□□□□□ -1.54
CALD1-221ENST00000489019 TBC1D9Q6ZT07 1266 aa5.43□□□□□ -1.54
CALD1-221ENST00000489019 LYSMD3Q7Z3D4 306 aa5.43□□□□□ -1.54
CALD1-221ENST00000489019 DEPDC4Q8N2C3 294 aa5.43□□□□□ -1.54
CALD1-221ENST00000489019 CCDC155Q8N6L0 562 aa5.43□□□□□ -1.54
CALD1-221ENST00000489019 NFATC2IPQ8NCF5 419 aa5.43□□□□□ -1.54
CALD1-221ENST00000489019 GLMNQ92990 594 aa5.43□□□□□ -1.54
CALD1-221ENST00000489019 CNKSR1Q969H4 720 aa5.43□□□□□ -1.54
CALD1-221ENST00000489019 ESYT1Q9BSJ8 1104 aa5.43□□□□□ -1.54
CALD1-221ENST00000489019 ETNK1Q9HBU6 452 aa5.43□□□□□ -1.54
CALD1-221ENST00000489019 USP17L5A8MUK1 530 aa5.42□□□□□ -1.54
CALD1-221ENST00000489019 RHOQP17081 205 aa5.42□□□□□ -1.54
CALD1-221ENST00000489019 CENPCQ03188 943 aa5.42□□□□□ -1.54
CALD1-221ENST00000489019 NCOA4Q13772 614 aa5.42□□□□□ -1.54
CALD1-221ENST00000489019 SLC16A10Q8TF71 515 aa5.42□□□□□ -1.54
CALD1-221ENST00000489019 XAGE2Q96GT9 111 aa5.42□□□□□ -1.54
CALD1-221ENST00000489019 NLRP3Q96P20 1036 aa5.42□□□□□ -1.54
CALD1-221ENST00000489019 GRIP2Q9C0E4 1043 aa5.42□□□□□ -1.54
CALD1-221ENST00000489019 PCDHGA11Q9Y5H2 935 aa5.42□□□□□ -1.54
CALD1-221ENST00000489019 VSIG8P0DPA2 414 aa5.41□□□□□ -1.54
CALD1-221ENST00000489019 POU4F2Q12837 409 aa5.41□□□□□ -1.54
CALD1-221ENST00000489019 EML3Q32P44 896 aa5.41□□□□□ -1.54
CALD1-221ENST00000489019 IRF7Q92985 503 aa5.41□□□□□ -1.54
CALD1-221ENST00000489019 SIRT1Q96EB6 747 aa5.41□□□□□ -1.54
CALD1-221ENST00000489019 FHDC1Q9C0D6 1143 aaPredicted RBP5.41□□□□□ -1.54
CALD1-221ENST00000489019 GTF3C3Q9Y5Q9 886 aa5.41□□□□□ -1.54
CALD1-221ENST00000489019 TMEM229AB2RXF0 380 aa5.4□□□□□ -1.54
CALD1-221ENST00000489019 WIPF1O43516 503 aa5.4□□□□□ -1.54
CALD1-221ENST00000489019 ATP9BO43861 1147 aa5.4□□□□□ -1.54
CALD1-221ENST00000489019 GMPRP36959 345 aa5.4□□□□□ -1.54
CALD1-221ENST00000489019 GDF10P55107 478 aa5.4□□□□□ -1.54
CALD1-221ENST00000489019 SLC27A3Q5K4L6 730 aa5.4□□□□□ -1.54
CALD1-221ENST00000489019 USP17L3A6NCW0 530 aa5.39□□□□□ -1.55
CALD1-221ENST00000489019 USP17L4A6NCW7 530 aa5.39□□□□□ -1.55
CALD1-221ENST00000489019 SPATA31C2B4DYI2 1134 aa5.39□□□□□ -1.55
CALD1-221ENST00000489019 INHAP05111 366 aa5.39□□□□□ -1.55
CALD1-221ENST00000489019 ITGA6P23229 1130 aa5.39□□□□□ -1.55
CALD1-221ENST00000489019 ESCO1Q5FWF5 840 aa5.39□□□□□ -1.55
CALD1-221ENST00000489019 NBPF10Q6P3W6 841 aaKnown RBP5.39□□□□□ -1.55
CALD1-221ENST00000489019 USP17L2Q6R6M4 530 aa5.39□□□□□ -1.55
CALD1-221ENST00000489019 USP17L1Q7RTZ2 530 aa5.39□□□□□ -1.55
CALD1-221ENST00000489019 PLEKHM2Q8IWE5 1019 aa5.39□□□□□ -1.55
CALD1-221ENST00000489019 NBPF15Q8N660 670 aa5.39□□□□□ -1.55
CALD1-221ENST00000489019 GPR161Q8N6U8 529 aaKnown RBP5.39□□□□□ -1.55
CALD1-221ENST00000489019 CALR3Q96L12 384 aaKnown RBP5.39□□□□□ -1.55
CALD1-221ENST00000489019 CUEDC1Q9NWM3 386 aaPredicted RBP5.39□□□□□ -1.55
CALD1-221ENST00000489019 TFIP11Q9UBB9 837 aaKnown RBP5.39□□□□□ -1.55
CALD1-221ENST00000489019 ZNF777Q9ULD5 760 aaPredicted RBP5.39□□□□□ -1.55
CALD1-221ENST00000489019 NOD1Q9Y239 953 aa5.39□□□□□ -1.55
CALD1-221ENST00000489019 WASLO00401 505 aaPredicted RBP5.38□□□□□ -1.55
CALD1-221ENST00000489019 LZTS3O60299 673 aaPredicted RBP5.38□□□□□ -1.55
CALD1-221ENST00000489019 GTF2IP78347 998 aa5.38□□□□□ -1.55
CALD1-221ENST00000489019 NANOS1Q8WY41 292 aaKnown RBP5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms