RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 CC2D1BQ5T0F9 858 aaKnown RBP21.76■■□□□ 1.07
CTDSP1-209ENST00000488627 ACSBG1Q96GR2 724 aa21.76■■□□□ 1.07
CTDSP1-209ENST00000488627 RGPD2P0DJD1 1756 aa21.75■■□□□ 1.07
CTDSP1-209ENST00000488627 PROM2Q8N271 834 aa21.74■■□□□ 1.07
CTDSP1-209ENST00000488627 MAP2P11137 1827 aaKnown RBP21.73■■□□□ 1.07
CTDSP1-209ENST00000488627 MTHFSP49914 203 aa21.71■■□□□ 1.07
CTDSP1-209ENST00000488627 IGSF1Q8N6C5 1336 aa21.71■■□□□ 1.07
CTDSP1-209ENST00000488627 CYP27B1O15528 508 aa21.7■■□□□ 1.06
CTDSP1-209ENST00000488627 SBF2Q86WG5 1849 aa21.7■■□□□ 1.06
CTDSP1-209ENST00000488627 IL13P35225 146 aa21.69■■□□□ 1.06
CTDSP1-209ENST00000488627 PSDA5PKW4 1024 aaPredicted RBP21.68■■□□□ 1.06
CTDSP1-209ENST00000488627 PRIM1P49642 420 aaKnown RBP21.68■■□□□ 1.06
CTDSP1-209ENST00000488627 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.68■■□□□ 1.06
CTDSP1-209ENST00000488627 SRCAPQ6ZRS2 3230 aa21.68■■□□□ 1.06
CTDSP1-209ENST00000488627 PCDH11XQ9BZA7 1347 aa21.67■■□□□ 1.06
CTDSP1-209ENST00000488627 PCDH11YQ9BZA8 1340 aa21.67■■□□□ 1.06
CTDSP1-209ENST00000488627 R3HDM1Q15032 1099 aaKnown RBP21.67■■□□□ 1.06
CTDSP1-209ENST00000488627 TXNRD1Q16881 649 aa21.66■■□□□ 1.06
CTDSP1-209ENST00000488627 CNGB1Q14028 1251 aaPredicted RBP21.65■■□□□ 1.06
CTDSP1-209ENST00000488627 SPG7Q9UQ90 795 aa21.65■■□□□ 1.06
CTDSP1-209ENST00000488627 NKX1-1Q15270 411 aaPredicted RBP21.64■■□□□ 1.05
CTDSP1-209ENST00000488627 AEBP1Q8IUX7 1158 aa21.64■■□□□ 1.05
CTDSP1-209ENST00000488627 SHANK3Q9BYB0 1731 aa21.63■■□□□ 1.05
CTDSP1-209ENST00000488627 NHSQ6T4R5 1651 aa21.63■■□□□ 1.05
CTDSP1-209ENST00000488627 NBPF14Q5TI25 921 aa21.63■■□□□ 1.05
CTDSP1-209ENST00000488627 SYTL4Q96C24 671 aaPredicted RBP21.62■■□□□ 1.05
CTDSP1-209ENST00000488627 ANO8Q9HCE9 1232 aaPredicted RBP21.62■■□□□ 1.05
CTDSP1-209ENST00000488627 RREB1Q92766 1687 aa21.62■■□□□ 1.05
CTDSP1-209ENST00000488627 PLEKHG2Q9H7P9 1386 aa21.61■■□□□ 1.05
CTDSP1-209ENST00000488627 SULT6B1Q6IMI4 303 aa21.6■■□□□ 1.05
CTDSP1-209ENST00000488627 KDRP35968 1356 aa21.6■■□□□ 1.05
CTDSP1-209ENST00000488627 PHKG2P15735 406 aa21.59■■□□□ 1.05
CTDSP1-209ENST00000488627 LRRC4BQ9NT99 713 aa21.59■■□□□ 1.05
CTDSP1-209ENST00000488627 RGPD3A6NKT7 1758 aaPredicted RBP21.59■■□□□ 1.05
CTDSP1-209ENST00000488627 RGPD4Q7Z3J3 1758 aa21.59■■□□□ 1.05
CTDSP1-209ENST00000488627 IFNL2Q8IZJ0 200 aa21.58■■□□□ 1.05
CTDSP1-209ENST00000488627 NUP188Q5SRE5 1749 aa21.58■■□□□ 1.04
CTDSP1-209ENST00000488627 DIAPH1O60610 1272 aaKnown RBP21.57■■□□□ 1.04
CTDSP1-209ENST00000488627 PLEKHO1Q53GL0 409 aaPredicted RBP21.57■■□□□ 1.04
CTDSP1-209ENST00000488627 PKD1L3Q7Z443 1732 aa21.56■■□□□ 1.04
CTDSP1-209ENST00000488627 PPP2R1AP30153 589 aa21.55■■□□□ 1.04
CTDSP1-209ENST00000488627 AMOTQ4VCS5 1084 aa21.55■■□□□ 1.04
CTDSP1-209ENST00000488627 COL3A1P02461 1466 aaPredicted RBP21.54■■□□□ 1.04
CTDSP1-209ENST00000488627 ZEB1P37275 1124 aaPredicted RBP21.54■■□□□ 1.04
CTDSP1-209ENST00000488627 SLC27A3Q5K4L6 730 aa21.54■■□□□ 1.04
CTDSP1-209ENST00000488627 MPRIPQ6WCQ1 1025 aa21.54■■□□□ 1.04
CTDSP1-209ENST00000488627 PIGBQ92521 554 aa21.54■■□□□ 1.04
CTDSP1-209ENST00000488627 BTAF1O14981 1849 aa21.53■■□□□ 1.04
CTDSP1-209ENST00000488627 SLC15A2Q16348 729 aa21.53■■□□□ 1.04
CTDSP1-209ENST00000488627 HMOX1P09601 288 aa21.52■■□□□ 1.04
CTDSP1-209ENST00000488627 KCNQ4P56696 695 aa21.52■■□□□ 1.04
CTDSP1-209ENST00000488627 ZNF530Q6P9A1 599 aaPredicted RBP21.51■■□□□ 1.03
CTDSP1-209ENST00000488627 PDGFDQ9GZP0 370 aaPredicted RBP21.51■■□□□ 1.03
CTDSP1-209ENST00000488627 STK32BQ9NY57 414 aa21.51■■□□□ 1.03
CTDSP1-209ENST00000488627 DOT1LQ8TEK3 1739 aa21.51■■□□□ 1.03
CTDSP1-209ENST00000488627 KAT6BQ8WYB5 2073 aa21.51■■□□□ 1.03
CTDSP1-209ENST00000488627 DDX10Q13206 875 aaKnown RBP21.5■■□□□ 1.03
CTDSP1-209ENST00000488627 ZNF827Q17R98 1081 aa21.49■■□□□ 1.03
CTDSP1-209ENST00000488627 AKT1S1Q96B36 256 aa21.49■■□□□ 1.03
CTDSP1-209ENST00000488627 DCAF5Q96JK2 942 aa21.49■■□□□ 1.03
CTDSP1-209ENST00000488627 HSP90AB1P08238 724 aaKnown RBP21.48■■□□□ 1.03
CTDSP1-209ENST00000488627 ERVV-2B6SEH9 535 aa21.47■■□□□ 1.03
CTDSP1-209ENST00000488627 TMOD3Q9NYL9 352 aa21.47■■□□□ 1.03
CTDSP1-209ENST00000488627 CCNL1Q9UK58 526 aaPredicted RBP21.47■■□□□ 1.03
CTDSP1-209ENST00000488627 PALLDQ8WX93 1383 aa21.47■■□□□ 1.03
CTDSP1-209ENST00000488627 KDM6AO15550 1401 aaPredicted RBP21.46■■□□□ 1.03
CTDSP1-209ENST00000488627 TOGARAM1Q9Y4F4 1720 aa21.46■■□□□ 1.03
CTDSP1-209ENST00000488627 U2SURPO15042 1029 aaKnown RBP21.46■■□□□ 1.03
CTDSP1-209ENST00000488627 SMARCC1Q92922 1105 aaPredicted RBP21.46■■□□□ 1.03
CTDSP1-209ENST00000488627 CFAP53Q96M91 514 aa21.46■■□□□ 1.03
CTDSP1-209ENST00000488627 PAPPAQ13219 1627 aa21.45■■□□□ 1.02
CTDSP1-209ENST00000488627 C1orf141Q5JVX7 400 aa21.45■■□□□ 1.02
CTDSP1-209ENST00000488627 ASAP1Q9ULH1 1129 aa21.45■■□□□ 1.02
CTDSP1-209ENST00000488627 MTHFSDQ2M296 383 aaKnown RBP21.44■■□□□ 1.02
CTDSP1-209ENST00000488627 ATG3Q9NT62 314 aa21.44■■□□□ 1.02
CTDSP1-209ENST00000488627 AKAP4Q5JQC9 854 aa21.43■■□□□ 1.02
CTDSP1-209ENST00000488627 RSPH6AQ9H0K4 717 aa21.41■■□□□ 1.02
CTDSP1-209ENST00000488627 LGR6Q9HBX8 967 aa21.41■■□□□ 1.02
CTDSP1-209ENST00000488627 SPON1Q9HCB6 807 aa21.41■■□□□ 1.02
CTDSP1-209ENST00000488627 NUDCQ9Y266 331 aa21.41■■□□□ 1.02
CTDSP1-209ENST00000488627 LRP5O75197 1615 aa21.4■■□□□ 1.02
CTDSP1-209ENST00000488627 LOC102724428A0A0B4J2F2 783 aa21.4■■□□□ 1.02
CTDSP1-209ENST00000488627 SIK1P57059 783 aa21.4■■□□□ 1.02
CTDSP1-209ENST00000488627 CABP4P57796 275 aa21.4■■□□□ 1.02
CTDSP1-209ENST00000488627 LY75O60449 1722 aa21.4■■□□□ 1.02
CTDSP1-209ENST00000488627 ZBTB7AO95365 584 aa21.39■■□□□ 1.01
CTDSP1-209ENST00000488627 RALBP1Q15311 655 aa21.39■■□□□ 1.01
CTDSP1-209ENST00000488627 NFATC2IPQ8NCF5 419 aa21.39■■□□□ 1.01
CTDSP1-209ENST00000488627 PNPLA7Q6ZV29 1317 aa21.38■■□□□ 1.01
CTDSP1-209ENST00000488627 RNMTO43148 476 aaKnown RBP21.38■■□□□ 1.01
CTDSP1-209ENST00000488627 PHACTR3Q96KR7 559 aa21.38■■□□□ 1.01
CTDSP1-209ENST00000488627 ITGB4P16144 1822 aa21.37■■□□□ 1.01
CTDSP1-209ENST00000488627 U2AF1L5P0DN76 240 aaPredicted RBP21.37■■□□□ 1.01
CTDSP1-209ENST00000488627 PRKAR2BP31323 418 aa21.37■■□□□ 1.01
CTDSP1-209ENST00000488627 U2AF1Q01081 240 aaKnown RBP eCLIP21.37■■□□□ 1.01
CTDSP1-209ENST00000488627 SLC4A9Q96Q91 983 aa21.37■■□□□ 1.01
CTDSP1-209ENST00000488627 TFCP2L1Q9NZI6 479 aa21.37■■□□□ 1.01
CTDSP1-209ENST00000488627 FCHSD2O94868 740 aa21.36■■□□□ 1.01
CTDSP1-209ENST00000488627 PTGER2P43116 358 aa21.36■■□□□ 1.01
CTDSP1-209ENST00000488627 ITPK1Q13572 414 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms