RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 KIF24Q5T7B8 1368 aa16.7■□□□□ 0.26
NELFE-209ENST00000488426 IL13P35225 146 aa16.69■□□□□ 0.26
NELFE-209ENST00000488426 PLEKHF1Q96S99 279 aa16.69■□□□□ 0.26
NELFE-209ENST00000488426 FCHSD2O94868 740 aa16.69■□□□□ 0.26
NELFE-209ENST00000488426 CCDC27Q2M243 656 aa16.69■□□□□ 0.26
NELFE-209ENST00000488426 CDCA7LQ96GN5 454 aa16.69■□□□□ 0.26
NELFE-209ENST00000488426 LTN1O94822 1766 aa16.69■□□□□ 0.26
NELFE-209ENST00000488426 EZH2Q15910 746 aaKnown RBP16.68■□□□□ 0.26
NELFE-209ENST00000488426 MARCH10Q8NA82 808 aaPredicted RBP16.68■□□□□ 0.26
NELFE-209ENST00000488426 ERBB3P21860 1342 aa16.68■□□□□ 0.26
NELFE-209ENST00000488426 BAG6P46379 1132 aa16.67■□□□□ 0.26
NELFE-209ENST00000488426 DDB1Q16531 1140 aa16.67■□□□□ 0.26
NELFE-209ENST00000488426 ANKRD24Q8TF21 1146 aa16.67■□□□□ 0.26
NELFE-209ENST00000488426 MAP3K19Q56UN5 1328 aa16.67■□□□□ 0.26
NELFE-209ENST00000488426 MAPK8IP3Q9UPT6 1336 aa16.67■□□□□ 0.26
NELFE-209ENST00000488426 FLT4P35916 1363 aa16.67■□□□□ 0.26
NELFE-209ENST00000488426 LTV1Q96GA3 475 aaPredicted RBP16.67■□□□□ 0.26
NELFE-209ENST00000488426 NLRP2Q9NX02 1062 aa16.67■□□□□ 0.26
NELFE-209ENST00000488426 PARP4Q9UKK3 1724 aaKnown RBP16.67■□□□□ 0.26
NELFE-209ENST00000488426 RGPD1P0DJD0 1748 aa16.66■□□□□ 0.26
NELFE-209ENST00000488426 APBA3O96018 575 aa16.66■□□□□ 0.26
NELFE-209ENST00000488426 FKBP8Q14318 412 aa16.66■□□□□ 0.26
NELFE-209ENST00000488426 WWC1Q8IX03 1113 aa16.66■□□□□ 0.26
NELFE-209ENST00000488426 IP6K1Q92551 441 aa16.66■□□□□ 0.26
NELFE-209ENST00000488426 RNF123Q5XPI4 1314 aa16.66■□□□□ 0.26
NELFE-209ENST00000488426 TNS1Q9HBL0 1735 aaKnown RBP16.66■□□□□ 0.26
NELFE-209ENST00000488426 SLFN5Q08AF3 891 aa16.65■□□□□ 0.26
NELFE-209ENST00000488426 CAMKK2Q96RR4 588 aa16.65■□□□□ 0.26
NELFE-209ENST00000488426 RSPH6AQ9H0K4 717 aa16.65■□□□□ 0.26
NELFE-209ENST00000488426 DISP2A7MBM2 1401 aa16.65■□□□□ 0.26
NELFE-209ENST00000488426 PSDA5PKW4 1024 aaPredicted RBP16.65■□□□□ 0.26
NELFE-209ENST00000488426 E9PSI1 815 aa16.65■□□□□ 0.26
NELFE-209ENST00000488426 LRRC37A3O60309 1634 aa16.65■□□□□ 0.26
NELFE-209ENST00000488426 RTL1A6NKG5 1358 aa16.64■□□□□ 0.25
NELFE-209ENST00000488426 NEFMP07197 916 aa16.64■□□□□ 0.25
NELFE-209ENST00000488426 DUSP27Q5VZP5 1158 aa16.64■□□□□ 0.25
NELFE-209ENST00000488426 TRMT2AQ8IZ69 625 aaKnown RBP16.64■□□□□ 0.25
NELFE-209ENST00000488426 HOXC9P31274 260 aa16.63■□□□□ 0.25
NELFE-209ENST00000488426 EIF4A2Q14240 407 aaKnown RBP16.63■□□□□ 0.25
NELFE-209ENST00000488426 WDR63Q8IWG1 891 aa16.63■□□□□ 0.25
NELFE-209ENST00000488426 RCAN3Q9UKA8 241 aa16.63■□□□□ 0.25
NELFE-209ENST00000488426 PRKAR2BP31323 418 aa16.62■□□□□ 0.25
NELFE-209ENST00000488426 TMPOP42166 694 aaKnown RBP16.62■□□□□ 0.25
NELFE-209ENST00000488426 AMPHP49418 695 aa16.62■□□□□ 0.25
NELFE-209ENST00000488426 ERICH6BQ5W0A0 696 aa16.62■□□□□ 0.25
NELFE-209ENST00000488426 RRP7AQ9Y3A4 280 aaKnown RBP16.62■□□□□ 0.25
NELFE-209ENST00000488426 EXOC5O00471 708 aa16.61■□□□□ 0.25
NELFE-209ENST00000488426 HSP90AB2PQ58FF8 381 aa16.61■□□□□ 0.25
NELFE-209ENST00000488426 WNK3Q9BYP7 1800 aa16.61■□□□□ 0.25
NELFE-209ENST00000488426 ABCC6O95255 1503 aa16.61■□□□□ 0.25
NELFE-209ENST00000488426 NEUROD2Q15784 382 aa16.61■□□□□ 0.25
NELFE-209ENST00000488426 CDCA7Q9BWT1 371 aaPredicted RBP16.6■□□□□ 0.25
NELFE-209ENST00000488426 KCNQ2O43526 872 aa16.59■□□□□ 0.25
NELFE-209ENST00000488426 HMOX1P09601 288 aa16.59■□□□□ 0.25
NELFE-209ENST00000488426 OVOS2A0A0G2JMS6 1433 aa16.59■□□□□ 0.25
NELFE-209ENST00000488426 IL2RBP14784 551 aa16.59■□□□□ 0.25
NELFE-209ENST00000488426 SBF2Q86WG5 1849 aa16.58■□□□□ 0.24
NELFE-209ENST00000488426 R3HDM1Q15032 1099 aaKnown RBP16.58■□□□□ 0.24
NELFE-209ENST00000488426 RGPD2P0DJD1 1756 aa16.58■□□□□ 0.24
NELFE-209ENST00000488426 NBPF6Q5VWK0 638 aa16.57■□□□□ 0.24
NELFE-209ENST00000488426 USHBP1Q8N6Y0 703 aa16.57■□□□□ 0.24
NELFE-209ENST00000488426 NBPF4Q96M43 638 aa16.57■□□□□ 0.24
NELFE-209ENST00000488426 SPINK5Q9NQ38 1064 aaPredicted RBP16.57■□□□□ 0.24
NELFE-209ENST00000488426 IL16Q14005 1332 aa16.57■□□□□ 0.24
NELFE-209ENST00000488426 RIPK4P57078 832 aa16.56■□□□□ 0.24
NELFE-209ENST00000488426 NFE2L2Q16236 605 aa16.56■□□□□ 0.24
NELFE-209ENST00000488426 PROM2Q8N271 834 aa16.56■□□□□ 0.24
NELFE-209ENST00000488426 ACSBG1Q96GR2 724 aa16.56■□□□□ 0.24
NELFE-209ENST00000488426 TRIM35Q9UPQ4 493 aa16.56■□□□□ 0.24
NELFE-209ENST00000488426 KDRP35968 1356 aa16.56■□□□□ 0.24
NELFE-209ENST00000488426 RRP1P56182 461 aaKnown RBP16.55■□□□□ 0.24
NELFE-209ENST00000488426 BCL11BQ9C0K0 894 aaPredicted RBP16.55■□□□□ 0.24
NELFE-209ENST00000488426 IGSF1Q8N6C5 1336 aa16.55■□□□□ 0.24
NELFE-209ENST00000488426 DLG5Q8TDM6 1919 aa16.55■□□□□ 0.24
NELFE-209ENST00000488426 SULT6B1Q6IMI4 303 aa16.54■□□□□ 0.24
NELFE-209ENST00000488426 PHACTR3Q96KR7 559 aa16.54■□□□□ 0.24
NELFE-209ENST00000488426 MYH16Q9H6N6 1097 aa16.54■□□□□ 0.24
NELFE-209ENST00000488426 TNS2Q63HR2 1409 aa16.54■□□□□ 0.24
NELFE-209ENST00000488426 KAT6BQ8WYB5 2073 aa16.53■□□□□ 0.24
NELFE-209ENST00000488426 IRX6P78412 446 aaPredicted RBP16.53■□□□□ 0.24
NELFE-209ENST00000488426 LMOD3Q0VAK6 560 aa16.53■□□□□ 0.24
NELFE-209ENST00000488426 DDX54Q8TDD1 881 aaKnown RBP16.53■□□□□ 0.24
NELFE-209ENST00000488426 AEBP1Q8IUX7 1158 aa16.52■□□□□ 0.24
NELFE-209ENST00000488426 BCL9O00512 1426 aa16.52■□□□□ 0.23
NELFE-209ENST00000488426 CALD1Q05682 793 aaKnown RBP16.52■□□□□ 0.23
NELFE-209ENST00000488426 FAM208AQ9UK61 1670 aaKnown RBP16.51■□□□□ 0.23
NELFE-209ENST00000488426 PLSCR1O15162 318 aa16.51■□□□□ 0.23
NELFE-209ENST00000488426 EYA1Q99502 592 aa16.51■□□□□ 0.23
NELFE-209ENST00000488426 MEGF6O75095 1541 aa16.5■□□□□ 0.23
NELFE-209ENST00000488426 RREB1Q92766 1687 aa16.5■□□□□ 0.23
NELFE-209ENST00000488426 NUP188Q5SRE5 1749 aa16.49■□□□□ 0.23
NELFE-209ENST00000488426 ANO8Q9HCE9 1232 aaPredicted RBP16.49■□□□□ 0.23
NELFE-209ENST00000488426 CT47B1P0C2W7 299 aaPredicted RBP16.48■□□□□ 0.23
NELFE-209ENST00000488426 PDGFDQ9GZP0 370 aaPredicted RBP16.48■□□□□ 0.23
NELFE-209ENST00000488426 FANCIQ9NVI1 1328 aa16.47■□□□□ 0.23
NELFE-209ENST00000488426 ZCRB1Q8TBF4 217 aaKnown RBP16.47■□□□□ 0.23
NELFE-209ENST00000488426 TXNRD1Q16881 649 aa16.46■□□□□ 0.23
NELFE-209ENST00000488426 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.46■□□□□ 0.23
NELFE-209ENST00000488426 PPP4R2Q9NY27 417 aa16.46■□□□□ 0.23
NELFE-209ENST00000488426 NCAPD2Q15021 1401 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms