RNA–Protein interactions for RNA: ENST00000487002.1

FDPS-212, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 2,017 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-212ENST00000487002 NWD1Q149M9 1564 aa21.3■■□□□ 1
FDPS-212ENST00000487002 MCM10Q7L590 875 aa21.3■■□□□ 1
FDPS-212ENST00000487002 SOX12O15370 315 aa21.29■■□□□ 1
FDPS-212ENST00000487002 HTATSF1O43719 755 aaKnown RBP21.29■■□□□ 1
FDPS-212ENST00000487002 DNAJC5Q9H3Z4 198 aa21.29■■□□□ 1
FDPS-212ENST00000487002 NLRP6P59044 892 aa21.28■■□□□ 1
FDPS-212ENST00000487002 LTN1O94822 1766 aa21.28■■□□□ 1
FDPS-212ENST00000487002 NFKBIBQ15653 356 aa21.28■■□□□ 1
FDPS-212ENST00000487002 MTHFSDQ2M296 383 aaKnown RBP21.28■■□□□ 1
FDPS-212ENST00000487002 ANKLE2Q86XL3 938 aa21.28■■□□□ 1
FDPS-212ENST00000487002 RTF1Q92541 710 aaKnown RBP21.28■■□□□ 1
FDPS-212ENST00000487002 EYA1Q99502 592 aa21.28■■□□□ 1
FDPS-212ENST00000487002 BMP2KLQ5H9B9 411 aa21.26■□□□□ 0.99
FDPS-212ENST00000487002 LNPKQ9C0E8 428 aa21.26■□□□□ 0.99
FDPS-212ENST00000487002 SETD1BQ9UPS6 1966 aaKnown RBP21.26■□□□□ 0.99
FDPS-212ENST00000487002 PHRF1Q9P1Y6 1649 aaKnown RBP21.26■□□□□ 0.99
FDPS-212ENST00000487002 TRHP20396 242 aaPredicted RBP21.26■□□□□ 0.99
FDPS-212ENST00000487002 ADGRL3Q9HAR2 1447 aa21.26■□□□□ 0.99
FDPS-212ENST00000487002 HOXC9P31274 260 aa21.25■□□□□ 0.99
FDPS-212ENST00000487002 SIRT2Q8IXJ6 389 aa21.25■□□□□ 0.99
FDPS-212ENST00000487002 C1orf115Q9H7X2 142 aa21.25■□□□□ 0.99
FDPS-212ENST00000487002 FAM208AQ9UK61 1670 aaKnown RBP21.24■□□□□ 0.99
FDPS-212ENST00000487002 C22orf23Q9BZE7 217 aa21.24■□□□□ 0.99
FDPS-212ENST00000487002 CACNA1FO60840 1977 aa21.23■□□□□ 0.99
FDPS-212ENST00000487002 ATP10DQ9P241 1426 aa21.23■□□□□ 0.99
FDPS-212ENST00000487002 NFAT5O94916 1531 aa21.22■□□□□ 0.99
FDPS-212ENST00000487002 ANKRD45Q5TZF3 282 aa21.22■□□□□ 0.99
FDPS-212ENST00000487002 PHF8Q9UPP1 1060 aa21.22■□□□□ 0.99
FDPS-212ENST00000487002 SOS1Q07889 1333 aaPredicted RBP21.22■□□□□ 0.99
FDPS-212ENST00000487002 KRT24Q2M2I5 525 aa21.22■□□□□ 0.99
FDPS-212ENST00000487002 ABTB2Q8N961 1025 aa21.22■□□□□ 0.99
FDPS-212ENST00000487002 TSPYL4Q9UJ04 414 aa21.22■□□□□ 0.99
FDPS-212ENST00000487002 N4BP2Q86UW6 1770 aaPredicted RBP21.22■□□□□ 0.99
FDPS-212ENST00000487002 FOXO3O43524 673 aa21.21■□□□□ 0.99
FDPS-212ENST00000487002 MFAP1P55081 439 aaKnown RBP21.21■□□□□ 0.99
FDPS-212ENST00000487002 RPAP2Q8IXW5 612 aaPredicted RBP21.2■□□□□ 0.98
FDPS-212ENST00000487002 BABAM1Q9NWV8 329 aa21.2■□□□□ 0.98
FDPS-212ENST00000487002 MSH6P52701 1360 aa21.2■□□□□ 0.98
FDPS-212ENST00000487002 MAP3K5Q99683 1374 aa21.19■□□□□ 0.98
FDPS-212ENST00000487002 GNAT3A8MTJ3 354 aa21.19■□□□□ 0.98
FDPS-212ENST00000487002 ANKRD44Q8N8A2 993 aa21.19■□□□□ 0.98
FDPS-212ENST00000487002 TBC1D2Q9BYX2 928 aa21.19■□□□□ 0.98
FDPS-212ENST00000487002 DCTPP1Q9H773 170 aa21.19■□□□□ 0.98
FDPS-212ENST00000487002 RBM25P49756 843 aaKnown RBP21.17■□□□□ 0.98
FDPS-212ENST00000487002 EIF5BO60841 1220 aaKnown RBP21.16■□□□□ 0.98
FDPS-212ENST00000487002 NPHP4O75161 1426 aaPredicted RBP21.16■□□□□ 0.98
FDPS-212ENST00000487002 SLC4A2P04920 1241 aa21.16■□□□□ 0.98
FDPS-212ENST00000487002 ANTXR1Q9H6X2 564 aa21.15■□□□□ 0.98
FDPS-212ENST00000487002 CCT4P50991 539 aaKnown RBP21.14■□□□□ 0.98
FDPS-212ENST00000487002 NUTM2GQ5VZR2 741 aa21.14■□□□□ 0.98
FDPS-212ENST00000487002 MED1Q15648 1581 aaPredicted RBP21.14■□□□□ 0.98
FDPS-212ENST00000487002 CEP85Q6P2H3 762 aa21.14■□□□□ 0.97
FDPS-212ENST00000487002 IP6K1Q92551 441 aa21.14■□□□□ 0.97
FDPS-212ENST00000487002 MIS18AQ9NYP9 233 aa21.13■□□□□ 0.97
FDPS-212ENST00000487002 KCNH5Q8NCM2 988 aa21.12■□□□□ 0.97
FDPS-212ENST00000487002 STK31Q9BXU1 1019 aa21.12■□□□□ 0.97
FDPS-212ENST00000487002 PXDNLA1KZ92 1463 aa21.12■□□□□ 0.97
FDPS-212ENST00000487002 LMO7Q8WWI1 1683 aa21.12■□□□□ 0.97
FDPS-212ENST00000487002 SLIT3O75094 1523 aa21.12■□□□□ 0.97
FDPS-212ENST00000487002 CCDC30Q5VVM6 783 aa21.11■□□□□ 0.97
FDPS-212ENST00000487002 KIF1AQ12756 1690 aa21.1■□□□□ 0.97
FDPS-212ENST00000487002 FRAT2O75474 233 aaPredicted RBP21.1■□□□□ 0.97
FDPS-212ENST00000487002 KDM3BQ7LBC6 1761 aa21.1■□□□□ 0.97
FDPS-212ENST00000487002 HMMRO75330 724 aa21.09■□□□□ 0.97
FDPS-212ENST00000487002 CDC45O75419 566 aa21.09■□□□□ 0.97
FDPS-212ENST00000487002 C14orf37Q86TY3 774 aa21.09■□□□□ 0.97
FDPS-212ENST00000487002 MEIS3Q99687 375 aa21.09■□□□□ 0.97
FDPS-212ENST00000487002 CEMIPQ8WUJ3 1361 aa21.09■□□□□ 0.97
FDPS-212ENST00000487002 TAF7Q15545 349 aaPredicted RBP21.09■□□□□ 0.97
FDPS-212ENST00000487002 PLEKHM2Q8IWE5 1019 aa21.09■□□□□ 0.97
FDPS-212ENST00000487002 SLKQ9H2G2 1235 aaPredicted RBP21.09■□□□□ 0.97
FDPS-212ENST00000487002 TRPM3Q9HCF6 1732 aaPredicted RBP21.09■□□□□ 0.97
FDPS-212ENST00000487002 PSME1Q06323 249 aa21.08■□□□□ 0.97
FDPS-212ENST00000487002 GSE1Q14687 1217 aa21.08■□□□□ 0.97
FDPS-212ENST00000487002 TBC1D9Q6ZT07 1266 aa21.08■□□□□ 0.97
FDPS-212ENST00000487002 IL17REQ8NFR9 667 aa21.08■□□□□ 0.97
FDPS-212ENST00000487002 SNX21Q969T3 373 aa21.08■□□□□ 0.97
FDPS-212ENST00000487002 CAMTA1Q9Y6Y1 1673 aa21.08■□□□□ 0.96
FDPS-212ENST00000487002 NCAPD2Q15021 1401 aa21.08■□□□□ 0.96
FDPS-212ENST00000487002 ESCO1Q5FWF5 840 aa21.07■□□□□ 0.96
FDPS-212ENST00000487002 G2E3Q7L622 706 aa21.07■□□□□ 0.96
FDPS-212ENST00000487002 HSCBQ8IWL3 235 aa21.07■□□□□ 0.96
FDPS-212ENST00000487002 NCOA3Q9Y6Q9 1424 aa21.07■□□□□ 0.96
FDPS-212ENST00000487002 RGPD2P0DJD1 1756 aa21.07■□□□□ 0.96
FDPS-212ENST00000487002 TTC22Q5TAA0 569 aa21.06■□□□□ 0.96
FDPS-212ENST00000487002 LTV1Q96GA3 475 aaPredicted RBP21.06■□□□□ 0.96
FDPS-212ENST00000487002 FLIIQ13045 1269 aa21.05■□□□□ 0.96
FDPS-212ENST00000487002 GSPT1P15170 499 aaKnown RBP21.04■□□□□ 0.96
FDPS-212ENST00000487002 OVOS2A0A0G2JMS6 1433 aa21.04■□□□□ 0.96
FDPS-212ENST00000487002 MST1RQ04912 1400 aa21.04■□□□□ 0.96
FDPS-212ENST00000487002 LMTK3Q96Q04 1460 aa21.03■□□□□ 0.96
FDPS-212ENST00000487002 CHMP4AQ9BY43 222 aa21.03■□□□□ 0.96
FDPS-212ENST00000487002 GNAI2P04899 355 aa21.02■□□□□ 0.96
FDPS-212ENST00000487002 GNAI3P08754 354 aa21.02■□□□□ 0.96
FDPS-212ENST00000487002 SLC4A10Q6U841 1118 aa21.02■□□□□ 0.96
FDPS-212ENST00000487002 F6X3S4 739 aa21.02■□□□□ 0.96
FDPS-212ENST00000487002 HOXB7P09629 217 aa21.02■□□□□ 0.96
FDPS-212ENST00000487002 FKBP5Q13451 457 aaPredicted RBP21.01■□□□□ 0.95
FDPS-212ENST00000487002 NBPF6Q5VWK0 638 aa21.01■□□□□ 0.95
FDPS-212ENST00000487002 USHBP1Q8N6Y0 703 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms