RNA–Protein interactions for RNA: ENST00000486978.5

CTDSPL-208, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 609 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-208ENST00000486978 ABCC6O95255 1503 aa9.24□□□□□ -0.93
CTDSPL-208ENST00000486978 TNRC18O15417 2968 aaPredicted RBP9.24□□□□□ -0.93
CTDSPL-208ENST00000486978 CPSF1Q10570 1443 aaKnown RBP9.23□□□□□ -0.93
CTDSPL-208ENST00000486978 PPIP5K1Q6PFW1 1433 aa9.23□□□□□ -0.93
CTDSPL-208ENST00000486978 QRICH2Q9H0J4 1663 aa9.23□□□□□ -0.93
CTDSPL-208ENST00000486978 KIAA1551Q9HCM1 1747 aa9.23□□□□□ -0.93
CTDSPL-208ENST00000486978 SMIM5Q71RC9 77 aa9.23□□□□□ -0.93
CTDSPL-208ENST00000486978 AMIGO3Q86WK7 504 aa9.23□□□□□ -0.93
CTDSPL-208ENST00000486978 L3MBTL2Q969R5 705 aa9.23□□□□□ -0.93
CTDSPL-208ENST00000486978 CD2APQ9Y5K6 639 aa9.23□□□□□ -0.93
CTDSPL-208ENST00000486978 IGSF1Q8N6C5 1336 aa9.23□□□□□ -0.93
CTDSPL-208ENST00000486978 SOX12O15370 315 aa9.22□□□□□ -0.93
CTDSPL-208ENST00000486978 HSPA1AP0DMV8 641 aaKnown RBP9.22□□□□□ -0.93
CTDSPL-208ENST00000486978 HSPA1BP0DMV9 641 aaKnown RBP9.22□□□□□ -0.93
CTDSPL-208ENST00000486978 CSB-PGBD3P0DP91 1061 aa9.22□□□□□ -0.93
CTDSPL-208ENST00000486978 NEUROD1Q13562 356 aa9.22□□□□□ -0.93
CTDSPL-208ENST00000486978 NBPF1Q3BBV0 1214 aa9.22□□□□□ -0.93
CTDSPL-208ENST00000486978 CICQ96RK0 1608 aaPredicted RBP9.22□□□□□ -0.93
CTDSPL-208ENST00000486978 NSD2O96028 1365 aa9.22□□□□□ -0.93
CTDSPL-208ENST00000486978 N4BP2Q86UW6 1770 aaPredicted RBP9.22□□□□□ -0.93
CTDSPL-208ENST00000486978 USP54Q70EL1 1684 aa9.21□□□□□ -0.93
CTDSPL-208ENST00000486978 SLC27A3Q5K4L6 730 aa9.21□□□□□ -0.94
CTDSPL-208ENST00000486978 FOXD4L1Q9NU39 408 aa9.21□□□□□ -0.94
CTDSPL-208ENST00000486978 ERBB3P21860 1342 aa9.21□□□□□ -0.94
CTDSPL-208ENST00000486978 TAF1LQ8IZX4 1826 aa9.21□□□□□ -0.94
CTDSPL-208ENST00000486978 DOT1LQ8TEK3 1739 aa9.2□□□□□ -0.94
CTDSPL-208ENST00000486978 TOGARAM1Q9Y4F4 1720 aa9.2□□□□□ -0.94
CTDSPL-208ENST00000486978 NFAT5O94916 1531 aa9.2□□□□□ -0.94
CTDSPL-208ENST00000486978 RBM46Q8TBY0 533 aaKnown RBP9.19□□□□□ -0.94
CTDSPL-208ENST00000486978 CABP2Q9NPB3 220 aa9.19□□□□□ -0.94
CTDSPL-208ENST00000486978 CCDC7Q96M83 1385 aa9.19□□□□□ -0.94
CTDSPL-208ENST00000486978 C5P01031 1676 aa9.18□□□□□ -0.94
CTDSPL-208ENST00000486978 PRIM1P49642 420 aaKnown RBP9.18□□□□□ -0.94
CTDSPL-208ENST00000486978 CENPJQ9HC77 1338 aaPredicted RBP9.18□□□□□ -0.94
CTDSPL-208ENST00000486978 CABP1Q9NZU7 370 aa9.18□□□□□ -0.94
CTDSPL-208ENST00000486978 PCDH10Q9P2E7 1040 aa9.18□□□□□ -0.94
CTDSPL-208ENST00000486978 ROCK2O75116 1388 aaKnown RBP9.17□□□□□ -0.94
CTDSPL-208ENST00000486978 IL2RBP14784 551 aa9.17□□□□□ -0.94
CTDSPL-208ENST00000486978 DDX54Q8TDD1 881 aaKnown RBP9.17□□□□□ -0.94
CTDSPL-208ENST00000486978 LTN1O94822 1766 aa9.17□□□□□ -0.94
CTDSPL-208ENST00000486978 RGPD2P0DJD1 1756 aa9.17□□□□□ -0.94
CTDSPL-208ENST00000486978 TONSLQ96HA7 1378 aa9.16□□□□□ -0.94
CTDSPL-208ENST00000486978 MYCNP04198 464 aaPredicted RBP9.16□□□□□ -0.94
CTDSPL-208ENST00000486978 SYTL4Q96C24 671 aaPredicted RBP9.16□□□□□ -0.94
CTDSPL-208ENST00000486978 SPINK5Q9NQ38 1064 aaPredicted RBP9.16□□□□□ -0.94
CTDSPL-208ENST00000486978 NLRP2Q9NX02 1062 aa9.16□□□□□ -0.94
CTDSPL-208ENST00000486978 CCNL1Q9UK58 526 aaPredicted RBP9.16□□□□□ -0.94
CTDSPL-208ENST00000486978 UBR3Q6ZT12 1888 aa9.16□□□□□ -0.94
CTDSPL-208ENST00000486978 KIF13BQ9NQT8 1826 aa9.16□□□□□ -0.94
CTDSPL-208ENST00000486978 PKD1L3Q7Z443 1732 aa9.16□□□□□ -0.94
CTDSPL-208ENST00000486978 KCPQ6ZWJ8 1503 aa9.15□□□□□ -0.94
CTDSPL-208ENST00000486978 BRCA1P38398 1863 aaKnown RBP9.15□□□□□ -0.94
CTDSPL-208ENST00000486978 FAM161AQ3B820 660 aa9.15□□□□□ -0.94
CTDSPL-208ENST00000486978 RRAGCQ9HB90 399 aa9.15□□□□□ -0.94
CTDSPL-208ENST00000486978 SBF1O95248 1867 aa9.15□□□□□ -0.95
CTDSPL-208ENST00000486978 TTC21BQ7Z4L5 1316 aa9.14□□□□□ -0.95
CTDSPL-208ENST00000486978 SRPK2P78362 688 aaKnown RBP9.14□□□□□ -0.95
CTDSPL-208ENST00000486978 FSTL1Q12841 308 aa9.14□□□□□ -0.95
CTDSPL-208ENST00000486978 SAMD1Q6SPF0 538 aaPredicted RBP9.14□□□□□ -0.95
CTDSPL-208ENST00000486978 PXDNLA1KZ92 1463 aa9.14□□□□□ -0.95
CTDSPL-208ENST00000486978 ANKRD36BQ8N2N9 1353 aa9.13□□□□□ -0.95
CTDSPL-208ENST00000486978 ZBTB22O15209 634 aa9.13□□□□□ -0.95
CTDSPL-208ENST00000486978 ARHGAP27Q6ZUM4 889 aa9.13□□□□□ -0.95
CTDSPL-208ENST00000486978 EVC2Q86UK5 1308 aa9.12□□□□□ -0.95
CTDSPL-208ENST00000486978 C4BP0C0L5 1744 aa9.12□□□□□ -0.95
CTDSPL-208ENST00000486978 A0A0G2JLW4 131 aa9.12□□□□□ -0.95
CTDSPL-208ENST00000486978 C9orf131Q5VYM1 1079 aa9.12□□□□□ -0.95
CTDSPL-208ENST00000486978 ANKRD24Q8TF21 1146 aa9.12□□□□□ -0.95
CTDSPL-208ENST00000486978 FOXN1O15353 648 aa9.11□□□□□ -0.95
CTDSPL-208ENST00000486978 KCNH5Q8NCM2 988 aa9.11□□□□□ -0.95
CTDSPL-208ENST00000486978 CARD11Q9BXL7 1154 aa9.11□□□□□ -0.95
CTDSPL-208ENST00000486978 BCS1LQ9Y276 419 aa9.11□□□□□ -0.95
CTDSPL-208ENST00000486978 SBNO2Q9Y2G9 1366 aa9.11□□□□□ -0.95
CTDSPL-208ENST00000486978 FAM208AQ9UK61 1670 aaKnown RBP9.1□□□□□ -0.95
CTDSPL-208ENST00000486978 ARFGEF1Q9Y6D6 1849 aa9.1□□□□□ -0.95
CTDSPL-208ENST00000486978 C16orf71Q8IYS4 520 aaPredicted RBP9.1□□□□□ -0.95
CTDSPL-208ENST00000486978 TNRC6CQ9HCJ0 1690 aaKnown RBP9.1□□□□□ -0.95
CTDSPL-208ENST00000486978 PHF14O94880 888 aa9.09□□□□□ -0.95
CTDSPL-208ENST00000486978 KCNA3P22001 575 aa9.09□□□□□ -0.95
CTDSPL-208ENST00000486978 MAP2P11137 1827 aaKnown RBP9.09□□□□□ -0.95
CTDSPL-208ENST00000486978 ITGB4P16144 1822 aa9.09□□□□□ -0.95
CTDSPL-208ENST00000486978 C10orf71Q711Q0 1435 aa9.08□□□□□ -0.96
CTDSPL-208ENST00000486978 DPEP1P16444 411 aa9.08□□□□□ -0.96
CTDSPL-208ENST00000486978 CCDC88AQ3V6T2 1871 aa9.08□□□□□ -0.96
CTDSPL-208ENST00000486978 CLSPNQ9HAW4 1339 aa9.07□□□□□ -0.96
CTDSPL-208ENST00000486978 MEGF6O75095 1541 aa9.07□□□□□ -0.96
CTDSPL-208ENST00000486978 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.07□□□□□ -0.96
CTDSPL-208ENST00000486978 SMC1BQ8NDV3 1235 aa9.07□□□□□ -0.96
CTDSPL-208ENST00000486978 LTV1Q96GA3 475 aaPredicted RBP9.07□□□□□ -0.96
CTDSPL-208ENST00000486978 PCGF6Q9BYE7 350 aa9.07□□□□□ -0.96
CTDSPL-208ENST00000486978 USP47Q96K76 1375 aa9.07□□□□□ -0.96
CTDSPL-208ENST00000486978 FCHSD2O94868 740 aa9.06□□□□□ -0.96
CTDSPL-208ENST00000486978 NME9Q86XW9 330 aa9.06□□□□□ -0.96
CTDSPL-208ENST00000486978 MKRN1Q9UHC7 482 aaKnown RBP9.06□□□□□ -0.96
CTDSPL-208ENST00000486978 MON2Q7Z3U7 1717 aa9.05□□□□□ -0.96
CTDSPL-208ENST00000486978 VIRMAQ69YN4 1812 aaKnown RBP9.05□□□□□ -0.96
CTDSPL-208ENST00000486978 POTECB2RU33 542 aa9.05□□□□□ -0.96
CTDSPL-208ENST00000486978 MMP10P09238 476 aa9.05□□□□□ -0.96
CTDSPL-208ENST00000486978 FBLN1P23142 703 aa9.05□□□□□ -0.96
CTDSPL-208ENST00000486978 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms