RNA–Protein interactions for RNA: ENST00000486585.1

PCMT1-208, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase, human

TSL 3

Gene PCMT1, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCMT1-208	ENST00000486585	UTRN	P46939	3433 aa		13.84	□□□□□ -0.19
PCMT1-208	ENST00000486585	DOT1L	Q8TEK3	1739 aa		13.84	□□□□□ -0.19
PCMT1-208	ENST00000486585	HOXC9	P31274	260 aa		13.83	□□□□□ -0.2
PCMT1-208	ENST00000486585	C1QTNF8	P60827	252 aa		13.83	□□□□□ -0.2
PCMT1-208	ENST00000486585	KLHL34	Q8N239	644 aa		13.83	□□□□□ -0.2
PCMT1-208	ENST00000486585	MAP3K19	Q56UN5	1328 aa		13.83	□□□□□ -0.2
PCMT1-208	ENST00000486585	PNPLA7	Q6ZV29	1317 aa		13.83	□□□□□ -0.2
PCMT1-208	ENST00000486585	TUBGCP6	Q96RT7	1819 aa		13.83	□□□□□ -0.2
PCMT1-208	ENST00000486585	RGPD2	P0DJD1	1756 aa		13.82	□□□□□ -0.2
PCMT1-208	ENST00000486585	RTL1	A6NKG5	1358 aa		13.82	□□□□□ -0.2
PCMT1-208	ENST00000486585	USP47	Q96K76	1375 aa		13.82	□□□□□ -0.2
PCMT1-208	ENST00000486585	SMG6	Q86US8	1419 aa	Known RBP	13.81	□□□□□ -0.2
PCMT1-208	ENST00000486585	SENP3-EIF4A1	A0A087X0R7	540 aa		13.81	□□□□□ -0.2
PCMT1-208	ENST00000486585	GRIN3B	O60391	1043 aa		13.81	□□□□□ -0.2
PCMT1-208	ENST00000486585	PELP1	Q8IZL8	1130 aa	Known RBP	13.81	□□□□□ -0.2
PCMT1-208	ENST00000486585	RAPGEF4	Q8WZA2	1011 aa		13.81	□□□□□ -0.2
PCMT1-208	ENST00000486585	CCNL1	Q9UK58	526 aa	Predicted RBP	13.81	□□□□□ -0.2
PCMT1-208	ENST00000486585	MSH5	O43196	834 aa		13.8	□□□□□ -0.2
PCMT1-208	ENST00000486585	SHANK3	Q9BYB0	1731 aa		13.79	□□□□□ -0.2
PCMT1-208	ENST00000486585	ST20-MTHFS	A0A0A6YYL1	179 aa		13.79	□□□□□ -0.2
PCMT1-208	ENST00000486585	FLAD1	Q8NFF5	587 aa		13.79	□□□□□ -0.2
PCMT1-208	ENST00000486585	TESK2	Q96S53	571 aa		13.79	□□□□□ -0.2
PCMT1-208	ENST00000486585	GIGYF1	O75420	1035 aa	Predicted RBP	13.78	□□□□□ -0.2
PCMT1-208	ENST00000486585	TAT	P17735	454 aa	Predicted RBP	13.78	□□□□□ -0.2
PCMT1-208	ENST00000486585	MEGF6	O75095	1541 aa		13.77	□□□□□ -0.21
PCMT1-208	ENST00000486585	NSD2	O96028	1365 aa		13.77	□□□□□ -0.21
PCMT1-208	ENST00000486585	KCNQ4	P56696	695 aa		13.77	□□□□□ -0.21
PCMT1-208	ENST00000486585	CDCA8	Q53HL2	280 aa		13.77	□□□□□ -0.21
PCMT1-208	ENST00000486585	KIF24	Q5T7B8	1368 aa		13.76	□□□□□ -0.21
PCMT1-208	ENST00000486585	PCDH11X	Q9BZA7	1347 aa		13.76	□□□□□ -0.21
PCMT1-208	ENST00000486585	PCDH11Y	Q9BZA8	1340 aa		13.76	□□□□□ -0.21
PCMT1-208	ENST00000486585	TMF1	P82094	1093 aa		13.76	□□□□□ -0.21
PCMT1-208	ENST00000486585	NBPF6	Q5VWK0	638 aa		13.76	□□□□□ -0.21
PCMT1-208	ENST00000486585	NBPF4	Q96M43	638 aa		13.76	□□□□□ -0.21
PCMT1-208	ENST00000486585	C5	P01031	1676 aa		13.75	□□□□□ -0.21
PCMT1-208	ENST00000486585	FYB1	O15117	783 aa		13.75	□□□□□ -0.21
PCMT1-208	ENST00000486585	RRS1	Q15050	365 aa	Known RBP	13.75	□□□□□ -0.21
PCMT1-208	ENST00000486585	COL23A1	Q86Y22	540 aa	Predicted RBP	13.75	□□□□□ -0.21
PCMT1-208	ENST00000486585	TAF1L	Q8IZX4	1826 aa		13.75	□□□□□ -0.21
PCMT1-208	ENST00000486585	INSR	P06213	1382 aa		13.74	□□□□□ -0.21
PCMT1-208	ENST00000486585	KIF20B	Q96Q89	1820 aa		13.74	□□□□□ -0.21
PCMT1-208	ENST00000486585	NLGN2	Q8NFZ4	835 aa		13.74	□□□□□ -0.21
PCMT1-208	ENST00000486585	SMARCC1	Q92922	1105 aa	Predicted RBP	13.74	□□□□□ -0.21
PCMT1-208	ENST00000486585	CD2AP	Q9Y5K6	639 aa		13.74	□□□□□ -0.21
PCMT1-208	ENST00000486585	FLT4	P35916	1363 aa		13.73	□□□□□ -0.21
PCMT1-208	ENST00000486585	FBLN1	P23142	703 aa		13.73	□□□□□ -0.21
PCMT1-208	ENST00000486585	GGNBP2	Q9H3C7	697 aa		13.73	□□□□□ -0.21
PCMT1-208	ENST00000486585	NSD3	Q9BZ95	1437 aa		13.73	□□□□□ -0.21
PCMT1-208	ENST00000486585	GOLGB1	Q14789	3259 aa	Known RBP	13.72	□□□□□ -0.21
PCMT1-208	ENST00000486585	ITGB4	P16144	1822 aa		13.72	□□□□□ -0.21
PCMT1-208	ENST00000486585	PALLD	Q8WX93	1383 aa		13.71	□□□□□ -0.21
PCMT1-208	ENST00000486585	MPRIP	Q6WCQ1	1025 aa		13.71	□□□□□ -0.21
PCMT1-208	ENST00000486585	USHBP1	Q8N6Y0	703 aa		13.71	□□□□□ -0.21
PCMT1-208	ENST00000486585	YBX3	P16989	372 aa	Known RBP eCLIP	13.7	□□□□□ -0.22
PCMT1-208	ENST00000486585	HSP90AB2P	Q58FF8	381 aa		13.7	□□□□□ -0.22
PCMT1-208	ENST00000486585	MSL1	Q68DK7	614 aa		13.7	□□□□□ -0.22
PCMT1-208	ENST00000486585	AK7	Q96M32	723 aa		13.7	□□□□□ -0.22
PCMT1-208	ENST00000486585	SPG7	Q9UQ90	795 aa		13.69	□□□□□ -0.22
PCMT1-208	ENST00000486585	C4B	P0C0L5	1744 aa		13.68	□□□□□ -0.22
PCMT1-208	ENST00000486585	PKD1L3	Q7Z443	1732 aa		13.68	□□□□□ -0.22
PCMT1-208	ENST00000486585	UBR3	Q6ZT12	1888 aa		13.67	□□□□□ -0.22
PCMT1-208	ENST00000486585	CYP27B1	O15528	508 aa		13.67	□□□□□ -0.22
PCMT1-208	ENST00000486585	GPBP1L1	Q9HC44	474 aa	Predicted RBP	13.67	□□□□□ -0.22
PCMT1-208	ENST00000486585	MAP2	P11137	1827 aa	Known RBP	13.67	□□□□□ -0.22
PCMT1-208	ENST00000486585	SSFA2	P28290	1259 aa		13.66	□□□□□ -0.22
PCMT1-208	ENST00000486585	NKX1-1	Q15270	411 aa	Predicted RBP	13.66	□□□□□ -0.22
PCMT1-208	ENST00000486585	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	13.66	□□□□□ -0.22
PCMT1-208	ENST00000486585	ATP10D	Q9P241	1426 aa		13.65	□□□□□ -0.22
PCMT1-208	ENST00000486585	PIGB	Q92521	554 aa		13.65	□□□□□ -0.22
PCMT1-208	ENST00000486585	TOGARAM1	Q9Y4F4	1720 aa		13.64	□□□□□ -0.23
PCMT1-208	ENST00000486585	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	13.64	□□□□□ -0.23
PCMT1-208	ENST00000486585	PPM1G	O15355	546 aa	Predicted RBP	13.64	□□□□□ -0.23
PCMT1-208	ENST00000486585	TMOD3	Q9NYL9	352 aa		13.64	□□□□□ -0.23
PCMT1-208	ENST00000486585	LOC102724428	A0A0B4J2F2	783 aa		13.63	□□□□□ -0.23
PCMT1-208	ENST00000486585	PHF14	O94880	888 aa		13.63	□□□□□ -0.23
PCMT1-208	ENST00000486585	SIK1	P57059	783 aa		13.63	□□□□□ -0.23
PCMT1-208	ENST00000486585	EMILIN1	Q9Y6C2	1016 aa		13.63	□□□□□ -0.23
PCMT1-208	ENST00000486585	ANKRD26	Q9UPS8	1709 aa		13.63	□□□□□ -0.23
PCMT1-208	ENST00000486585	NCAPD2	Q15021	1401 aa		13.63	□□□□□ -0.23
PCMT1-208	ENST00000486585	WASHC2A	Q641Q2	1341 aa		13.63	□□□□□ -0.23
PCMT1-208	ENST00000486585	PLEKHG2	Q9H7P9	1386 aa		13.62	□□□□□ -0.23
PCMT1-208	ENST00000486585	IFNL2	Q8IZJ0	200 aa		13.62	□□□□□ -0.23
PCMT1-208	ENST00000486585	IGSF1	Q8N6C5	1336 aa		13.62	□□□□□ -0.23
PCMT1-208	ENST00000486585	CEP350	Q5VT06	3117 aa		13.61	□□□□□ -0.23
PCMT1-208	ENST00000486585	CARD14	Q9BXL6	1004 aa		13.61	□□□□□ -0.23
PCMT1-208	ENST00000486585	ADCY9	O60503	1353 aa		13.6	□□□□□ -0.23
PCMT1-208	ENST00000486585	ATP6V1A	P38606	617 aa		13.6	□□□□□ -0.23
PCMT1-208	ENST00000486585	IFFO2	Q5TF58	517 aa		13.6	□□□□□ -0.23
PCMT1-208	ENST00000486585	GNPAT	O15228	680 aa		13.59	□□□□□ -0.23
PCMT1-208	ENST00000486585	EYA1	Q99502	592 aa		13.59	□□□□□ -0.23
PCMT1-208	ENST00000486585	TIMELESS	Q9UNS1	1208 aa		13.59	□□□□□ -0.23
PCMT1-208	ENST00000486585	HSP90AB1	P08238	724 aa	Known RBP	13.58	□□□□□ -0.24
PCMT1-208	ENST00000486585	PHKG2	P15735	406 aa		13.58	□□□□□ -0.24
PCMT1-208	ENST00000486585	HSPA6	P17066	643 aa		13.58	□□□□□ -0.24
PCMT1-208	ENST00000486585	NLGN1	Q8N2Q7	840 aa		13.58	□□□□□ -0.24
PCMT1-208	ENST00000486585	LINC00116	Q8NCU8	138 aa		13.58	□□□□□ -0.24
PCMT1-208	ENST00000486585	ZNF526	Q8TF50	670 aa	Predicted RBP	13.58	□□□□□ -0.24
PCMT1-208	ENST00000486585	ASAP1	Q9ULH1	1129 aa		13.58	□□□□□ -0.24
PCMT1-208	ENST00000486585	ZNF831	Q5JPB2	1677 aa		13.58	□□□□□ -0.24
PCMT1-208	ENST00000486585	KIF13B	Q9NQT8	1826 aa		13.57	□□□□□ -0.24

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