RNA–Protein interactions for RNA: ENST00000486044.1

PDE6D-205, Transcript of phosphodiesterase 6D, humanhuman

TSL 2

Gene PDE6D, Length 1,005 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-205ENST00000486044 TONSLQ96HA7 1378 aa22.78■■□□□ 1.24
PDE6D-205ENST00000486044 SENP3-EIF4A1A0A087X0R7 540 aa22.78■■□□□ 1.24
PDE6D-205ENST00000486044 HOXC9P31274 260 aa22.78■■□□□ 1.24
PDE6D-205ENST00000486044 PELP1Q8IZL8 1130 aaKnown RBP22.77■■□□□ 1.24
PDE6D-205ENST00000486044 HMGB2P26583 209 aaKnown RBP22.76■■□□□ 1.23
PDE6D-205ENST00000486044 KCNQ4P56696 695 aa22.76■■□□□ 1.23
PDE6D-205ENST00000486044 CCNL1Q9UK58 526 aaPredicted RBP22.75■■□□□ 1.23
PDE6D-205ENST00000486044 CGNL1Q0VF96 1302 aa22.74■■□□□ 1.23
PDE6D-205ENST00000486044 COL24A1Q17RW2 1714 aa22.74■■□□□ 1.23
PDE6D-205ENST00000486044 MSH5O43196 834 aa22.73■■□□□ 1.23
PDE6D-205ENST00000486044 DOT1LQ8TEK3 1739 aa22.73■■□□□ 1.23
PDE6D-205ENST00000486044 USP47Q96K76 1375 aa22.73■■□□□ 1.23
PDE6D-205ENST00000486044 LY75O60449 1722 aa22.72■■□□□ 1.23
PDE6D-205ENST00000486044 ST20-MTHFSA0A0A6YYL1 179 aa22.72■■□□□ 1.23
PDE6D-205ENST00000486044 TESK2Q96S53 571 aa22.72■■□□□ 1.23
PDE6D-205ENST00000486044 GRIN3BO60391 1043 aa22.71■■□□□ 1.23
PDE6D-205ENST00000486044 FBLN1P23142 703 aa22.71■■□□□ 1.23
PDE6D-205ENST00000486044 RAPGEF4Q8WZA2 1011 aa22.71■■□□□ 1.23
PDE6D-205ENST00000486044 RTL1A6NKG5 1358 aa22.71■■□□□ 1.23
PDE6D-205ENST00000486044 NSD2O96028 1365 aa22.71■■□□□ 1.23
PDE6D-205ENST00000486044 GIGYF1O75420 1035 aaPredicted RBP22.7■■□□□ 1.22
PDE6D-205ENST00000486044 TUBGCP6Q96RT7 1819 aa22.69■■□□□ 1.22
PDE6D-205ENST00000486044 MEGF6O75095 1541 aa22.69■■□□□ 1.22
PDE6D-205ENST00000486044 SMG6Q86US8 1419 aaKnown RBP22.69■■□□□ 1.22
PDE6D-205ENST00000486044 NLGN2Q8NFZ4 835 aa22.69■■□□□ 1.22
PDE6D-205ENST00000486044 NBPF6Q5VWK0 638 aa22.68■■□□□ 1.22
PDE6D-205ENST00000486044 COL23A1Q86Y22 540 aaPredicted RBP22.68■■□□□ 1.22
PDE6D-205ENST00000486044 NBPF4Q96M43 638 aa22.68■■□□□ 1.22
PDE6D-205ENST00000486044 RGPD2P0DJD1 1756 aa22.68■■□□□ 1.22
PDE6D-205ENST00000486044 TATP17735 454 aaPredicted RBP22.67■■□□□ 1.22
PDE6D-205ENST00000486044 RRS1Q15050 365 aaKnown RBP22.67■■□□□ 1.22
PDE6D-205ENST00000486044 SHANK3Q9BYB0 1731 aa22.67■■□□□ 1.22
PDE6D-205ENST00000486044 FLAD1Q8NFF5 587 aa22.66■■□□□ 1.22
PDE6D-205ENST00000486044 FYB1O15117 783 aa22.65■■□□□ 1.22
PDE6D-205ENST00000486044 GGNBP2Q9H3C7 697 aa22.64■■□□□ 1.21
PDE6D-205ENST00000486044 PCDH11XQ9BZA7 1347 aa22.63■■□□□ 1.21
PDE6D-205ENST00000486044 PCDH11YQ9BZA8 1340 aa22.63■■□□□ 1.21
PDE6D-205ENST00000486044 TMF1P82094 1093 aa22.63■■□□□ 1.21
PDE6D-205ENST00000486044 USHBP1Q8N6Y0 703 aa22.63■■□□□ 1.21
PDE6D-205ENST00000486044 GOLGB1Q14789 3259 aaKnown RBP22.62■■□□□ 1.21
PDE6D-205ENST00000486044 YBX3P16989 372 aaKnown RBP eCLIP22.61■■□□□ 1.21
PDE6D-205ENST00000486044 MSL1Q68DK7 614 aa22.61■■□□□ 1.21
PDE6D-205ENST00000486044 CD2APQ9Y5K6 639 aa22.61■■□□□ 1.21
PDE6D-205ENST00000486044 INSRP06213 1382 aa22.61■■□□□ 1.21
PDE6D-205ENST00000486044 MPRIPQ6WCQ1 1025 aa22.6■■□□□ 1.21
PDE6D-205ENST00000486044 KIF24Q5T7B8 1368 aa22.6■■□□□ 1.21
PDE6D-205ENST00000486044 CDCA8Q53HL2 280 aa22.59■■□□□ 1.21
PDE6D-205ENST00000486044 HSP90AB2PQ58FF8 381 aa22.59■■□□□ 1.21
PDE6D-205ENST00000486044 SMARCC1Q92922 1105 aaPredicted RBP22.59■■□□□ 1.21
PDE6D-205ENST00000486044 PALLDQ8WX93 1383 aa22.59■■□□□ 1.21
PDE6D-205ENST00000486044 FLT4P35916 1363 aa22.58■■□□□ 1.21
PDE6D-205ENST00000486044 C5P01031 1676 aa22.58■■□□□ 1.2
PDE6D-205ENST00000486044 AK7Q96M32 723 aa22.55■■□□□ 1.2
PDE6D-205ENST00000486044 CYP27B1O15528 508 aa22.53■■□□□ 1.2
PDE6D-205ENST00000486044 NSD3Q9BZ95 1437 aa22.53■■□□□ 1.2
PDE6D-205ENST00000486044 TAF1LQ8IZX4 1826 aa22.52■■□□□ 1.2
PDE6D-205ENST00000486044 SPG7Q9UQ90 795 aa22.52■■□□□ 1.2
PDE6D-205ENST00000486044 GPBP1L1Q9HC44 474 aaPredicted RBP22.51■■□□□ 1.19
PDE6D-205ENST00000486044 KIF20BQ96Q89 1820 aa22.51■■□□□ 1.19
PDE6D-205ENST00000486044 ATP10DQ9P241 1426 aa22.5■■□□□ 1.19
PDE6D-205ENST00000486044 C4BP0C0L5 1744 aa22.49■■□□□ 1.19
PDE6D-205ENST00000486044 ITGB4P16144 1822 aa22.48■■□□□ 1.19
PDE6D-205ENST00000486044 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.48■■□□□ 1.19
PDE6D-205ENST00000486044 PPM1GO15355 546 aaPredicted RBP22.48■■□□□ 1.19
PDE6D-205ENST00000486044 NKX1-1Q15270 411 aaPredicted RBP22.48■■□□□ 1.19
PDE6D-205ENST00000486044 PIGBQ92521 554 aa22.48■■□□□ 1.19
PDE6D-205ENST00000486044 PHF14O94880 888 aa22.47■■□□□ 1.19
PDE6D-205ENST00000486044 SSFA2P28290 1259 aa22.47■■□□□ 1.19
PDE6D-205ENST00000486044 EMILIN1Q9Y6C2 1016 aa22.47■■□□□ 1.19
PDE6D-205ENST00000486044 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.46■■□□□ 1.19
PDE6D-205ENST00000486044 PKD1L3Q7Z443 1732 aa22.45■■□□□ 1.19
PDE6D-205ENST00000486044 LOC102724428A0A0B4J2F2 783 aa22.45■■□□□ 1.18
PDE6D-205ENST00000486044 SIK1P57059 783 aa22.45■■□□□ 1.18
PDE6D-205ENST00000486044 CARD14Q9BXL6 1004 aa22.45■■□□□ 1.18
PDE6D-205ENST00000486044 TMOD3Q9NYL9 352 aa22.45■■□□□ 1.18
PDE6D-205ENST00000486044 IGSF1Q8N6C5 1336 aa22.44■■□□□ 1.18
PDE6D-205ENST00000486044 TOGARAM1Q9Y4F4 1720 aa22.44■■□□□ 1.18
PDE6D-205ENST00000486044 WASHC2AQ641Q2 1341 aa22.43■■□□□ 1.18
PDE6D-205ENST00000486044 AMIGO3Q86WK7 504 aa22.43■■□□□ 1.18
PDE6D-205ENST00000486044 UBR3Q6ZT12 1888 aa22.43■■□□□ 1.18
PDE6D-205ENST00000486044 NCAPD2Q15021 1401 aa22.42■■□□□ 1.18
PDE6D-205ENST00000486044 IFFO2Q5TF58 517 aa22.42■■□□□ 1.18
PDE6D-205ENST00000486044 ADCY9O60503 1353 aa22.41■■□□□ 1.18
PDE6D-205ENST00000486044 IFNL2Q8IZJ0 200 aa22.41■■□□□ 1.18
PDE6D-205ENST00000486044 LINC00116Q8NCU8 138 aa22.41■■□□□ 1.18
PDE6D-205ENST00000486044 ZNF526Q8TF50 670 aaPredicted RBP22.41■■□□□ 1.18
PDE6D-205ENST00000486044 CEP350Q5VT06 3117 aa22.4■■□□□ 1.18
PDE6D-205ENST00000486044 GNPATO15228 680 aa22.4■■□□□ 1.18
PDE6D-205ENST00000486044 ATP6V1AP38606 617 aa22.4■■□□□ 1.18
PDE6D-205ENST00000486044 EYA1Q99502 592 aa22.4■■□□□ 1.18
PDE6D-205ENST00000486044 SMIM5Q71RC9 77 aa22.39■■□□□ 1.17
PDE6D-205ENST00000486044 ASAP1Q9ULH1 1129 aa22.39■■□□□ 1.17
PDE6D-205ENST00000486044 HSPA6P17066 643 aa22.38■■□□□ 1.17
PDE6D-205ENST00000486044 WWC3Q9ULE0 1092 aa22.38■■□□□ 1.17
PDE6D-205ENST00000486044 MAP2P11137 1827 aaKnown RBP22.38■■□□□ 1.17
PDE6D-205ENST00000486044 PHKG2P15735 406 aa22.37■■□□□ 1.17
PDE6D-205ENST00000486044 ITPK1Q13572 414 aa22.36■■□□□ 1.17
PDE6D-205ENST00000486044 ANKRD26Q9UPS8 1709 aa22.36■■□□□ 1.17
PDE6D-205ENST00000486044 MMP10P09238 476 aa22.35■■□□□ 1.17
PDE6D-205ENST00000486044 ATG3Q9NT62 314 aa22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms