RNA–Protein interactions for RNA: ENST00000485833.1

SMARCC1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 5

Gene SMARCC1, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-207ENST00000485833 ESF1Q9H501 851 aaKnown RBP9.91□□□□□ -0.82
SMARCC1-207ENST00000485833 ALG2Q9H553 416 aa9.91□□□□□ -0.82
SMARCC1-207ENST00000485833 NXF1Q9UBU9 619 aaKnown RBP9.91□□□□□ -0.82
SMARCC1-207ENST00000485833 POM121CA8CG34 1229 aa9.9□□□□□ -0.82
SMARCC1-207ENST00000485833 MYCP01106 439 aaPredicted RBP9.9□□□□□ -0.82
SMARCC1-207ENST00000485833 NFX1Q12986 1120 aaKnown RBP9.9□□□□□ -0.82
SMARCC1-207ENST00000485833 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.9□□□□□ -0.821e-8■■■□□ 17
SMARCC1-207ENST00000485833 TSGA10IPQ3SY00 556 aa9.89□□□□□ -0.83
SMARCC1-207ENST00000485833 TREML4Q6UXN2 200 aa9.89□□□□□ -0.83
SMARCC1-207ENST00000485833 NPAS3Q8IXF0 933 aa9.89□□□□□ -0.83
SMARCC1-207ENST00000485833 RNF217Q8TC41 542 aa9.89□□□□□ -0.83
SMARCC1-207ENST00000485833 FIGNL2A6NMB9 653 aa9.88□□□□□ -0.83
SMARCC1-207ENST00000485833 WFS1O76024 890 aa9.88□□□□□ -0.83
SMARCC1-207ENST00000485833 MAP7D1Q3KQU3 841 aa9.88□□□□□ -0.83
SMARCC1-207ENST00000485833 FOXD4L5Q5VV16 416 aaPredicted RBP9.88□□□□□ -0.83
SMARCC1-207ENST00000485833 FNBP4Q8N3X1 1017 aaPredicted RBP9.88□□□□□ -0.83
SMARCC1-207ENST00000485833 PLPP7Q8NBV4 271 aa9.88□□□□□ -0.83
SMARCC1-207ENST00000485833 A6NJR5 290 aa9.87□□□□□ -0.83
SMARCC1-207ENST00000485833 USP4Q13107 963 aa9.87□□□□□ -0.83
SMARCC1-207ENST00000485833 OXLD1Q5BKU9 147 aa9.87□□□□□ -0.83
SMARCC1-207ENST00000485833 A0A1W2PRU2 124 aa9.86□□□□□ -0.83
SMARCC1-207ENST00000485833 MEN1O00255 615 aa9.86□□□□□ -0.83
SMARCC1-207ENST00000485833 PIK3CDO00329 1044 aa9.86□□□□□ -0.83
SMARCC1-207ENST00000485833 LCE2AQ5TA79 106 aaPredicted RBP9.86□□□□□ -0.83
SMARCC1-207ENST00000485833 ADAMTS19Q8TE59 1207 aa9.86□□□□□ -0.83
SMARCC1-207ENST00000485833 SIRT1Q96EB6 747 aa9.86□□□□□ -0.83
SMARCC1-207ENST00000485833 ARHGEF10LQ9HCE6 1279 aa9.86□□□□□ -0.83
SMARCC1-207ENST00000485833 GNRH1P01148 92 aa9.85□□□□□ -0.83
SMARCC1-207ENST00000485833 RNF144AP50876 292 aaPredicted RBP9.85□□□□□ -0.83
SMARCC1-207ENST00000485833 SLC16A10Q8TF71 515 aa9.85□□□□□ -0.83
SMARCC1-207ENST00000485833 H3BM21 787 aa9.84□□□□□ -0.83
SMARCC1-207ENST00000485833 GPC1P35052 558 aa9.84□□□□□ -0.83
SMARCC1-207ENST00000485833 CLN3Q13286 438 aa9.84□□□□□ -0.83
SMARCC1-207ENST00000485833 NFATC2IPQ8NCF5 419 aa9.84□□□□□ -0.83
SMARCC1-207ENST00000485833 SKIP12755 728 aa9.83□□□□□ -0.84
SMARCC1-207ENST00000485833 VEGFBP49765 207 aa9.83□□□□□ -0.84
SMARCC1-207ENST00000485833 PTSQ03393 145 aa9.83□□□□□ -0.84
SMARCC1-207ENST00000485833 NLRP3Q96P20 1036 aa9.83□□□□□ -0.84
SMARCC1-207ENST00000485833 RAB6BQ9NRW1 208 aa9.83□□□□□ -0.84
SMARCC1-207ENST00000485833 HDGFL1Q5TGJ6 251 aa9.82□□□□□ -0.84
SMARCC1-207ENST00000485833 LYSMD3Q7Z3D4 306 aa9.82□□□□□ -0.84
SMARCC1-207ENST00000485833 LCE2CQ5TA81 110 aa9.81□□□□□ -0.84
SMARCC1-207ENST00000485833 PPFIA3O75145 1194 aa9.8□□□□□ -0.84
SMARCC1-207ENST00000485833 IL2RAP01589 272 aa9.8□□□□□ -0.84
SMARCC1-207ENST00000485833 EML3Q32P44 896 aa9.8□□□□□ -0.84
SMARCC1-207ENST00000485833 GLMNQ92990 594 aa9.8□□□□□ -0.84
SMARCC1-207ENST00000485833 UCN2Q96RP3 112 aa9.8□□□□□ -0.84
SMARCC1-207ENST00000485833 ESYT1Q9BSJ8 1104 aa9.8□□□□□ -0.84
SMARCC1-207ENST00000485833 SLC35F4A4IF30 521 aa9.79□□□□□ -0.84
SMARCC1-207ENST00000485833 LZTS3O60299 673 aaPredicted RBP9.79□□□□□ -0.84
SMARCC1-207ENST00000485833 ESCO1Q5FWF5 840 aa9.79□□□□□ -0.84
SMARCC1-207ENST00000485833 SLC27A3Q5K4L6 730 aa9.79□□□□□ -0.84
SMARCC1-207ENST00000485833 IRF7Q92985 503 aa9.79□□□□□ -0.84
SMARCC1-207ENST00000485833 CNKSR1Q969H4 720 aa9.79□□□□□ -0.84
SMARCC1-207ENST00000485833 USP17L5A8MUK1 530 aa9.78□□□□□ -0.84
SMARCC1-207ENST00000485833 NCOA4Q13772 614 aa9.78□□□□□ -0.84
SMARCC1-207ENST00000485833 PRICKLE2Q7Z3G6 844 aa9.78□□□□□ -0.84
SMARCC1-207ENST00000485833 CCDC155Q8N6L0 562 aa9.78□□□□□ -0.84
SMARCC1-207ENST00000485833 XAGE2Q96GT9 111 aa9.78□□□□□ -0.84
SMARCC1-207ENST00000485833 GRIP2Q9C0E4 1043 aa9.78□□□□□ -0.84
SMARCC1-207ENST00000485833 ETNK1Q9HBU6 452 aa9.78□□□□□ -0.84
SMARCC1-207ENST00000485833 NOD1Q9Y239 953 aa9.77□□□□□ -0.85
SMARCC1-207ENST00000485833 HRH3Q9Y5N1 445 aa9.77□□□□□ -0.85
SMARCC1-207ENST00000485833 ERBB4Q15303 1308 aa9.77□□□□□ -0.85
SMARCC1-207ENST00000485833 SENP3-EIF4A1A0A087X0R7 540 aa9.76□□□□□ -0.85
SMARCC1-207ENST00000485833 STAU1O95793 577 aaKnown RBP9.76□□□□□ -0.85
SMARCC1-207ENST00000485833 VSIG8P0DPA2 414 aa9.76□□□□□ -0.85
SMARCC1-207ENST00000485833 SPATA31C2B4DYI2 1134 aa9.75□□□□□ -0.85
SMARCC1-207ENST00000485833 ATP9BO43861 1147 aa9.75□□□□□ -0.85
SMARCC1-207ENST00000485833 RHOQP17081 205 aa9.75□□□□□ -0.85
SMARCC1-207ENST00000485833 SCNN1DP51172 638 aa9.75□□□□□ -0.85
SMARCC1-207ENST00000485833 CENPCQ03188 943 aa9.75□□□□□ -0.85
SMARCC1-207ENST00000485833 TBC1D9Q6ZT07 1266 aa9.75□□□□□ -0.85
SMARCC1-207ENST00000485833 PLEKHM2Q8IWE5 1019 aa9.75□□□□□ -0.85
SMARCC1-207ENST00000485833 DEPDC4Q8N2C3 294 aa9.75□□□□□ -0.85
SMARCC1-207ENST00000485833 USP17L3A6NCW0 530 aa9.74□□□□□ -0.85
SMARCC1-207ENST00000485833 USP17L4A6NCW7 530 aa9.74□□□□□ -0.85
SMARCC1-207ENST00000485833 WIPF1O43516 503 aa9.74□□□□□ -0.85
SMARCC1-207ENST00000485833 GDF10P55107 478 aa9.74□□□□□ -0.85
SMARCC1-207ENST00000485833 USP17L2Q6R6M4 530 aa9.74□□□□□ -0.85
SMARCC1-207ENST00000485833 USP17L1Q7RTZ2 530 aa9.74□□□□□ -0.85
SMARCC1-207ENST00000485833 FHDC1Q9C0D6 1143 aaPredicted RBP9.74□□□□□ -0.85
SMARCC1-207ENST00000485833 GTF3C3Q9Y5Q9 886 aa9.74□□□□□ -0.85
SMARCC1-207ENST00000485833 WASLO00401 505 aaPredicted RBP9.73□□□□□ -0.85
SMARCC1-207ENST00000485833 INHAP05111 366 aa9.73□□□□□ -0.85
SMARCC1-207ENST00000485833 ITGA6P23229 1130 aa9.73□□□□□ -0.85
SMARCC1-207ENST00000485833 GTF2IP78347 998 aa9.73□□□□□ -0.85
SMARCC1-207ENST00000485833 POU4F2Q12837 409 aa9.73□□□□□ -0.85
SMARCC1-207ENST00000485833 CALR3Q96L12 384 aaKnown RBP9.73□□□□□ -0.85
SMARCC1-207ENST00000485833 ZSCAN10Q96SZ4 725 aaPredicted RBP9.73□□□□□ -0.85
SMARCC1-207ENST00000485833 PCDHGA11Q9Y5H2 935 aa9.73□□□□□ -0.85
SMARCC1-207ENST00000485833 TLR1Q15399 786 aa9.72□□□□□ -0.85
SMARCC1-207ENST00000485833 NBPF10Q6P3W6 841 aaKnown RBP9.72□□□□□ -0.85
SMARCC1-207ENST00000485833 TAS1R3Q7RTX0 852 aa9.72□□□□□ -0.85
SMARCC1-207ENST00000485833 NBPF15Q8N660 670 aa9.72□□□□□ -0.85
SMARCC1-207ENST00000485833 GTF2E1P29083 439 aaPredicted RBP9.71□□□□□ -0.86
SMARCC1-207ENST00000485833 GMPRP36959 345 aa9.71□□□□□ -0.86
SMARCC1-207ENST00000485833 WDR44Q5JSH3 913 aa9.71□□□□□ -0.86
SMARCC1-207ENST00000485833 TRIM50Q86XT4 487 aa9.71□□□□□ -0.86
SMARCC1-207ENST00000485833 TMEM229AB2RXF0 380 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms