RNA–Protein interactions for RNA: ENST00000485407.1

NHLRC3-205, Transcript of NHL repeat containing 3, humanhuman

TSL 3

Gene NHLRC3, Length 623 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-205ENST00000485407 TSPY4P0CV99 314 aa8.25□□□□□ -1.09
NHLRC3-205ENST00000485407 TSPY10P0CW01 314 aa8.25□□□□□ -1.09
NHLRC3-205ENST00000485407 PRSS12P56730 875 aa8.25□□□□□ -1.09
NHLRC3-205ENST00000485407 VAC14Q08AM6 782 aa8.25□□□□□ -1.09
NHLRC3-205ENST00000485407 CDCA8Q53HL2 280 aa8.25□□□□□ -1.09
NHLRC3-205ENST00000485407 PACS2Q86VP3 889 aa8.25□□□□□ -1.09
NHLRC3-205ENST00000485407 CABLES1Q8TDN4 633 aa8.25□□□□□ -1.09
NHLRC3-205ENST00000485407 USP35Q9P2H5 1018 aa8.25□□□□□ -1.09
NHLRC3-205ENST00000485407 C9orf84Q5VXU9 1444 aa8.25□□□□□ -1.09
NHLRC3-205ENST00000485407 ARHGEF5Q12774 1597 aa8.25□□□□□ -1.09
NHLRC3-205ENST00000485407 ZNF644Q9H582 1327 aaPredicted RBP8.25□□□□□ -1.09
NHLRC3-205ENST00000485407 CAMSAP2Q08AD1 1489 aa8.25□□□□□ -1.09
NHLRC3-205ENST00000485407 CPS1P31327 1500 aa8.24□□□□□ -1.09
NHLRC3-205ENST00000485407 FGD6Q6ZV73 1430 aa8.24□□□□□ -1.09
NHLRC3-205ENST00000485407 RCCD1A6NED2 376 aa8.24□□□□□ -1.09
NHLRC3-205ENST00000485407 GJA5P36382 358 aa8.24□□□□□ -1.09
NHLRC3-205ENST00000485407 GJD4Q96KN9 370 aaPredicted RBP8.24□□□□□ -1.09
NHLRC3-205ENST00000485407 FAM198AQ9UFP1 575 aa8.24□□□□□ -1.09
NHLRC3-205ENST00000485407 ALKQ9UM73 1620 aa8.24□□□□□ -1.09
NHLRC3-205ENST00000485407 CCDC141Q6ZP82 1450 aa8.24□□□□□ -1.09
NHLRC3-205ENST00000485407 SPAG9O60271 1321 aaKnown RBP8.24□□□□□ -1.09
NHLRC3-205ENST00000485407 C3P01024 1663 aa8.24□□□□□ -1.09
NHLRC3-205ENST00000485407 REREQ9P2R6 1566 aa8.23□□□□□ -1.09
NHLRC3-205ENST00000485407 PLA2R1Q13018 1463 aa8.23□□□□□ -1.09
NHLRC3-205ENST00000485407 TCOF1Q13428 1488 aaKnown RBP8.23□□□□□ -1.09
NHLRC3-205ENST00000485407 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.22□□□□□ -1.09
NHLRC3-205ENST00000485407 KIDINS220Q9ULH0 1771 aa8.22□□□□□ -1.09
NHLRC3-205ENST00000485407 PTPN23Q9H3S7 1636 aa8.22□□□□□ -1.09
NHLRC3-205ENST00000485407 TFIP11Q9UBB9 837 aaKnown RBP8.22□□□□□ -1.09
NHLRC3-205ENST00000485407 AGLP35573 1532 aa8.21□□□□□ -1.1
NHLRC3-205ENST00000485407 ATP7AQ04656 1500 aa8.21□□□□□ -1.1
NHLRC3-205ENST00000485407 C3orf80F5H4A9 247 aa8.21□□□□□ -1.1
NHLRC3-205ENST00000485407 PRPF38BQ5VTL8 546 aaKnown RBP8.21□□□□□ -1.1
NHLRC3-205ENST00000485407 NYAP1Q6ZVC0 841 aa8.21□□□□□ -1.1
NHLRC3-205ENST00000485407 ZBTB3Q9H5J0 574 aa8.21□□□□□ -1.1
NHLRC3-205ENST00000485407 INO80Q9ULG1 1556 aaPredicted RBP8.21□□□□□ -1.1
NHLRC3-205ENST00000485407 DIP2CQ9Y2E4 1556 aa8.2□□□□□ -1.1
NHLRC3-205ENST00000485407 MAST1Q9Y2H9 1570 aa8.2□□□□□ -1.1
NHLRC3-205ENST00000485407 LRCH3Q96II8 777 aa8.2□□□□□ -1.1
NHLRC3-205ENST00000485407 ALG2Q9H553 416 aa8.2□□□□□ -1.1
NHLRC3-205ENST00000485407 WBP1LQ9NX94 342 aa8.2□□□□□ -1.1
NHLRC3-205ENST00000485407 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.2□□□□□ -1.1
NHLRC3-205ENST00000485407 SHANK2Q9UPX8 1470 aa8.19□□□□□ -1.1
NHLRC3-205ENST00000485407 ADGBQ8N7X0 1667 aa8.19□□□□□ -1.1
NHLRC3-205ENST00000485407 TMEM88BA6NKF7 163 aa8.19□□□□□ -1.1
NHLRC3-205ENST00000485407 NBPF26B4DH59 902 aa8.19□□□□□ -1.1
NHLRC3-205ENST00000485407 SMAPO00193 183 aa8.19□□□□□ -1.1
NHLRC3-205ENST00000485407 ATG7O95352 703 aa8.19□□□□□ -1.1
NHLRC3-205ENST00000485407 B4GALNT3Q6L9W6 998 aa8.19□□□□□ -1.1
NHLRC3-205ENST00000485407 TATDN2Q93075 761 aa8.19□□□□□ -1.1
NHLRC3-205ENST00000485407 HMX1Q9NP08 348 aaPredicted RBP8.19□□□□□ -1.1
NHLRC3-205ENST00000485407 TSR3Q9UJK0 312 aaKnown RBP8.19□□□□□ -1.1
NHLRC3-205ENST00000485407 NPATQ14207 1427 aa8.19□□□□□ -1.1
NHLRC3-205ENST00000485407 DNMT1P26358 1616 aaKnown RBP8.18□□□□□ -1.1
NHLRC3-205ENST00000485407 ABCA6Q8N139 1617 aa8.18□□□□□ -1.1
NHLRC3-205ENST00000485407 ITGBL1O95965 494 aaPredicted RBP8.18□□□□□ -1.1
NHLRC3-205ENST00000485407 CTDSPL2Q05D32 466 aa8.18□□□□□ -1.1
NHLRC3-205ENST00000485407 RDH13Q8NBN7 331 aa8.18□□□□□ -1.1
NHLRC3-205ENST00000485407 TSC1Q92574 1164 aa8.18□□□□□ -1.1
NHLRC3-205ENST00000485407 ESF1Q9H501 851 aaKnown RBP8.18□□□□□ -1.1
NHLRC3-205ENST00000485407 PNMA3Q9UL41 463 aa8.18□□□□□ -1.1
NHLRC3-205ENST00000485407 HPS5Q9UPZ3 1129 aa8.18□□□□□ -1.1
NHLRC3-205ENST00000485407 DHX29Q7Z478 1369 aaKnown RBP8.18□□□□□ -1.1
NHLRC3-205ENST00000485407 ABCC5O15440 1437 aa8.18□□□□□ -1.1
NHLRC3-205ENST00000485407 DAPK1P53355 1430 aa8.18□□□□□ -1.1
NHLRC3-205ENST00000485407 RRBP1Q9P2E9 1410 aaKnown RBP8.18□□□□□ -1.1
NHLRC3-205ENST00000485407 A2MP01023 1474 aa8.18□□□□□ -1.1
NHLRC3-205ENST00000485407 HMGB1P09429 215 aaKnown RBP8.17□□□□□ -1.1
NHLRC3-205ENST00000485407 SEMA3FQ13275 785 aa8.17□□□□□ -1.1
NHLRC3-205ENST00000485407 FAM50AQ14320 339 aaKnown RBP8.17□□□□□ -1.1
NHLRC3-205ENST00000485407 EYA1Q99502 592 aa8.17□□□□□ -1.1
NHLRC3-205ENST00000485407 TRIM34Q9BYJ4 488 aa8.17□□□□□ -1.1
NHLRC3-205ENST00000485407 PLXNC1O60486 1568 aa8.17□□□□□ -1.1
NHLRC3-205ENST00000485407 A0A0G2JS52 829 aa8.16□□□□□ -1.1
NHLRC3-205ENST00000485407 CROCC2H7BZ55 1655 aa8.16□□□□□ -1.1
NHLRC3-205ENST00000485407 KDM4AO75164 1064 aa8.16□□□□□ -1.1
NHLRC3-205ENST00000485407 DNAJB2P25686 324 aa8.16□□□□□ -1.1
NHLRC3-205ENST00000485407 NUDT18Q6ZVK8 323 aa8.16□□□□□ -1.1
NHLRC3-205ENST00000485407 SAMD7Q7Z3H4 446 aa8.16□□□□□ -1.1
NHLRC3-205ENST00000485407 UCN2Q96RP3 112 aa8.16□□□□□ -1.1
NHLRC3-205ENST00000485407 ANKRD30AQ9BXX3 1397 aa8.16□□□□□ -1.1
NHLRC3-205ENST00000485407 CNTLNQ9NXG0 1405 aa8.16□□□□□ -1.1
NHLRC3-205ENST00000485407 UNCXA6NJT0 531 aa8.15□□□□□ -1.1
NHLRC3-205ENST00000485407 FDX1P10109 184 aa8.15□□□□□ -1.1
NHLRC3-205ENST00000485407 SOX11P35716 441 aa8.15□□□□□ -1.1
NHLRC3-205ENST00000485407 PPARGC1BQ86YN6 1023 aaKnown RBP8.15□□□□□ -1.1
NHLRC3-205ENST00000485407 HELBQ8NG08 1087 aaPredicted RBP8.15□□□□□ -1.1
NHLRC3-205ENST00000485407 PRR7Q8TB68 274 aa8.15□□□□□ -1.1
NHLRC3-205ENST00000485407 GNEQ9Y223 722 aaKnown RBP8.15□□□□□ -1.1
NHLRC3-205ENST00000485407 DUOX2Q9NRD8 1548 aa8.14□□□□□ -1.11
NHLRC3-205ENST00000485407 ADGRL2O95490 1459 aa8.14□□□□□ -1.11
NHLRC3-205ENST00000485407 ROCK1Q13464 1354 aa8.14□□□□□ -1.11
NHLRC3-205ENST00000485407 GPR37L1O60883 481 aa8.14□□□□□ -1.11
NHLRC3-205ENST00000485407 LRRN4Q8WUT4 740 aa8.14□□□□□ -1.11
NHLRC3-205ENST00000485407 MAFBQ9Y5Q3 323 aaPredicted RBP8.14□□□□□ -1.11
NHLRC3-205ENST00000485407 FAM135AQ9P2D6 1515 aa8.13□□□□□ -1.11
NHLRC3-205ENST00000485407 CCER1Q8TC90 406 aaPredicted RBP8.13□□□□□ -1.11
NHLRC3-205ENST00000485407 ZNF142P52746 1687 aaPredicted RBP8.13□□□□□ -1.11
NHLRC3-205ENST00000485407 EIF2AK4Q9P2K8 1649 aaKnown RBP8.13□□□□□ -1.11
NHLRC3-205ENST00000485407 ERBINQ96RT1 1412 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms