RNA–Protein interactions for RNA: ENST00000483503.5

SND1-210, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 5

Gene SND1, Length 603 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-210ENST00000483503 DCTN1Q14203 1278 aa15.16■□□□□ 0.02
SND1-210ENST00000483503 CADPS2Q86UW7 1296 aa15.16■□□□□ 0.02
SND1-210ENST00000483503 TNNQ9UQP3 1299 aa15.16■□□□□ 0.02
SND1-210ENST00000483503 CRB1P82279 1406 aa15.16■□□□□ 0.02
SND1-210ENST00000483503 USP19O94966 1318 aa15.16■□□□□ 0.02
SND1-210ENST00000483503 GNAT3A8MTJ3 354 aa15.15■□□□□ 0.02
SND1-210ENST00000483503 IGHDP01880 384 aa15.15■□□□□ 0.02
SND1-210ENST00000483503 MCM10Q7L590 875 aa15.15■□□□□ 0.02
SND1-210ENST00000483503 SOS1Q07889 1333 aaPredicted RBP15.15■□□□□ 0.02
SND1-210ENST00000483503 TRPM3Q9HCF6 1732 aaPredicted RBP15.14■□□□□ 0.01
SND1-210ENST00000483503 GCP02774 474 aa15.14■□□□□ 0.01
SND1-210ENST00000483503 TMEM57Q8N5G2 664 aa15.14■□□□□ 0.01
SND1-210ENST00000483503 TSPYL6Q8N831 410 aa15.14■□□□□ 0.01
SND1-210ENST00000483503 C8orf58Q8NAV2 365 aa15.14■□□□□ 0.01
SND1-210ENST00000483503 MSH6P52701 1360 aa15.13■□□□□ 0.01
SND1-210ENST00000483503 MAP3K5Q99683 1374 aa15.13■□□□□ 0.01
SND1-210ENST00000483503 HDAC1Q13547 482 aaPredicted RBP15.13■□□□□ 0.01
SND1-210ENST00000483503 ARHGEF25Q86VW2 580 aa15.13■□□□□ 0.01
SND1-210ENST00000483503 LTV1Q96GA3 475 aaPredicted RBP15.13■□□□□ 0.01
SND1-210ENST00000483503 PCDHB15Q9Y5E8 787 aa15.13■□□□□ 0.01
SND1-210ENST00000483503 FAM161AQ3B820 660 aa15.12■□□□□ 0.01
SND1-210ENST00000483503 TSPYL4Q9UJ04 414 aa15.12■□□□□ 0.01
SND1-210ENST00000483503 ELL2O00472 640 aaPredicted RBP15.11■□□□□ 0.01
SND1-210ENST00000483503 CHMP4AQ9BY43 222 aa15.11■□□□□ 0.01
SND1-210ENST00000483503 ZBTB40Q9NUA8 1239 aa15.11■□□□□ 0.01
SND1-210ENST00000483503 ABCC4O15439 1325 aa15.11■□□□□ 0.01
SND1-210ENST00000483503 NPHP3Q7Z494 1330 aa15.11■□□□□ 0.01
SND1-210ENST00000483503 LRRC37A3O60309 1634 aa15.1■□□□□ 0.01
SND1-210ENST00000483503 LMOD2Q6P5Q4 547 aa15.1■□□□□ 0.01
SND1-210ENST00000483503 PTPRCP08575 1304 aa15.1■□□□□ 0.01
SND1-210ENST00000483503 STRCP1A6NGW2 1772 aa15.09■□□□□ 0.01
SND1-210ENST00000483503 RGS3P49796 1198 aa15.09■□□□□ 0.01
SND1-210ENST00000483503 AMOTQ4VCS5 1084 aa15.09■□□□□ 0.01
SND1-210ENST00000483503 PLEKHO1Q53GL0 409 aaPredicted RBP15.09■□□□□ 0.01
SND1-210ENST00000483503 ALS2Q96Q42 1657 aa15.09■□□□□ 0.01
SND1-210ENST00000483503 ZBTB7CA1YPR0 619 aa15.08■□□□□ 0
SND1-210ENST00000483503 XPCQ01831 940 aaPredicted RBP15.08■□□□□ 0
SND1-210ENST00000483503 TAF7Q15545 349 aaPredicted RBP15.08■□□□□ 0
SND1-210ENST00000483503 CERKQ8TCT0 537 aa15.08■□□□□ 0
SND1-210ENST00000483503 NCAPD2Q15021 1401 aa15.08■□□□□ 0
SND1-210ENST00000483503 HSPA2P54652 639 aa15.07■□□□□ 0
SND1-210ENST00000483503 NBPF6Q5VWK0 638 aa15.07■□□□□ 0
SND1-210ENST00000483503 NBPF4Q96M43 638 aa15.07■□□□□ 0
SND1-210ENST00000483503 ABCC6O95255 1503 aa15.07■□□□□ 0
SND1-210ENST00000483503 ERICH6Q7L0X2 663 aa15.06■□□□□ 0
SND1-210ENST00000483503 ANKRD24Q8TF21 1146 aa15.06■□□□□ 0
SND1-210ENST00000483503 PDZRN3Q9UPQ7 1066 aa15.06■□□□□ 0
SND1-210ENST00000483503 ZBTB7BO15156 539 aaPredicted RBP15.05■□□□□ -0
SND1-210ENST00000483503 AKAP4Q5JQC9 854 aa15.05■□□□□ -0
SND1-210ENST00000483503 INTS3Q68E01 1043 aaKnown RBP15.05■□□□□ -0
SND1-210ENST00000483503 IPO9Q96P70 1041 aaKnown RBP15.05■□□□□ -0
SND1-210ENST00000483503 STK31Q9BXU1 1019 aa15.05■□□□□ -0
SND1-210ENST00000483503 PLEKHG2Q9H7P9 1386 aa15.05■□□□□ -0
SND1-210ENST00000483503 TNS3Q68CZ2 1445 aa15.05■□□□□ -0
SND1-210ENST00000483503 CAMTA1Q9Y6Y1 1673 aa15.04■□□□□ -0
SND1-210ENST00000483503 OVOS2A0A0G2JMS6 1433 aa15.04■□□□□ -0
SND1-210ENST00000483503 CCDC30Q5VVM6 783 aa15.04■□□□□ -0
SND1-210ENST00000483503 SMC5Q8IY18 1101 aa15.04■□□□□ -0
SND1-210ENST00000483503 USHBP1Q8N6Y0 703 aa15.04■□□□□ -0
SND1-210ENST00000483503 IL17REQ8NFR9 667 aa15.04■□□□□ -0
SND1-210ENST00000483503 CEMIPQ8WUJ3 1361 aa15.03■□□□□ -0
SND1-210ENST00000483503 C1orf141Q5JVX7 400 aa15.03■□□□□ -0
SND1-210ENST00000483503 SKAP1Q86WV1 359 aa15.03■□□□□ -0
SND1-210ENST00000483503 GCC1Q96CN9 775 aa15.03■□□□□ -0
SND1-210ENST00000483503 DDRGK1Q96HY6 314 aa15.03■□□□□ -0
SND1-210ENST00000483503 C8orf34Q49A92 452 aa15.02■□□□□ -0
SND1-210ENST00000483503 ZNF530Q6P9A1 599 aaPredicted RBP15.02■□□□□ -0
SND1-210ENST00000483503 LMO7Q8WWI1 1683 aa15.02□□□□□ -0.01
SND1-210ENST00000483503 STRCQ7RTU9 1775 aa15.01□□□□□ -0.01
SND1-210ENST00000483503 SPATA31A3Q5VYP0 1347 aa15.01□□□□□ -0.01
SND1-210ENST00000483503 SLC4A2P04920 1241 aa15.01□□□□□ -0.01
SND1-210ENST00000483503 HOXB7P09629 217 aa15.01□□□□□ -0.01
SND1-210ENST00000483503 MIS18AQ9NYP9 233 aa15.01□□□□□ -0.01
SND1-210ENST00000483503 CACNA1FO60840 1977 aa15.01□□□□□ -0.01
SND1-210ENST00000483503 MED1Q15648 1581 aaPredicted RBP15.01□□□□□ -0.01
SND1-210ENST00000483503 PXDNQ92626 1479 aa15.01□□□□□ -0.01
SND1-210ENST00000483503 CCT4P50991 539 aaKnown RBP15□□□□□ -0.01
SND1-210ENST00000483503 TEFQ10587 303 aa15□□□□□ -0.01
SND1-210ENST00000483503 KRT24Q2M2I5 525 aa15□□□□□ -0.01
SND1-210ENST00000483503 LRRC59Q96AG4 307 aaKnown RBP15□□□□□ -0.01
SND1-210ENST00000483503 ERBB3P21860 1342 aa14.99□□□□□ -0.01
SND1-210ENST00000483503 NPM2Q86SE8 214 aaKnown RBP14.99□□□□□ -0.01
SND1-210ENST00000483503 ZBTB47Q9UFB7 747 aaPredicted RBP14.99□□□□□ -0.01
SND1-210ENST00000483503 NOP58Q9Y2X3 529 aaKnown RBP14.99□□□□□ -0.01
SND1-210ENST00000483503 FAM208AQ9UK61 1670 aaKnown RBP14.99□□□□□ -0.01
SND1-210ENST00000483503 XIRP1Q702N8 1843 aaKnown RBP14.99□□□□□ -0.01
SND1-210ENST00000483503 CPDO75976 1380 aa14.98□□□□□ -0.01
SND1-210ENST00000483503 RGPD2P0DJD1 1756 aa14.98□□□□□ -0.01
SND1-210ENST00000483503 MSH5O43196 834 aa14.98□□□□□ -0.01
SND1-210ENST00000483503 ZC3H6P61129 1189 aaKnown RBP14.98□□□□□ -0.01
SND1-210ENST00000483503 NUCB1Q02818 461 aa14.98□□□□□ -0.01
SND1-210ENST00000483503 RAPGEF4Q8WZA2 1011 aa14.98□□□□□ -0.01
SND1-210ENST00000483503 VIRMAQ69YN4 1812 aaKnown RBP14.98□□□□□ -0.01
SND1-210ENST00000483503 RGS12O14924 1447 aa14.98□□□□□ -0.01
SND1-210ENST00000483503 RNMTO43148 476 aaKnown RBP14.97□□□□□ -0.01
SND1-210ENST00000483503 TATP17735 454 aaPredicted RBP14.97□□□□□ -0.01
SND1-210ENST00000483503 BRINP3Q76B58 766 aa14.97□□□□□ -0.01
SND1-210ENST00000483503 RPAP2Q8IXW5 612 aaPredicted RBP14.97□□□□□ -0.01
SND1-210ENST00000483503 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.97□□□□□ -0.012e-11■■□□□ 12.9
SND1-210ENST00000483503 AXIN2Q9Y2T1 843 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms