RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 PPP1R26Q5T8A7 1209 aaPredicted RBP10.7□□□□□ -0.7
SF3B1-210ENST00000482158 CCDC116Q8IYX3 515 aa10.7□□□□□ -0.7
SF3B1-210ENST00000482158 ZNF784Q8NCA9 323 aaPredicted RBP10.7□□□□□ -0.7
SF3B1-210ENST00000482158 SNIP1Q8TAD8 396 aaKnown RBP10.7□□□□□ -0.7
SF3B1-210ENST00000482158 USTQ9Y2C2 406 aa10.7□□□□□ -0.7
SF3B1-210ENST00000482158 LILRA1O75019 489 aa10.69□□□□□ -0.7
SF3B1-210ENST00000482158 TMEM164Q5U3C3 297 aa10.69□□□□□ -0.7
SF3B1-210ENST00000482158 LARP1Q6PKG0 1096 aaKnown RBP10.69□□□□□ -0.7
SF3B1-210ENST00000482158 TRIM50Q86XT4 487 aa10.69□□□□□ -0.7
SF3B1-210ENST00000482158 DNAAF2Q9NVR5 837 aaKnown RBP10.69□□□□□ -0.7
SF3B1-210ENST00000482158 J3QL48 77 aa10.68□□□□□ -0.7
SF3B1-210ENST00000482158 TNFRSF10AO00220 468 aa10.68□□□□□ -0.7
SF3B1-210ENST00000482158 DHX9Q08211 1270 aaKnown RBP10.68□□□□□ -0.7
SF3B1-210ENST00000482158 LARGE2Q8N3Y3 721 aa10.68□□□□□ -0.7
SF3B1-210ENST00000482158 ZNF594Q96JF6 807 aaPredicted RBP10.68□□□□□ -0.7
SF3B1-210ENST00000482158 OSBPL3Q9H4L5 887 aa10.68□□□□□ -0.7
SF3B1-210ENST00000482158 TOR4AQ9NXH8 423 aa10.68□□□□□ -0.7
SF3B1-210ENST00000482158 ATP1A2P50993 1020 aa10.67□□□□□ -0.7
SF3B1-210ENST00000482158 DPYDQ12882 1025 aa10.67□□□□□ -0.7
SF3B1-210ENST00000482158 NNTQ13423 1086 aa10.67□□□□□ -0.7
SF3B1-210ENST00000482158 CC2D2BQ6DHV5 1058 aa10.67□□□□□ -0.7
SF3B1-210ENST00000482158 ANKMY2Q8IV38 441 aa10.67□□□□□ -0.7
SF3B1-210ENST00000482158 SIX5Q8N196 739 aa10.67□□□□□ -0.7
SF3B1-210ENST00000482158 SIRT1Q96EB6 747 aa10.67□□□□□ -0.7
SF3B1-210ENST00000482158 CYLDQ9NQC7 956 aa10.67□□□□□ -0.7
SF3B1-210ENST00000482158 ADD1P35611 737 aaKnown RBP10.66□□□□□ -0.7
SF3B1-210ENST00000482158 FAM69CQ0P6D2 419 aa10.66□□□□□ -0.7
SF3B1-210ENST00000482158 KLF16Q9BXK1 252 aaPredicted RBP10.66□□□□□ -0.7
SF3B1-210ENST00000482158 MYCP01106 439 aaPredicted RBP10.65□□□□□ -0.7
SF3B1-210ENST00000482158 CCDC102BQ68D86 513 aa10.65□□□□□ -0.7
SF3B1-210ENST00000482158 SLAIN2Q9P270 581 aa10.65□□□□□ -0.7
SF3B1-210ENST00000482158 SMPD1P17405 629 aa10.64□□□□□ -0.71
SF3B1-210ENST00000482158 PRR20EP86478 221 aa10.64□□□□□ -0.71
SF3B1-210ENST00000482158 PRR20CP86479 221 aa10.64□□□□□ -0.71
SF3B1-210ENST00000482158 PRR20DP86480 221 aa10.64□□□□□ -0.71
SF3B1-210ENST00000482158 PRR20BP86481 221 aa10.64□□□□□ -0.71
SF3B1-210ENST00000482158 PRR20AP86496 221 aa10.64□□□□□ -0.71
SF3B1-210ENST00000482158 WASF2Q9Y6W5 498 aa10.64□□□□□ -0.71
SF3B1-210ENST00000482158 STAU1O95793 577 aaKnown RBP10.63□□□□□ -0.71
SF3B1-210ENST00000482158 MYT1Q01538 1121 aa10.63□□□□□ -0.71
SF3B1-210ENST00000482158 CYP4X1Q8N118 509 aa10.63□□□□□ -0.71
SF3B1-210ENST00000482158 TPCN2Q8NHX9 752 aa10.63□□□□□ -0.71
SF3B1-210ENST00000482158 FAM200AQ8TCP9 573 aa10.63□□□□□ -0.71
SF3B1-210ENST00000482158 EMILIN1Q9Y6C2 1016 aa10.63□□□□□ -0.71
SF3B1-210ENST00000482158 TTC24A2A3L6 582 aaPredicted RBP10.62□□□□□ -0.71
SF3B1-210ENST00000482158 PDE4CQ08493 712 aa10.62□□□□□ -0.71
SF3B1-210ENST00000482158 SFI1A8K8P3 1242 aa10.61□□□□□ -0.71
SF3B1-210ENST00000482158 TMEM229AB2RXF0 380 aa10.61□□□□□ -0.71
SF3B1-210ENST00000482158 SCNN1DP51172 638 aa10.61□□□□□ -0.71
SF3B1-210ENST00000482158 TRIM26Q12899 539 aaPredicted RBP10.61□□□□□ -0.71
SF3B1-210ENST00000482158 KDF1Q8NAX2 398 aaPredicted RBP10.61□□□□□ -0.71
SF3B1-210ENST00000482158 ITPKCQ96DU7 683 aa10.61□□□□□ -0.71
SF3B1-210ENST00000482158 RGS20O76081 388 aa10.6□□□□□ -0.71
SF3B1-210ENST00000482158 PGPEP1Q9NXJ5 209 aa10.6□□□□□ -0.71
SF3B1-210ENST00000482158 SEC13P55735 322 aa10.59□□□□□ -0.71
SF3B1-210ENST00000482158 PSME1Q06323 249 aa10.59□□□□□ -0.71
SF3B1-210ENST00000482158 CBLBQ13191 982 aa10.59□□□□□ -0.71
SF3B1-210ENST00000482158 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.59□□□□□ -0.71
SF3B1-210ENST00000482158 TIMP2P16035 220 aa10.58□□□□□ -0.72
SF3B1-210ENST00000482158 HPS1Q92902 700 aa10.58□□□□□ -0.72
SF3B1-210ENST00000482158 ZFAND3Q9H8U3 227 aa10.58□□□□□ -0.72
SF3B1-210ENST00000482158 ZIC2O95409 532 aaPredicted RBP10.57□□□□□ -0.72
SF3B1-210ENST00000482158 PHLDB3Q6NSJ2 640 aa10.57□□□□□ -0.72
SF3B1-210ENST00000482158 Q6ZVU0 165 aa10.57□□□□□ -0.72
SF3B1-210ENST00000482158 CLP1Q92989 425 aaKnown RBP10.57□□□□□ -0.72
SF3B1-210ENST00000482158 ETNK1Q9HBU6 452 aa10.57□□□□□ -0.72
SF3B1-210ENST00000482158 ZNF358Q9NW07 568 aa10.57□□□□□ -0.72
SF3B1-210ENST00000482158 WASLO00401 505 aaPredicted RBP10.56□□□□□ -0.72
SF3B1-210ENST00000482158 GDF10P55107 478 aa10.56□□□□□ -0.72
SF3B1-210ENST00000482158 WDR4P57081 412 aaKnown RBP10.56□□□□□ -0.72
SF3B1-210ENST00000482158 SWI5Q1ZZU3 235 aa10.56□□□□□ -0.72
SF3B1-210ENST00000482158 CYP2U1Q7Z449 544 aa10.56□□□□□ -0.72
SF3B1-210ENST00000482158 ESF1Q9H501 851 aaKnown RBP10.56□□□□□ -0.72
SF3B1-210ENST00000482158 M0R2N6 131 aa10.55□□□□□ -0.72
SF3B1-210ENST00000482158 BRD1O95696 1058 aa10.55□□□□□ -0.72
SF3B1-210ENST00000482158 GNRH1P01148 92 aa10.55□□□□□ -0.72
SF3B1-210ENST00000482158 ADH1AP07327 375 aa10.55□□□□□ -0.72
SF3B1-210ENST00000482158 TRIM52Q96A61 297 aa10.55□□□□□ -0.72
SF3B1-210ENST00000482158 LGR5O75473 907 aa10.54□□□□□ -0.72
SF3B1-210ENST00000482158 INHAP05111 366 aa10.54□□□□□ -0.72
SF3B1-210ENST00000482158 TSEN2Q8NCE0 465 aaKnown RBP10.54□□□□□ -0.72
SF3B1-210ENST00000482158 SSFA2P28290 1259 aa10.53□□□□□ -0.72
SF3B1-210ENST00000482158 AEBP1Q8IUX7 1158 aa10.53□□□□□ -0.72
SF3B1-210ENST00000482158 KCTD17Q8N5Z5 321 aa10.53□□□□□ -0.72
SF3B1-210ENST00000482158 RAB6BQ9NRW1 208 aa10.53□□□□□ -0.72
SF3B1-210ENST00000482158 PDZRN3Q9UPQ7 1066 aa10.53□□□□□ -0.72
SF3B1-210ENST00000482158 IL2RAP01589 272 aa10.52□□□□□ -0.73
SF3B1-210ENST00000482158 EPHA4P54764 986 aa10.52□□□□□ -0.73
SF3B1-210ENST00000482158 OCLNQ16625 522 aa10.52□□□□□ -0.73
SF3B1-210ENST00000482158 XAGE2Q96GT9 111 aa10.52□□□□□ -0.73
SF3B1-210ENST00000482158 AGBL1Q96MI9 1066 aa10.52□□□□□ -0.73
SF3B1-210ENST00000482158 SLC4A9Q96Q91 983 aa10.52□□□□□ -0.73
SF3B1-210ENST00000482158 ARHGEF10LQ9HCE6 1279 aa10.52□□□□□ -0.73
SF3B1-210ENST00000482158 RBM19Q9Y4C8 960 aaKnown RBP10.52□□□□□ -0.73
SF3B1-210ENST00000482158 HRH3Q9Y5N1 445 aa10.52□□□□□ -0.73
SF3B1-210ENST00000482158 A0A1W2PRU2 124 aa10.5□□□□□ -0.73
SF3B1-210ENST00000482158 TNS4Q8IZW8 715 aa10.5□□□□□ -0.73
SF3B1-210ENST00000482158 PRIMPOLQ96LW4 560 aa10.5□□□□□ -0.73
SF3B1-210ENST00000482158 SERTAD1Q9UHV2 236 aa10.5□□□□□ -0.73
SF3B1-210ENST00000482158 PRMT3O60678 531 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms