RNA–Protein interactions for RNA: ENST00000482014.1

CHRD-213, Transcript of chordin, humanhuman

TSL 4

Gene CHRD, Length 560 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-213ENST00000482014 PRIM1P49642 420 aaKnown RBP22.62■■□□□ 1.21
CHRD-213ENST00000482014 MSL1Q68DK7 614 aa22.62■■□□□ 1.21
CHRD-213ENST00000482014 FLAD1Q8NFF5 587 aa22.62■■□□□ 1.21
CHRD-213ENST00000482014 TOMM70O94826 608 aa22.6■■□□□ 1.21
CHRD-213ENST00000482014 ROCK2O75116 1388 aaKnown RBP22.59■■□□□ 1.21
CHRD-213ENST00000482014 KTN1Q86UP2 1357 aaKnown RBP22.59■■□□□ 1.21
CHRD-213ENST00000482014 USP31Q70CQ4 1352 aa22.58■■□□□ 1.21
CHRD-213ENST00000482014 LY75O60449 1722 aa22.57■■□□□ 1.2
CHRD-213ENST00000482014 IGSF1Q8N6C5 1336 aa22.56■■□□□ 1.2
CHRD-213ENST00000482014 NSD2O96028 1365 aa22.55■■□□□ 1.2
CHRD-213ENST00000482014 USP47Q96K76 1375 aa22.55■■□□□ 1.2
CHRD-213ENST00000482014 COL13A1Q5TAT6 717 aaPredicted RBP22.55■■□□□ 1.2
CHRD-213ENST00000482014 PRELPP51888 382 aa22.54■■□□□ 1.2
CHRD-213ENST00000482014 CAPN15O75808 1086 aa22.53■■□□□ 1.2
CHRD-213ENST00000482014 TONSLQ96HA7 1378 aa22.51■■□□□ 1.19
CHRD-213ENST00000482014 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.51■■□□□ 1.19
CHRD-213ENST00000482014 TNS4Q8IZW8 715 aa22.51■■□□□ 1.19
CHRD-213ENST00000482014 JMYQ8N9B5 988 aa22.51■■□□□ 1.19
CHRD-213ENST00000482014 KLRG1Q96E93 195 aa22.51■■□□□ 1.19
CHRD-213ENST00000482014 ZCRB1Q8TBF4 217 aaKnown RBP22.49■■□□□ 1.19
CHRD-213ENST00000482014 USP54Q70EL1 1684 aa22.47■■□□□ 1.19
CHRD-213ENST00000482014 NME9Q86XW9 330 aa22.47■■□□□ 1.19
CHRD-213ENST00000482014 RBM46Q8TBY0 533 aaKnown RBP22.47■■□□□ 1.19
CHRD-213ENST00000482014 IP6K1Q92551 441 aa22.47■■□□□ 1.19
CHRD-213ENST00000482014 WWC3Q9ULE0 1092 aa22.47■■□□□ 1.19
CHRD-213ENST00000482014 DOT1LQ8TEK3 1739 aa22.47■■□□□ 1.19
CHRD-213ENST00000482014 LTN1O94822 1766 aa22.47■■□□□ 1.19
CHRD-213ENST00000482014 CARD11Q9BXL7 1154 aa22.46■■□□□ 1.19
CHRD-213ENST00000482014 SBNO2Q9Y2G9 1366 aa22.45■■□□□ 1.18
CHRD-213ENST00000482014 C16orf71Q8IYS4 520 aaPredicted RBP22.44■■□□□ 1.18
CHRD-213ENST00000482014 CICQ96RK0 1608 aaPredicted RBP22.44■■□□□ 1.18
CHRD-213ENST00000482014 FAM208AQ9UK61 1670 aaKnown RBP22.44■■□□□ 1.18
CHRD-213ENST00000482014 NSD3Q9BZ95 1437 aa22.43■■□□□ 1.18
CHRD-213ENST00000482014 FSTL1Q12841 308 aa22.43■■□□□ 1.18
CHRD-213ENST00000482014 LTV1Q96GA3 475 aaPredicted RBP22.43■■□□□ 1.18
CHRD-213ENST00000482014 AK7Q96M32 723 aa22.43■■□□□ 1.18
CHRD-213ENST00000482014 MON2Q7Z3U7 1717 aa22.43■■□□□ 1.18
CHRD-213ENST00000482014 WDR90Q96KV7 1748 aa22.42■■□□□ 1.18
CHRD-213ENST00000482014 C5P01031 1676 aa22.41■■□□□ 1.18
CHRD-213ENST00000482014 CGNL1Q0VF96 1302 aa22.4■■□□□ 1.18
CHRD-213ENST00000482014 NMRK2Q9NPI5 230 aa22.4■■□□□ 1.18
CHRD-213ENST00000482014 HDGFL2Q7Z4V5 671 aaPredicted RBP22.39■■□□□ 1.17
CHRD-213ENST00000482014 PALLDQ8WX93 1383 aa22.38■■□□□ 1.17
CHRD-213ENST00000482014 SMARCC1Q92922 1105 aaPredicted RBP22.37■■□□□ 1.17
CHRD-213ENST00000482014 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.36■■□□□ 1.17
CHRD-213ENST00000482014 SSFA2P28290 1259 aa22.36■■□□□ 1.17
CHRD-213ENST00000482014 EDC4Q6P2E9 1401 aaKnown RBP22.36■■□□□ 1.17
CHRD-213ENST00000482014 PHF14O94880 888 aa22.35■■□□□ 1.17
CHRD-213ENST00000482014 TGFB2P61812 414 aa22.35■■□□□ 1.17
CHRD-213ENST00000482014 HTRA3P83110 453 aa22.35■■□□□ 1.17
CHRD-213ENST00000482014 MEGF6O75095 1541 aa22.35■■□□□ 1.17
CHRD-213ENST00000482014 BCS1LQ9Y276 419 aa22.34■■□□□ 1.17
CHRD-213ENST00000482014 PLEKHG2Q9H7P9 1386 aa22.34■■□□□ 1.17
CHRD-213ENST00000482014 HOXC9P31274 260 aa22.33■■□□□ 1.17
CHRD-213ENST00000482014 ARHGAP27Q6ZUM4 889 aa22.33■■□□□ 1.17
CHRD-213ENST00000482014 C4BP0C0L5 1744 aa22.33■■□□□ 1.17
CHRD-213ENST00000482014 CD163L1Q9NR16 1453 aa22.33■■□□□ 1.16
CHRD-213ENST00000482014 AMPHP49418 695 aa22.32■■□□□ 1.16
CHRD-213ENST00000482014 TMC1Q8TDI8 760 aa22.32■■□□□ 1.16
CHRD-213ENST00000482014 RAPGEF4Q8WZA2 1011 aa22.32■■□□□ 1.16
CHRD-213ENST00000482014 TAF1LQ8IZX4 1826 aa22.31■■□□□ 1.16
CHRD-213ENST00000482014 MPRIPQ6WCQ1 1025 aa22.31■■□□□ 1.16
CHRD-213ENST00000482014 AMIGO3Q86WK7 504 aa22.31■■□□□ 1.16
CHRD-213ENST00000482014 PUS7Q96PZ0 661 aaKnown RBP22.31■■□□□ 1.16
CHRD-213ENST00000482014 TERF2IPQ9NYB0 399 aa22.31■■□□□ 1.16
CHRD-213ENST00000482014 KDM2BQ8NHM5 1336 aa22.31■■□□□ 1.16
CHRD-213ENST00000482014 PXDNLA1KZ92 1463 aa22.3■■□□□ 1.16
CHRD-213ENST00000482014 MAP3K19Q56UN5 1328 aa22.3■■□□□ 1.16
CHRD-213ENST00000482014 PCDH11XQ9BZA7 1347 aa22.3■■□□□ 1.16
CHRD-213ENST00000482014 PCDH11YQ9BZA8 1340 aa22.3■■□□□ 1.16
CHRD-213ENST00000482014 TESK2Q96S53 571 aa22.29■■□□□ 1.16
CHRD-213ENST00000482014 ST20-MTHFSA0A0A6YYL1 179 aa22.28■■□□□ 1.16
CHRD-213ENST00000482014 TATP17735 454 aaPredicted RBP22.28■■□□□ 1.16
CHRD-213ENST00000482014 MMP10P09238 476 aa22.27■■□□□ 1.16
CHRD-213ENST00000482014 C9orf131Q5VYM1 1079 aa22.27■■□□□ 1.16
CHRD-213ENST00000482014 C10orf71Q711Q0 1435 aa22.27■■□□□ 1.16
CHRD-213ENST00000482014 COG3Q96JB2 828 aa22.27■■□□□ 1.16
CHRD-213ENST00000482014 UBR3Q6ZT12 1888 aa22.26■■□□□ 1.15
CHRD-213ENST00000482014 FCHSD2O94868 740 aa22.26■■□□□ 1.15
CHRD-213ENST00000482014 SLC34A2O95436 690 aa22.26■■□□□ 1.15
CHRD-213ENST00000482014 SMC1BQ8NDV3 1235 aa22.26■■□□□ 1.15
CHRD-213ENST00000482014 SLC12A5Q9H2X9 1139 aa22.26■■□□□ 1.15
CHRD-213ENST00000482014 PCNTO95613 3336 aa22.26■■□□□ 1.15
CHRD-213ENST00000482014 TOGARAM1Q9Y4F4 1720 aa22.26■■□□□ 1.15
CHRD-213ENST00000482014 A0A0G2JLW4 131 aa22.25■■□□□ 1.15
CHRD-213ENST00000482014 HSPA1AP0DMV8 641 aaKnown RBP22.25■■□□□ 1.15
CHRD-213ENST00000482014 HSPA1BP0DMV9 641 aaKnown RBP22.25■■□□□ 1.15
CHRD-213ENST00000482014 NBPF6Q5VWK0 638 aa22.25■■□□□ 1.15
CHRD-213ENST00000482014 SMIM5Q71RC9 77 aa22.25■■□□□ 1.15
CHRD-213ENST00000482014 NBPF4Q96M43 638 aa22.25■■□□□ 1.15
CHRD-213ENST00000482014 CLSPNQ9HAW4 1339 aa22.25■■□□□ 1.15
CHRD-213ENST00000482014 RTL1A6NKG5 1358 aa22.25■■□□□ 1.15
CHRD-213ENST00000482014 TIMELESSQ9UNS1 1208 aa22.24■■□□□ 1.15
CHRD-213ENST00000482014 A0A1W2PP64 1363 aa22.24■■□□□ 1.15
CHRD-213ENST00000482014 SLC24A1O60721 1099 aa22.23■■□□□ 1.15
CHRD-213ENST00000482014 SMG6Q86US8 1419 aaKnown RBP22.23■■□□□ 1.15
CHRD-213ENST00000482014 LOC102724428A0A0B4J2F2 783 aa22.22■■□□□ 1.15
CHRD-213ENST00000482014 GNPATO15228 680 aa22.22■■□□□ 1.15
CHRD-213ENST00000482014 SIK1P57059 783 aa22.22■■□□□ 1.15
CHRD-213ENST00000482014 NLGN1Q8N2Q7 840 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms