RNA–Protein interactions for RNA: ENST00000480615.1

SNRNP200-204, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 5

Gene SNRNP200, Length 1,646 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-204ENST00000480615 CDCA7Q9BWT1 371 aaPredicted RBP18.02■□□□□ 0.48
SNRNP200-204ENST00000480615 EXOC5O00471 708 aa18.01■□□□□ 0.47
SNRNP200-204ENST00000480615 KRT27Q7Z3Y8 459 aa18.01■□□□□ 0.47
SNRNP200-204ENST00000480615 NCAPD2Q15021 1401 aa18.01■□□□□ 0.47
SNRNP200-204ENST00000480615 DDX54Q8TDD1 881 aaKnown RBP18.01■□□□□ 0.47
SNRNP200-204ENST00000480615 OVOS2A0A0G2JMS6 1433 aa18■□□□□ 0.47
SNRNP200-204ENST00000480615 TNS2Q63HR2 1409 aa17.99■□□□□ 0.47
SNRNP200-204ENST00000480615 ZCRB1Q8TBF4 217 aaKnown RBP17.99■□□□□ 0.47
SNRNP200-204ENST00000480615 MRS2Q9HD23 443 aa17.98■□□□□ 0.47
SNRNP200-204ENST00000480615 SHANK3Q9BYB0 1731 aa17.98■□□□□ 0.47
SNRNP200-204ENST00000480615 KDRP35968 1356 aa17.98■□□□□ 0.47
SNRNP200-204ENST00000480615 WDR43Q15061 677 aaKnown RBP eCLIP17.97■□□□□ 0.47
SNRNP200-204ENST00000480615 MIER1Q8N108 512 aa17.97■□□□□ 0.47
SNRNP200-204ENST00000480615 MARCH10Q8NA82 808 aaPredicted RBP17.97■□□□□ 0.47
SNRNP200-204ENST00000480615 PKD1L3Q7Z443 1732 aa17.96■□□□□ 0.47
SNRNP200-204ENST00000480615 PRKAR2BP31323 418 aa17.96■□□□□ 0.47
SNRNP200-204ENST00000480615 KAT6BQ8WYB5 2073 aa17.95■□□□□ 0.46
SNRNP200-204ENST00000480615 RSPH6AQ9H0K4 717 aa17.94■□□□□ 0.46
SNRNP200-204ENST00000480615 SPG7Q9UQ90 795 aa17.94■□□□□ 0.46
SNRNP200-204ENST00000480615 PCDH11XQ9BZA7 1347 aa17.93■□□□□ 0.46
SNRNP200-204ENST00000480615 PCDH11YQ9BZA8 1340 aa17.93■□□□□ 0.46
SNRNP200-204ENST00000480615 PLEKHO1Q53GL0 409 aaPredicted RBP17.93■□□□□ 0.46
SNRNP200-204ENST00000480615 CYP27B1O15528 508 aa17.92■□□□□ 0.46
SNRNP200-204ENST00000480615 ZNF530Q6P9A1 599 aaPredicted RBP17.92■□□□□ 0.46
SNRNP200-204ENST00000480615 PHACTR3Q96KR7 559 aa17.92■□□□□ 0.46
SNRNP200-204ENST00000480615 ADAMTS8Q9UP79 889 aa17.92■□□□□ 0.46
SNRNP200-204ENST00000480615 FCHSD2O94868 740 aa17.91■□□□□ 0.46
SNRNP200-204ENST00000480615 CCDC146Q8IYE0 955 aa17.91■□□□□ 0.46
SNRNP200-204ENST00000480615 ACSBG1Q96GR2 724 aa17.9■□□□□ 0.46
SNRNP200-204ENST00000480615 MTHFSDQ2M296 383 aaKnown RBP17.9■□□□□ 0.46
SNRNP200-204ENST00000480615 AMOTQ4VCS5 1084 aa17.9■□□□□ 0.46
SNRNP200-204ENST00000480615 FAM196AQ6ZSG2 479 aa17.9■□□□□ 0.46
SNRNP200-204ENST00000480615 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.89■□□□□ 0.452e-8■□□□□ 11
SNRNP200-204ENST00000480615 TRIM37O94972 964 aa17.88■□□□□ 0.45
SNRNP200-204ENST00000480615 PHKG2P15735 406 aa17.88■□□□□ 0.45
SNRNP200-204ENST00000480615 C1orf141Q5JVX7 400 aa17.88■□□□□ 0.45
SNRNP200-204ENST00000480615 IFNL2Q8IZJ0 200 aa17.88■□□□□ 0.45
SNRNP200-204ENST00000480615 SBF2Q86WG5 1849 aa17.88■□□□□ 0.45
SNRNP200-204ENST00000480615 DOT1LQ8TEK3 1739 aa17.88■□□□□ 0.45
SNRNP200-204ENST00000480615 SENP3-EIF4A1A0A087X0R7 540 aa17.87■□□□□ 0.45
SNRNP200-204ENST00000480615 NEFMP07197 916 aa17.87■□□□□ 0.45
SNRNP200-204ENST00000480615 FAM9BQ8IZU0 186 aa17.87■□□□□ 0.45
SNRNP200-204ENST00000480615 SYTL4Q96C24 671 aaPredicted RBP17.87■□□□□ 0.45
SNRNP200-204ENST00000480615 MAPK8IP3Q9UPT6 1336 aa17.87■□□□□ 0.45
SNRNP200-204ENST00000480615 PNISRQ8TF01 805 aaKnown RBP17.87■□□□□ 0.45
SNRNP200-204ENST00000480615 KCNQ2O43526 872 aa17.86■□□□□ 0.45
SNRNP200-204ENST00000480615 MPRIPQ6WCQ1 1025 aa17.86■□□□□ 0.45
SNRNP200-204ENST00000480615 PTF1AQ7RTS3 328 aa17.86■□□□□ 0.45
SNRNP200-204ENST00000480615 PLEKHF1Q96S99 279 aa17.86■□□□□ 0.45
SNRNP200-204ENST00000480615 TOGARAM1Q9Y4F4 1720 aa17.85■□□□□ 0.45
SNRNP200-204ENST00000480615 PNNQ9H307 717 aaKnown RBP17.85■□□□□ 0.45
SNRNP200-204ENST00000480615 VIRMAQ69YN4 1812 aaKnown RBP17.84■□□□□ 0.45
SNRNP200-204ENST00000480615 CCER2I3L3R5 266 aa17.84■□□□□ 0.45
SNRNP200-204ENST00000480615 PRIM1P49642 420 aaKnown RBP17.83■□□□□ 0.45
SNRNP200-204ENST00000480615 AKAP4Q5JQC9 854 aa17.83■□□□□ 0.45
SNRNP200-204ENST00000480615 GAS2L2Q8NHY3 880 aa17.83■□□□□ 0.45
SNRNP200-204ENST00000480615 PLEKHG2Q9H7P9 1386 aa17.83■□□□□ 0.45
SNRNP200-204ENST00000480615 DLG5Q8TDM6 1919 aa17.83■□□□□ 0.44
SNRNP200-204ENST00000480615 NEUROD2Q15784 382 aa17.83■□□□□ 0.44
SNRNP200-204ENST00000480615 RRP7AQ9Y3A4 280 aaKnown RBP17.83■□□□□ 0.44
SNRNP200-204ENST00000480615 UPF1Q92900 1129 aaKnown RBP eCLIP17.82■□□□□ 0.44
SNRNP200-204ENST00000480615 RUNDC1Q96C34 613 aa17.82■□□□□ 0.44
SNRNP200-204ENST00000480615 NHSQ6T4R5 1651 aa17.82■□□□□ 0.44
SNRNP200-204ENST00000480615 ITGB4P16144 1822 aa17.82■□□□□ 0.44
SNRNP200-204ENST00000480615 LGR6Q9HBX8 967 aa17.81■□□□□ 0.44
SNRNP200-204ENST00000480615 MAP3K5Q99683 1374 aa17.81■□□□□ 0.44
SNRNP200-204ENST00000480615 KDM6AO15550 1401 aaPredicted RBP17.81■□□□□ 0.44
SNRNP200-204ENST00000480615 TNS1Q9HBL0 1735 aaKnown RBP17.81■□□□□ 0.44
SNRNP200-204ENST00000480615 GNAT3A8MTJ3 354 aa17.8■□□□□ 0.44
SNRNP200-204ENST00000480615 HSP90AB1P08238 724 aaKnown RBP17.8■□□□□ 0.44
SNRNP200-204ENST00000480615 SF3B2Q13435 895 aaKnown RBP17.8■□□□□ 0.44
SNRNP200-204ENST00000480615 NKX1-1Q15270 411 aaPredicted RBP17.8■□□□□ 0.44
SNRNP200-204ENST00000480615 DCAF5Q96JK2 942 aa17.8■□□□□ 0.44
SNRNP200-204ENST00000480615 SCN11AQ9UI33 1791 aa17.8■□□□□ 0.44
SNRNP200-204ENST00000480615 BCL9O00512 1426 aa17.8■□□□□ 0.44
SNRNP200-204ENST00000480615 NFE2L2Q16236 605 aa17.8■□□□□ 0.44
SNRNP200-204ENST00000480615 BTAF1O14981 1849 aa17.79■□□□□ 0.44
SNRNP200-204ENST00000480615 APBA3O96018 575 aa17.79■□□□□ 0.44
SNRNP200-204ENST00000480615 DCTN1Q14203 1278 aa17.79■□□□□ 0.44
SNRNP200-204ENST00000480615 MCM10Q7L590 875 aa17.79■□□□□ 0.44
SNRNP200-204ENST00000480615 BCL11BQ9C0K0 894 aaPredicted RBP17.79■□□□□ 0.44
SNRNP200-204ENST00000480615 APAF1O14727 1248 aa17.78■□□□□ 0.44
SNRNP200-204ENST00000480615 RTF1Q92541 710 aaKnown RBP17.78■□□□□ 0.44
SNRNP200-204ENST00000480615 RNMTO43148 476 aaKnown RBP17.77■□□□□ 0.44
SNRNP200-204ENST00000480615 TMPOP42166 694 aaKnown RBP17.77■□□□□ 0.44
SNRNP200-204ENST00000480615 RIPK4P57078 832 aa17.77■□□□□ 0.44
SNRNP200-204ENST00000480615 CABP4P57796 275 aa17.77■□□□□ 0.44
SNRNP200-204ENST00000480615 TMOD3Q9NYL9 352 aa17.77■□□□□ 0.44
SNRNP200-204ENST00000480615 DEFB132Q7Z7B7 95 aa17.76■□□□□ 0.43
SNRNP200-204ENST00000480615 SOCS7O14512 581 aa17.76■□□□□ 0.43
SNRNP200-204ENST00000480615 NFATC2IPQ8NCF5 419 aa17.76■□□□□ 0.43
SNRNP200-204ENST00000480615 IL17REQ8NFR9 667 aa17.76■□□□□ 0.43
SNRNP200-204ENST00000480615 PIGBQ92521 554 aa17.76■□□□□ 0.43
SNRNP200-204ENST00000480615 THUMPD2Q9BTF0 503 aaKnown RBP17.76■□□□□ 0.43
SNRNP200-204ENST00000480615 SALL2Q9Y467 1007 aaPredicted RBP17.75■□□□□ 0.43
SNRNP200-204ENST00000480615 ERVV-2B6SEH9 535 aa17.74■□□□□ 0.43
SNRNP200-204ENST00000480615 EN1Q05925 392 aaPredicted RBP17.74■□□□□ 0.43
SNRNP200-204ENST00000480615 TEFQ10587 303 aa17.73■□□□□ 0.43
SNRNP200-204ENST00000480615 CCDC125Q86Z20 511 aa17.73■□□□□ 0.43
SNRNP200-204ENST00000480615 ADAMTS7Q9UKP4 1686 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms