RNA–Protein interactions for RNA: ENST00000480615.1

SNRNP200-204, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 5

Gene SNRNP200, Length 1,646 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-204ENST00000480615 NISCHQ9Y2I1 1504 aa32.1■■■□□ 2.73
SNRNP200-204ENST00000480615 CCDC180Q9P1Z9 1646 aa28.39■■■□□ 2.14
SNRNP200-204ENST00000480615 ABCC9O60706 1549 aa27.64■■■□□ 2.01
SNRNP200-204ENST00000480615 DCAF8L2P0C7V8 631 aa26.89■■□□□ 1.9
SNRNP200-204ENST00000480615 ZCCHC6Q5VYS8 1495 aaKnown RBP26.8■■□□□ 1.88
SNRNP200-204ENST00000480615 NACADO15069 1562 aa26.61■■□□□ 1.85
SNRNP200-204ENST00000480615 RB1CC1Q8TDY2 1594 aa26.61■■□□□ 1.85
SNRNP200-204ENST00000480615 DCAF1Q9Y4B6 1507 aa26.48■■□□□ 1.83
SNRNP200-204ENST00000480615 MYO15BQ96JP2 1530 aa26.46■■□□□ 1.83
SNRNP200-204ENST00000480615 UNC13AQ9UPW8 1703 aa26.1■■□□□ 1.77
SNRNP200-204ENST00000480615 SCRIBQ14160 1630 aa26.07■■□□□ 1.76
SNRNP200-204ENST00000480615 PABPN1Q86U42 306 aaKnown RBP eCLIP25.9■■□□□ 1.74
SNRNP200-204ENST00000480615 BICRAQ9NZM4 1560 aa25.81■■□□□ 1.72
SNRNP200-204ENST00000480615 SHROOM4Q9ULL8 1493 aa25.73■■□□□ 1.71
SNRNP200-204ENST00000480615 EIF4G1Q04637 1599 aaKnown RBP25.11■■□□□ 1.61
SNRNP200-204ENST00000480615 DNAJC5BQ9UF47 199 aa25.08■■□□□ 1.61
SNRNP200-204ENST00000480615 CECR2Q9BXF3 1484 aa25.03■■□□□ 1.6
SNRNP200-204ENST00000480615 CC2D2AQ9P2K1 1620 aa24.97■■□□□ 1.59
SNRNP200-204ENST00000480615 SMARCA4P51532 1647 aa24.88■■□□□ 1.57
SNRNP200-204ENST00000480615 BAZ1AQ9NRL2 1556 aaPredicted RBP24.86■■□□□ 1.57
SNRNP200-204ENST00000480615 MROH2BQ7Z745 1585 aa24.8■■□□□ 1.56
SNRNP200-204ENST00000480615 ATAD2BQ9ULI0 1458 aa24.64■■□□□ 1.54
SNRNP200-204ENST00000480615 SMARCA2P51531 1590 aa24.62■■□□□ 1.53
SNRNP200-204ENST00000480615 WIZO95785 1651 aa24.59■■□□□ 1.53
SNRNP200-204ENST00000480615 RSF1Q96T23 1441 aaPredicted RBP24.58■■□□□ 1.53
SNRNP200-204ENST00000480615 PEG3Q9GZU2 1588 aa24.55■■□□□ 1.52
SNRNP200-204ENST00000480615 NCAPD3P42695 1498 aa24.54■■□□□ 1.52
SNRNP200-204ENST00000480615 BAZ1BQ9UIG0 1483 aaKnown RBP24.5■■□□□ 1.51
SNRNP200-204ENST00000480615 HMGXB3Q12766 1538 aa24.46■■□□□ 1.51
SNRNP200-204ENST00000480615 SUPT5HO00267 1087 aaKnown RBP24.32■■□□□ 1.48
SNRNP200-204ENST00000480615 TOP2AP11388 1531 aaKnown RBP24.27■■□□□ 1.47
SNRNP200-204ENST00000480615 NESP48681 1621 aa24■■□□□ 1.43
SNRNP200-204ENST00000480615 CCDC88BA6NC98 1476 aa24■■□□□ 1.43
SNRNP200-204ENST00000480615 LAMC3Q9Y6N6 1575 aa23.88■■□□□ 1.41
SNRNP200-204ENST00000480615 CADPSQ9ULU8 1353 aa23.88■■□□□ 1.41
SNRNP200-204ENST00000480615 CFTRP13569 1480 aa23.79■■□□□ 1.4
SNRNP200-204ENST00000480615 ERCC6Q03468 1493 aa23.79■■□□□ 1.4
SNRNP200-204ENST00000480615 KIF21AQ7Z4S6 1674 aa23.73■■□□□ 1.39
SNRNP200-204ENST00000480615 PDS5BQ9NTI5 1447 aa23.71■■□□□ 1.39
SNRNP200-204ENST00000480615 PRDM2Q13029 1718 aa23.68■■□□□ 1.38
SNRNP200-204ENST00000480615 FANCD2Q9BXW9 1451 aa23.64■■□□□ 1.38
SNRNP200-204ENST00000480615 CEP164Q9UPV0 1460 aa23.59■■□□□ 1.37
SNRNP200-204ENST00000480615 THOC2Q8NI27 1593 aaKnown RBP23.51■■□□□ 1.35
SNRNP200-204ENST00000480615 MRC2Q9UBG0 1479 aa23.47■■□□□ 1.35
SNRNP200-204ENST00000480615 URB2Q14146 1524 aaKnown RBP23.4■■□□□ 1.34
SNRNP200-204ENST00000480615 WDR62O43379 1518 aa23.37■■□□□ 1.33
SNRNP200-204ENST00000480615 CUX2O14529 1486 aa23.32■■□□□ 1.32
SNRNP200-204ENST00000480615 TOPBP1Q92547 1522 aa23.29■■□□□ 1.32
SNRNP200-204ENST00000480615 ABCC8Q09428 1581 aa23.29■■□□□ 1.32
SNRNP200-204ENST00000480615 DNMBPQ6XZF7 1577 aa23.28■■□□□ 1.32
SNRNP200-204ENST00000480615 CUX1P39880 1505 aa23.25■■□□□ 1.31
SNRNP200-204ENST00000480615 WRNQ14191 1432 aaPredicted RBP eCLIP23.19■■□□□ 1.3
SNRNP200-204ENST00000480615 SYNJ1O43426 1573 aa23.15■■□□□ 1.3
SNRNP200-204ENST00000480615 POLA1P09884 1462 aaPredicted RBP23.12■■□□□ 1.29
SNRNP200-204ENST00000480615 FGD5Q6ZNL6 1462 aa23.12■■□□□ 1.29
SNRNP200-204ENST00000480615 TOP2BQ02880 1626 aa23.1■■□□□ 1.29
SNRNP200-204ENST00000480615 BIVM-ERCC5R4GMW8 1640 aa23.09■■□□□ 1.29
SNRNP200-204ENST00000480615 RAD54L2Q9Y4B4 1467 aa23.06■■□□□ 1.28
SNRNP200-204ENST00000480615 IFT140Q96RY7 1462 aa23.04■■□□□ 1.28
SNRNP200-204ENST00000480615 SOGA1O94964 1423 aa23.03■■□□□ 1.28
SNRNP200-204ENST00000480615 TARBP1Q13395 1621 aaKnown RBP23.01■■□□□ 1.27
SNRNP200-204ENST00000480615 ZNF608Q9ULD9 1512 aaPredicted RBP22.99■■□□□ 1.27
SNRNP200-204ENST00000480615 TDRD9Q8NDG6 1382 aaKnown RBP22.91■■□□□ 1.26
SNRNP200-204ENST00000480615 EIF4G3O43432 1585 aaKnown RBP22.91■■□□□ 1.26
SNRNP200-204ENST00000480615 AQRO60306 1485 aaKnown RBP eCLIP22.9■■□□□ 1.261e-8■■■■□ 26.1
SNRNP200-204ENST00000480615 WDR97A6NE52 1622 aa22.9■■□□□ 1.26
SNRNP200-204ENST00000480615 TRIM41Q8WV44 630 aa22.9■■□□□ 1.26
SNRNP200-204ENST00000480615 ABCA10Q8WWZ4 1543 aa22.85■■□□□ 1.25
SNRNP200-204ENST00000480615 CHIC1Q5VXU3 224 aa22.78■■□□□ 1.24
SNRNP200-204ENST00000480615 ABCA5Q8WWZ7 1642 aa22.77■■□□□ 1.24
SNRNP200-204ENST00000480615 GAPVD1Q14C86 1478 aa22.77■■□□□ 1.24
SNRNP200-204ENST00000480615 PBRM1Q86U86 1689 aa22.75■■□□□ 1.23
SNRNP200-204ENST00000480615 GRIN2BQ13224 1484 aa22.71■■□□□ 1.23
SNRNP200-204ENST00000480615 SNAPC4Q5SXM2 1469 aa22.69■■□□□ 1.22
SNRNP200-204ENST00000480615 KIF27Q86VH2 1401 aa22.66■■□□□ 1.22
SNRNP200-204ENST00000480615 FBLN2P98095 1184 aa22.64■■□□□ 1.22
SNRNP200-204ENST00000480615 RUSC2Q8N2Y8 1516 aa22.63■■□□□ 1.21
SNRNP200-204ENST00000480615 CHD1O14646 1710 aa22.59■■□□□ 1.21
SNRNP200-204ENST00000480615 MAGI1Q96QZ7 1491 aaPredicted RBP22.59■■□□□ 1.21
SNRNP200-204ENST00000480615 ERICH3Q5RHP9 1530 aa22.59■■□□□ 1.21
SNRNP200-204ENST00000480615 CHMP7Q8WUX9 453 aaPredicted RBP22.55■■□□□ 1.2
SNRNP200-204ENST00000480615 ADAMTS12P58397 1594 aa22.54■■□□□ 1.2
SNRNP200-204ENST00000480615 IGF1RP08069 1367 aa22.53■■□□□ 1.2
SNRNP200-204ENST00000480615 SYNJ2O15056 1496 aa22.52■■□□□ 1.2
SNRNP200-204ENST00000480615 FAM9AQ8IZU1 332 aaPredicted RBP22.52■■□□□ 1.2
SNRNP200-204ENST00000480615 FHAD1B1AJZ9 1412 aa22.48■■□□□ 1.19
SNRNP200-204ENST00000480615 OSCARQ8IYS5 282 aa22.46■■□□□ 1.19
SNRNP200-204ENST00000480615 CUL7Q14999 1698 aa22.46■■□□□ 1.19
SNRNP200-204ENST00000480615 GRIN2AQ12879 1464 aa22.43■■□□□ 1.18
SNRNP200-204ENST00000480615 CARMIL1Q5VZK9 1371 aa22.42■■□□□ 1.18
SNRNP200-204ENST00000480615 CSRNP3Q8WYN3 585 aa22.36■■□□□ 1.17
SNRNP200-204ENST00000480615 EEA1Q15075 1411 aa22.36■■□□□ 1.17
SNRNP200-204ENST00000480615 CEP170Q5SW79 1584 aa22.33■■□□□ 1.17
SNRNP200-204ENST00000480615 RAPGEF2Q9Y4G8 1499 aa22.31■■□□□ 1.16
SNRNP200-204ENST00000480615 DNAJC5Q9H3Z4 198 aa22.31■■□□□ 1.16
SNRNP200-204ENST00000480615 EHMT2Q96KQ7 1210 aa22.3■■□□□ 1.16
SNRNP200-204ENST00000480615 PRXQ9BXM0 1461 aa22.28■■□□□ 1.16
SNRNP200-204ENST00000480615 NUP160Q12769 1436 aa22.28■■□□□ 1.16
SNRNP200-204ENST00000480615 CLASP1Q7Z460 1538 aa22.26■■□□□ 1.15
SNRNP200-204ENST00000480615 KIF21BO75037 1637 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms