RNA–Protein interactions for RNA: ENST00000480539.1

ABCF3-213, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-213ENST00000480539 PRKRIP1Q9H875 184 aaPredicted RBP20.37■□□□□ 0.85
ABCF3-213ENST00000480539 UPF1Q92900 1129 aaKnown RBP eCLIP20.36■□□□□ 0.85
ABCF3-213ENST00000480539 KDRP35968 1356 aa20.35■□□□□ 0.85
ABCF3-213ENST00000480539 U2SURPO15042 1029 aaKnown RBP20.35■□□□□ 0.85
ABCF3-213ENST00000480539 SULT6B1Q6IMI4 303 aa20.35■□□□□ 0.85
ABCF3-213ENST00000480539 ZCRB1Q8TBF4 217 aaKnown RBP20.35■□□□□ 0.85
ABCF3-213ENST00000480539 TNS1Q9HBL0 1735 aaKnown RBP20.35■□□□□ 0.85
ABCF3-213ENST00000480539 HMOX1P09601 288 aa20.34■□□□□ 0.85
ABCF3-213ENST00000480539 FAM196AQ6ZSG2 479 aa20.34■□□□□ 0.85
ABCF3-213ENST00000480539 DDX54Q8TDD1 881 aaKnown RBP20.34■□□□□ 0.85
ABCF3-213ENST00000480539 PCDH11XQ9BZA7 1347 aa20.32■□□□□ 0.84
ABCF3-213ENST00000480539 PCDH11YQ9BZA8 1340 aa20.32■□□□□ 0.84
ABCF3-213ENST00000480539 DOT1LQ8TEK3 1739 aa20.32■□□□□ 0.84
ABCF3-213ENST00000480539 SBF2Q86WG5 1849 aa20.3■□□□□ 0.84
ABCF3-213ENST00000480539 BCL9O00512 1426 aa20.3■□□□□ 0.84
ABCF3-213ENST00000480539 NHSQ6T4R5 1651 aa20.3■□□□□ 0.84
ABCF3-213ENST00000480539 TRIM37O94972 964 aa20.29■□□□□ 0.84
ABCF3-213ENST00000480539 SPG7Q9UQ90 795 aa20.29■□□□□ 0.84
ABCF3-213ENST00000480539 PLEKHG2Q9H7P9 1386 aa20.29■□□□□ 0.84
ABCF3-213ENST00000480539 TOGARAM1Q9Y4F4 1720 aa20.28■□□□□ 0.84
ABCF3-213ENST00000480539 CYP27B1O15528 508 aa20.28■□□□□ 0.84
ABCF3-213ENST00000480539 ACSBG1Q96GR2 724 aa20.28■□□□□ 0.84
ABCF3-213ENST00000480539 NUDCQ9Y266 331 aa20.28■□□□□ 0.84
ABCF3-213ENST00000480539 ANP32CO43423 234 aa20.27■□□□□ 0.84
ABCF3-213ENST00000480539 U2AF1L5P0DN76 240 aaPredicted RBP20.26■□□□□ 0.83
ABCF3-213ENST00000480539 U2AF1Q01081 240 aaKnown RBP eCLIP20.26■□□□□ 0.83
ABCF3-213ENST00000480539 SF3B2Q13435 895 aaKnown RBP20.26■□□□□ 0.83
ABCF3-213ENST00000480539 ZNF530Q6P9A1 599 aaPredicted RBP20.25■□□□□ 0.83
ABCF3-213ENST00000480539 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.25■□□□□ 0.83
ABCF3-213ENST00000480539 PLEKHO1Q53GL0 409 aaPredicted RBP20.24■□□□□ 0.83
ABCF3-213ENST00000480539 PTF1AQ7RTS3 328 aa20.24■□□□□ 0.83
ABCF3-213ENST00000480539 RSPH6AQ9H0K4 717 aa20.24■□□□□ 0.83
ABCF3-213ENST00000480539 PHKG2P15735 406 aa20.23■□□□□ 0.83
ABCF3-213ENST00000480539 PRKAR2BP31323 418 aa20.23■□□□□ 0.83
ABCF3-213ENST00000480539 KCNQ2O43526 872 aa20.22■□□□□ 0.83
ABCF3-213ENST00000480539 AMOTQ4VCS5 1084 aa20.22■□□□□ 0.83
ABCF3-213ENST00000480539 DEFB132Q7Z7B7 95 aa20.22■□□□□ 0.83
ABCF3-213ENST00000480539 CCDC125Q86Z20 511 aa20.22■□□□□ 0.83
ABCF3-213ENST00000480539 BTAF1O14981 1849 aa20.21■□□□□ 0.83
ABCF3-213ENST00000480539 IFNL2Q8IZJ0 200 aa20.21■□□□□ 0.83
ABCF3-213ENST00000480539 APBA3O96018 575 aa20.2■□□□□ 0.82
ABCF3-213ENST00000480539 SYTL4Q96C24 671 aaPredicted RBP20.2■□□□□ 0.82
ABCF3-213ENST00000480539 BCL11BQ9C0K0 894 aaPredicted RBP20.2■□□□□ 0.82
ABCF3-213ENST00000480539 KDM6AO15550 1401 aaPredicted RBP20.19■□□□□ 0.82
ABCF3-213ENST00000480539 BAG6P46379 1132 aa20.19■□□□□ 0.82
ABCF3-213ENST00000480539 C1orf141Q5JVX7 400 aa20.19■□□□□ 0.82
ABCF3-213ENST00000480539 MTHFSDQ2M296 383 aaKnown RBP20.18■□□□□ 0.82
ABCF3-213ENST00000480539 RGPD3A6NKT7 1758 aaPredicted RBP20.17■□□□□ 0.82
ABCF3-213ENST00000480539 RGPD4Q7Z3J3 1758 aa20.17■□□□□ 0.82
ABCF3-213ENST00000480539 PRIM1P49642 420 aaKnown RBP20.17■□□□□ 0.82
ABCF3-213ENST00000480539 EN1Q05925 392 aaPredicted RBP20.17■□□□□ 0.82
ABCF3-213ENST00000480539 NKX1-1Q15270 411 aaPredicted RBP20.17■□□□□ 0.82
ABCF3-213ENST00000480539 CCDC184Q52MB2 194 aa20.17■□□□□ 0.82
ABCF3-213ENST00000480539 ITGB4P16144 1822 aa20.16■□□□□ 0.82
ABCF3-213ENST00000480539 FCHSD2O94868 740 aa20.16■□□□□ 0.82
ABCF3-213ENST00000480539 WDR43Q15061 677 aaKnown RBP eCLIP20.16■□□□□ 0.82
ABCF3-213ENST00000480539 PHACTR3Q96KR7 559 aa20.16■□□□□ 0.82
ABCF3-213ENST00000480539 RREB1Q92766 1687 aa20.16■□□□□ 0.82
ABCF3-213ENST00000480539 AKAP4Q5JQC9 854 aa20.15■□□□□ 0.82
ABCF3-213ENST00000480539 MAP3K5Q99683 1374 aa20.14■□□□□ 0.81
ABCF3-213ENST00000480539 HSP90AB1P08238 724 aaKnown RBP20.14■□□□□ 0.81
ABCF3-213ENST00000480539 EZH2Q15910 746 aaKnown RBP20.14■□□□□ 0.81
ABCF3-213ENST00000480539 MPRIPQ6WCQ1 1025 aa20.14■□□□□ 0.81
ABCF3-213ENST00000480539 SCN11AQ9UI33 1791 aa20.13■□□□□ 0.81
ABCF3-213ENST00000480539 GAS2L2Q8NHY3 880 aa20.13■□□□□ 0.81
ABCF3-213ENST00000480539 DCAF5Q96JK2 942 aa20.13■□□□□ 0.81
ABCF3-213ENST00000480539 ADAMTS7Q9UKP4 1686 aa20.13■□□□□ 0.81
ABCF3-213ENST00000480539 KAT6BQ8WYB5 2073 aa20.12■□□□□ 0.81
ABCF3-213ENST00000480539 VIRMAQ69YN4 1812 aaKnown RBP20.12■□□□□ 0.81
ABCF3-213ENST00000480539 MRS2Q9HD23 443 aa20.12■□□□□ 0.81
ABCF3-213ENST00000480539 NUP188Q5SRE5 1749 aa20.12■□□□□ 0.81
ABCF3-213ENST00000480539 MRC1P22897 1456 aa20.11■□□□□ 0.81
ABCF3-213ENST00000480539 MAPK8IP3Q9UPT6 1336 aa20.11■□□□□ 0.81
ABCF3-213ENST00000480539 CAMKK2Q96RR4 588 aa20.11■□□□□ 0.81
ABCF3-213ENST00000480539 PLEKHF1Q96S99 279 aa20.11■□□□□ 0.81
ABCF3-213ENST00000480539 NEFMP07197 916 aa20.1■□□□□ 0.81
ABCF3-213ENST00000480539 CCDC146Q8IYE0 955 aa20.1■□□□□ 0.81
ABCF3-213ENST00000480539 TMOD3Q9NYL9 352 aa20.1■□□□□ 0.81
ABCF3-213ENST00000480539 PIGBQ92521 554 aa20.09■□□□□ 0.81
ABCF3-213ENST00000480539 ADAMTS8Q9UP79 889 aa20.09■□□□□ 0.81
ABCF3-213ENST00000480539 PLSCR1O15162 318 aa20.08■□□□□ 0.81
ABCF3-213ENST00000480539 DIEXFQ68CQ4 756 aaKnown RBP20.08■□□□□ 0.81
ABCF3-213ENST00000480539 LGR6Q9HBX8 967 aa20.08■□□□□ 0.81
ABCF3-213ENST00000480539 GNAT3A8MTJ3 354 aa20.07■□□□□ 0.8
ABCF3-213ENST00000480539 ERVV-2B6SEH9 535 aa20.07■□□□□ 0.8
ABCF3-213ENST00000480539 RNMTO43148 476 aaKnown RBP20.07■□□□□ 0.8
ABCF3-213ENST00000480539 CABP4P57796 275 aa20.07■□□□□ 0.8
ABCF3-213ENST00000480539 PNNQ9H307 717 aaKnown RBP20.07■□□□□ 0.8
ABCF3-213ENST00000480539 LY75O60449 1722 aa20.07■□□□□ 0.8
ABCF3-213ENST00000480539 PALLDQ8WX93 1383 aa20.07■□□□□ 0.8
ABCF3-213ENST00000480539 DLG5Q8TDM6 1919 aa20.06■□□□□ 0.8
ABCF3-213ENST00000480539 PAPPAQ13219 1627 aa20.05■□□□□ 0.8
ABCF3-213ENST00000480539 NFE2L2Q16236 605 aa20.04■□□□□ 0.8
ABCF3-213ENST00000480539 TXNRD1Q16881 649 aa20.04■□□□□ 0.8
ABCF3-213ENST00000480539 MCM10Q7L590 875 aa20.03■□□□□ 0.8
ABCF3-213ENST00000480539 PROM2Q8N271 834 aa20.03■□□□□ 0.8
ABCF3-213ENST00000480539 RUNDC1Q96C34 613 aa20.03■□□□□ 0.8
ABCF3-213ENST00000480539 SLC52A2Q9HAB3 445 aa20.03■□□□□ 0.8
ABCF3-213ENST00000480539 ASAP1Q9ULH1 1129 aa20.03■□□□□ 0.8
ABCF3-213ENST00000480539 SIPA1L3O60292 1781 aaPredicted RBP20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms