RNA–Protein interactions for RNA: ENST00000480179.1

PKNOX1-206, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 1,725 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-206ENST00000480179 LMOD2Q6P5Q4 547 aa18.74■□□□□ 0.59
PKNOX1-206ENST00000480179 TRPC5Q9UL62 973 aaPredicted RBP18.74■□□□□ 0.59
PKNOX1-206ENST00000480179 COG6Q9Y2V7 657 aa18.73■□□□□ 0.59
PKNOX1-206ENST00000480179 KDRP35968 1356 aa18.72■□□□□ 0.59
PKNOX1-206ENST00000480179 KRT28Q7Z3Y7 464 aa18.72■□□□□ 0.59
PKNOX1-206ENST00000480179 SSH1Q8WYL5 1049 aa18.72■□□□□ 0.59
PKNOX1-206ENST00000480179 SLIT3O75094 1523 aa18.72■□□□□ 0.59
PKNOX1-206ENST00000480179 RGS12O14924 1447 aa18.72■□□□□ 0.59
PKNOX1-206ENST00000480179 FNBP4Q8N3X1 1017 aaPredicted RBP18.71■□□□□ 0.59
PKNOX1-206ENST00000480179 MBIPQ9NS73 344 aa18.71■□□□□ 0.59
PKNOX1-206ENST00000480179 RBM19Q9Y4C8 960 aaKnown RBP18.71■□□□□ 0.59
PKNOX1-206ENST00000480179 ZNF853P0CG23 659 aa18.7■□□□□ 0.58
PKNOX1-206ENST00000480179 RLBP1P12271 317 aa18.7■□□□□ 0.58
PKNOX1-206ENST00000480179 ZKSCAN2Q63HK3 967 aa18.7■□□□□ 0.58
PKNOX1-206ENST00000480179 KCNH5Q8NCM2 988 aa18.7■□□□□ 0.58
PKNOX1-206ENST00000480179 CLUAP1Q96AJ1 413 aa18.7■□□□□ 0.58
PKNOX1-206ENST00000480179 PHRF1Q9P1Y6 1649 aaKnown RBP18.7■□□□□ 0.58
PKNOX1-206ENST00000480179 ALS2Q96Q42 1657 aa18.69■□□□□ 0.58
PKNOX1-206ENST00000480179 MCM10Q7L590 875 aa18.69■□□□□ 0.58
PKNOX1-206ENST00000480179 IP6K1Q92551 441 aa18.69■□□□□ 0.58
PKNOX1-206ENST00000480179 CFAP44Q96MT7 982 aa18.69■□□□□ 0.58
PKNOX1-206ENST00000480179 KDM2BQ8NHM5 1336 aa18.68■□□□□ 0.58
PKNOX1-206ENST00000480179 MTHFSDQ2M296 383 aaKnown RBP18.68■□□□□ 0.58
PKNOX1-206ENST00000480179 USHBP1Q8N6Y0 703 aa18.67■□□□□ 0.58
PKNOX1-206ENST00000480179 CENPQQ7L2Z9 268 aaPredicted RBP18.66■□□□□ 0.58
PKNOX1-206ENST00000480179 FTSJ3Q8IY81 847 aaKnown RBP18.66■□□□□ 0.58
PKNOX1-206ENST00000480179 USP19O94966 1318 aa18.66■□□□□ 0.58
PKNOX1-206ENST00000480179 RGPD2P0DJD1 1756 aa18.66■□□□□ 0.58
PKNOX1-206ENST00000480179 ALDH1L2Q3SY69 923 aa18.66■□□□□ 0.58
PKNOX1-206ENST00000480179 TSPYL6Q8N831 410 aa18.66■□□□□ 0.58
PKNOX1-206ENST00000480179 PXDNQ92626 1479 aa18.65■□□□□ 0.58
PKNOX1-206ENST00000480179 KIF16BQ96L93 1317 aa18.65■□□□□ 0.58
PKNOX1-206ENST00000480179 GCP02774 474 aa18.65■□□□□ 0.58
PKNOX1-206ENST00000480179 DZIP1LQ8IYY4 767 aaKnown RBP18.65■□□□□ 0.58
PKNOX1-206ENST00000480179 GAS2L2Q8NHY3 880 aa18.65■□□□□ 0.58
PKNOX1-206ENST00000480179 NOB1Q9ULX3 412 aaKnown RBP18.65■□□□□ 0.58
PKNOX1-206ENST00000480179 COL22A1Q8NFW1 1626 aaPredicted RBP18.64■□□□□ 0.58
PKNOX1-206ENST00000480179 ELL2O00472 640 aaPredicted RBP18.64■□□□□ 0.57
PKNOX1-206ENST00000480179 TRIM27P14373 513 aa18.64■□□□□ 0.57
PKNOX1-206ENST00000480179 VAMP4O75379 141 aa18.63■□□□□ 0.57
PKNOX1-206ENST00000480179 MS4A1P11836 297 aa18.63■□□□□ 0.57
PKNOX1-206ENST00000480179 SKAP1Q86WV1 359 aa18.63■□□□□ 0.57
PKNOX1-206ENST00000480179 C8orf58Q8NAV2 365 aa18.63■□□□□ 0.57
PKNOX1-206ENST00000480179 RTF1Q92541 710 aaKnown RBP18.63■□□□□ 0.57
PKNOX1-206ENST00000480179 CRB1P82279 1406 aa18.63■□□□□ 0.57
PKNOX1-206ENST00000480179 MVPQ14764 893 aaKnown RBP18.63■□□□□ 0.57
PKNOX1-206ENST00000480179 TWISTNBQ3B726 338 aaPredicted RBP18.63■□□□□ 0.57
PKNOX1-206ENST00000480179 ATF7IPQ6VMQ6 1270 aa18.63■□□□□ 0.57
PKNOX1-206ENST00000480179 ZNF428Q96B54 188 aa18.63■□□□□ 0.57
PKNOX1-206ENST00000480179 ATRNO75882 1429 aa18.62■□□□□ 0.57
PKNOX1-206ENST00000480179 LRRC37A3O60309 1634 aa18.62■□□□□ 0.57
PKNOX1-206ENST00000480179 ARHGEF25Q86VW2 580 aa18.62■□□□□ 0.57
PKNOX1-206ENST00000480179 HAP1P54257 671 aaPredicted RBP18.61■□□□□ 0.57
PKNOX1-206ENST00000480179 SPATA31A3Q5VYP0 1347 aa18.61■□□□□ 0.57
PKNOX1-206ENST00000480179 CHL1O00533 1208 aa18.6■□□□□ 0.57
PKNOX1-206ENST00000480179 TCERG1O14776 1098 aaKnown RBP18.6■□□□□ 0.57
PKNOX1-206ENST00000480179 IPO8O15397 1037 aaKnown RBP18.6■□□□□ 0.57
PKNOX1-206ENST00000480179 NBPF6Q5VWK0 638 aa18.6■□□□□ 0.57
PKNOX1-206ENST00000480179 NBPF4Q96M43 638 aa18.6■□□□□ 0.57
PKNOX1-206ENST00000480179 MRPL50Q8N5N7 158 aaKnown RBP18.6■□□□□ 0.57
PKNOX1-206ENST00000480179 GJD4Q96KN9 370 aaPredicted RBP18.6■□□□□ 0.57
PKNOX1-206ENST00000480179 RGPD5Q99666 1765 aa18.59■□□□□ 0.57
PKNOX1-206ENST00000480179 ITPRIPQ8IWB1 547 aa18.59■□□□□ 0.57
PKNOX1-206ENST00000480179 MAP3K5Q99683 1374 aa18.59■□□□□ 0.57
PKNOX1-206ENST00000480179 BCL9LQ86UU0 1499 aa18.59■□□□□ 0.57
PKNOX1-206ENST00000480179 TNS3Q68CZ2 1445 aa18.58■□□□□ 0.57
PKNOX1-206ENST00000480179 GNAT3A8MTJ3 354 aa18.57■□□□□ 0.56
PKNOX1-206ENST00000480179 IGHDP01880 384 aa18.57■□□□□ 0.56
PKNOX1-206ENST00000480179 AAMPQ13685 434 aa18.57■□□□□ 0.56
PKNOX1-206ENST00000480179 KRT24Q2M2I5 525 aa18.57■□□□□ 0.56
PKNOX1-206ENST00000480179 UNC5CLQ8IV45 518 aa18.57■□□□□ 0.56
PKNOX1-206ENST00000480179 ANKRD24Q8TF21 1146 aa18.57■□□□□ 0.56
PKNOX1-206ENST00000480179 MIS18AQ9NYP9 233 aa18.57■□□□□ 0.56
PKNOX1-206ENST00000480179 CCDC125Q86Z20 511 aa18.57■□□□□ 0.56
PKNOX1-206ENST00000480179 TMEM57Q8N5G2 664 aa18.57■□□□□ 0.56
PKNOX1-206ENST00000480179 BRPF1P55201 1214 aaPredicted RBP18.56■□□□□ 0.56
PKNOX1-206ENST00000480179 ZC3H6P61129 1189 aaKnown RBP18.56■□□□□ 0.56
PKNOX1-206ENST00000480179 TSPYL4Q9UJ04 414 aa18.56■□□□□ 0.56
PKNOX1-206ENST00000480179 CAMTA1Q9Y6Y1 1673 aa18.56■□□□□ 0.56
PKNOX1-206ENST00000480179 HTATSF1O43719 755 aaKnown RBP18.55■□□□□ 0.56
PKNOX1-206ENST00000480179 PCDHB15Q9Y5E8 787 aa18.55■□□□□ 0.56
PKNOX1-206ENST00000480179 CRYBG1Q9Y4K1 1723 aa18.55■□□□□ 0.56
PKNOX1-206ENST00000480179 KIAA0232Q92628 1395 aa18.55■□□□□ 0.56
PKNOX1-206ENST00000480179 DDX19BQ9UMR2 479 aa18.54■□□□□ 0.56
PKNOX1-206ENST00000480179 AXIN2Q9Y2T1 843 aa18.54■□□□□ 0.56
PKNOX1-206ENST00000480179 CABLES1Q8TDN4 633 aa18.53■□□□□ 0.56
PKNOX1-206ENST00000480179 NCAPD2Q15021 1401 aa18.52■□□□□ 0.56
PKNOX1-206ENST00000480179 LMO7Q8WWI1 1683 aa18.52■□□□□ 0.56
PKNOX1-206ENST00000480179 IL17REQ8NFR9 667 aa18.51■□□□□ 0.55
PKNOX1-206ENST00000480179 ARHGAP45Q92619 1136 aa18.51■□□□□ 0.55
PKNOX1-206ENST00000480179 COL18A1P39060 1754 aa18.5■□□□□ 0.55
PKNOX1-206ENST00000480179 SLIT2O94813 1529 aa18.5■□□□□ 0.55
PKNOX1-206ENST00000480179 RGS3P49796 1198 aa18.5■□□□□ 0.55
PKNOX1-206ENST00000480179 ZNF530Q6P9A1 599 aaPredicted RBP18.49■□□□□ 0.55
PKNOX1-206ENST00000480179 CCDC9Q9Y3X0 531 aaKnown RBP18.49■□□□□ 0.55
PKNOX1-206ENST00000480179 ERBB3P21860 1342 aa18.49■□□□□ 0.55
PKNOX1-206ENST00000480179 PLEKHO1Q53GL0 409 aaPredicted RBP18.48■□□□□ 0.55
PKNOX1-206ENST00000480179 API5Q9BZZ5 524 aaKnown RBP18.48■□□□□ 0.55
PKNOX1-206ENST00000480179 RWDD1Q9H446 243 aaPredicted RBP18.48■□□□□ 0.55
PKNOX1-206ENST00000480179 ABCC4O15439 1325 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms