RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 ERVK-7P63135 1459 aa25.52■■□□□ 1.68
SDF4-206ENST00000478938 REREQ9P2R6 1566 aa25.52■■□□□ 1.68
SDF4-206ENST00000478938 CYP2C19P33261 490 aa25.52■■□□□ 1.68
SDF4-206ENST00000478938 GIMAP6Q6P9H5 292 aa25.52■■□□□ 1.68
SDF4-206ENST00000478938 ZNF518AQ6AHZ1 1483 aa25.52■■□□□ 1.68
SDF4-206ENST00000478938 FBXO38Q6PIJ6 1188 aa25.51■■□□□ 1.68
SDF4-206ENST00000478938 NSD3Q9BZ95 1437 aa25.51■■□□□ 1.67
SDF4-206ENST00000478938 MED14O60244 1454 aa25.51■■□□□ 1.67
SDF4-206ENST00000478938 OTUD7AQ8TE49 926 aaPredicted RBP25.51■■□□□ 1.67
SDF4-206ENST00000478938 ZNF592Q92610 1267 aa25.51■■□□□ 1.67
SDF4-206ENST00000478938 TNNT3P45378 269 aaPredicted RBP25.5■■□□□ 1.67
SDF4-206ENST00000478938 SPAG9O60271 1321 aaKnown RBP25.5■■□□□ 1.67
SDF4-206ENST00000478938 TCHHQ07283 1943 aa25.5■■□□□ 1.67
SDF4-206ENST00000478938 RTF1Q92541 710 aaKnown RBP25.5■■□□□ 1.67
SDF4-206ENST00000478938 NOL10Q9BSC4 688 aaKnown RBP25.5■■□□□ 1.67
SDF4-206ENST00000478938 SRPK2P78362 688 aaKnown RBP25.49■■□□□ 1.67
SDF4-206ENST00000478938 TRIM35Q9UPQ4 493 aa25.49■■□□□ 1.67
SDF4-206ENST00000478938 PPRC1Q5VV67 1664 aaKnown RBP25.49■■□□□ 1.67
SDF4-206ENST00000478938 CFAP53Q96M91 514 aa25.49■■□□□ 1.67
SDF4-206ENST00000478938 FUCA2Q9BTY2 467 aa25.49■■□□□ 1.67
SDF4-206ENST00000478938 RSPH14Q9UHP6 348 aa25.49■■□□□ 1.67
SDF4-206ENST00000478938 CNPY2Q9Y2B0 182 aa25.49■■□□□ 1.67
SDF4-206ENST00000478938 SDSP20132 328 aa25.48■■□□□ 1.67
SDF4-206ENST00000478938 PAXBP1Q9Y5B6 917 aa25.48■■□□□ 1.67
SDF4-206ENST00000478938 KLHL34Q8N239 644 aa25.48■■□□□ 1.67
SDF4-206ENST00000478938 ZNF215Q9UL58 517 aaPredicted RBP25.48■■□□□ 1.67
SDF4-206ENST00000478938 CD109Q6YHK3 1445 aa25.47■■□□□ 1.67
SDF4-206ENST00000478938 MLECQ14165 292 aa25.47■■□□□ 1.67
SDF4-206ENST00000478938 CCDC186Q7Z3E2 898 aa25.47■■□□□ 1.67
SDF4-206ENST00000478938 CFAP44Q96MT7 982 aa25.47■■□□□ 1.67
SDF4-206ENST00000478938 ADGRB2O60241 1585 aa25.47■■□□□ 1.67
SDF4-206ENST00000478938 TMX1Q9H3N1 280 aa25.47■■□□□ 1.67
SDF4-206ENST00000478938 TTC37Q6PGP7 1564 aa25.46■■□□□ 1.67
SDF4-206ENST00000478938 PLEKHD1A6NEE1 506 aa25.46■■□□□ 1.67
SDF4-206ENST00000478938 CUL4AQ13619 759 aa25.46■■□□□ 1.67
SDF4-206ENST00000478938 SOX12O15370 315 aa25.46■■□□□ 1.67
SDF4-206ENST00000478938 ELF2Q15723 593 aa25.46■■□□□ 1.67
SDF4-206ENST00000478938 ZNF446Q9NWS9 450 aa25.46■■□□□ 1.67
SDF4-206ENST00000478938 UNC13BO14795 1591 aa25.45■■□□□ 1.66
SDF4-206ENST00000478938 CASC1Q6TDU7 716 aa25.45■■□□□ 1.66
SDF4-206ENST00000478938 GTF3C6Q969F1 213 aa25.45■■□□□ 1.66
SDF4-206ENST00000478938 EFCC1Q9HA90 598 aa25.45■■□□□ 1.66
SDF4-206ENST00000478938 NRBP1Q9UHY1 535 aa25.45■■□□□ 1.66
SDF4-206ENST00000478938 TMPOP42166 694 aaKnown RBP25.44■■□□□ 1.66
SDF4-206ENST00000478938 KIF1BPQ96EK5 621 aa25.44■■□□□ 1.66
SDF4-206ENST00000478938 REC8O95072 547 aa25.44■■□□□ 1.66
SDF4-206ENST00000478938 TPD52L1Q16890 204 aaPredicted RBP25.44■■□□□ 1.66
SDF4-206ENST00000478938 OSCARQ8IYS5 282 aa25.44■■□□□ 1.66
SDF4-206ENST00000478938 SRCIN1Q9C0H9 1055 aa25.44■■□□□ 1.66
SDF4-206ENST00000478938 FAM193AP78312 1265 aa25.43■■□□□ 1.66
SDF4-206ENST00000478938 NCBP3Q53F19 620 aaKnown RBP25.43■■□□□ 1.66
SDF4-206ENST00000478938 CREBRFQ8IUR6 639 aa25.42■■□□□ 1.66
SDF4-206ENST00000478938 ZKSCAN7Q9P0L1 754 aaPredicted RBP25.42■■□□□ 1.66
SDF4-206ENST00000478938 CEP135Q66GS9 1140 aa25.42■■□□□ 1.66
SDF4-206ENST00000478938 TMEM87AQ8NBN3 555 aa25.41■■□□□ 1.66
SDF4-206ENST00000478938 NFATC2IPQ8NCF5 419 aa25.41■■□□□ 1.66
SDF4-206ENST00000478938 NEK11Q8NG66 645 aa25.41■■□□□ 1.66
SDF4-206ENST00000478938 ATP10AO60312 1499 aa25.41■■□□□ 1.66
SDF4-206ENST00000478938 ATAD2Q6PL18 1390 aa25.4■■□□□ 1.66
SDF4-206ENST00000478938 UHRF1BP1LA0JNW5 1464 aa25.4■■□□□ 1.66
SDF4-206ENST00000478938 NPHP1O15259 732 aa25.4■■□□□ 1.66
SDF4-206ENST00000478938 ALDH1L2Q3SY69 923 aa25.4■■□□□ 1.66
SDF4-206ENST00000478938 JPH4Q96JJ6 628 aa25.4■■□□□ 1.66
SDF4-206ENST00000478938 YY1AP1Q9H869 796 aa25.4■■□□□ 1.66
SDF4-206ENST00000478938 WDR33Q9C0J8 1336 aaKnown RBP25.4■■□□□ 1.66
SDF4-206ENST00000478938 YEATS2Q9ULM3 1422 aa25.4■■□□□ 1.66
SDF4-206ENST00000478938 ERC2O15083 957 aa25.4■■□□□ 1.66
SDF4-206ENST00000478938 DRC7Q8IY82 874 aa25.4■■□□□ 1.66
SDF4-206ENST00000478938 ADGRL1O94910 1474 aa25.39■■□□□ 1.66
SDF4-206ENST00000478938 ARHGEF5Q12774 1597 aa25.39■■□□□ 1.66
SDF4-206ENST00000478938 NOP2P46087 812 aaKnown RBP25.39■■□□□ 1.66
SDF4-206ENST00000478938 UBE2HP62256 183 aa25.39■■□□□ 1.66
SDF4-206ENST00000478938 GEMIN8Q9NWZ8 242 aaKnown RBP25.39■■□□□ 1.66
SDF4-206ENST00000478938 RPAP1Q9BWH6 1393 aaPredicted RBP25.39■■□□□ 1.66
SDF4-206ENST00000478938 ZSCAN25Q6NSZ9 544 aa25.39■■□□□ 1.65
SDF4-206ENST00000478938 RASSF4Q9H2L5 321 aa25.39■■□□□ 1.65
SDF4-206ENST00000478938 APBB1O00213 710 aa25.38■■□□□ 1.65
SDF4-206ENST00000478938 INTS4Q96HW7 963 aaKnown RBP25.38■■□□□ 1.65
SDF4-206ENST00000478938 RNF216Q9NWF9 866 aaPredicted RBP25.38■■□□□ 1.65
SDF4-206ENST00000478938 ERBB3P21860 1342 aa25.38■■□□□ 1.65
SDF4-206ENST00000478938 IQGAP3Q86VI3 1631 aa25.38■■□□□ 1.65
SDF4-206ENST00000478938 FIBPO43427 364 aa25.38■■□□□ 1.65
SDF4-206ENST00000478938 ZSCAN21Q9Y5A6 473 aaPredicted RBP25.38■■□□□ 1.65
SDF4-206ENST00000478938 LOC102724159A0A0B4J2E5 919 aa25.37■■□□□ 1.65
SDF4-206ENST00000478938 PWP2Q15269 919 aaKnown RBP25.37■■□□□ 1.65
SDF4-206ENST00000478938 SLC12A5Q9H2X9 1139 aa25.37■■□□□ 1.65
SDF4-206ENST00000478938 PALD1Q9ULE6 856 aa25.37■■□□□ 1.65
SDF4-206ENST00000478938 CARMIL2Q6F5E8 1435 aa25.36■■□□□ 1.65
SDF4-206ENST00000478938 MCM2P49736 904 aa25.36■■□□□ 1.65
SDF4-206ENST00000478938 GYS2P54840 703 aa25.36■■□□□ 1.65
SDF4-206ENST00000478938 SYT10Q6XYQ8 523 aa25.36■■□□□ 1.65
SDF4-206ENST00000478938 SLC52A1Q9NWF4 448 aa25.36■■□□□ 1.65
SDF4-206ENST00000478938 TRIM66O15016 1216 aa25.36■■□□□ 1.65
SDF4-206ENST00000478938 DHX16O60231 1041 aaKnown RBP25.36■■□□□ 1.65
SDF4-206ENST00000478938 PLEKHF1Q96S99 279 aa25.36■■□□□ 1.65
SDF4-206ENST00000478938 DUOX2Q9NRD8 1548 aa25.35■■□□□ 1.65
SDF4-206ENST00000478938 LUZP1Q86V48 1076 aa25.35■■□□□ 1.65
SDF4-206ENST00000478938 USP27XA6NNY8 438 aa25.34■■□□□ 1.65
SDF4-206ENST00000478938 C10orf67Q8IYJ2 551 aa25.34■■□□□ 1.65
SDF4-206ENST00000478938 DCTPP1Q9H773 170 aa25.34■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms