RNA–Protein interactions for RNA: ENST00000477639.5

TMED4-204, Transcript of transmembrane p24 trafficking protein 4, humanhuman

TSL 2

Gene TMED4, Length 1,950 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED4-204ENST00000477639 HSP90AB2PQ58FF8 381 aa25.97■■□□□ 1.75
TMED4-204ENST00000477639 XIRP1Q702N8 1843 aaKnown RBP25.97■■□□□ 1.75
TMED4-204ENST00000477639 KIF24Q5T7B8 1368 aa25.97■■□□□ 1.75
TMED4-204ENST00000477639 MFAP1P55081 439 aaKnown RBP25.96■■□□□ 1.75
TMED4-204ENST00000477639 SIRT2Q8IXJ6 389 aa25.96■■□□□ 1.75
TMED4-204ENST00000477639 C1orf115Q9H7X2 142 aa25.96■■□□□ 1.75
TMED4-204ENST00000477639 TMEM94Q12767 1356 aa25.96■■□□□ 1.75
TMED4-204ENST00000477639 CHL1O00533 1208 aa25.96■■□□□ 1.75
TMED4-204ENST00000477639 TTC21AQ8NDW8 1320 aa25.95■■□□□ 1.74
TMED4-204ENST00000477639 ANKRD45Q5TZF3 282 aa25.93■■□□□ 1.74
TMED4-204ENST00000477639 KIAA0232Q92628 1395 aa25.92■■□□□ 1.74
TMED4-204ENST00000477639 PIP4K2BP78356 416 aa25.92■■□□□ 1.74
TMED4-204ENST00000477639 TOM1O60784 492 aa25.91■■□□□ 1.74
TMED4-204ENST00000477639 BMP2KLQ5H9B9 411 aa25.91■■□□□ 1.74
TMED4-204ENST00000477639 SLKQ9H2G2 1235 aaPredicted RBP25.91■■□□□ 1.74
TMED4-204ENST00000477639 ARHGEF10O15013 1369 aa25.91■■□□□ 1.74
TMED4-204ENST00000477639 MCM10Q7L590 875 aa25.91■■□□□ 1.74
TMED4-204ENST00000477639 MAP3K19Q56UN5 1328 aa25.9■■□□□ 1.74
TMED4-204ENST00000477639 CRB1P82279 1406 aa25.89■■□□□ 1.74
TMED4-204ENST00000477639 HAP1P54257 671 aaPredicted RBP25.89■■□□□ 1.74
TMED4-204ENST00000477639 INTS3Q68E01 1043 aaKnown RBP25.89■■□□□ 1.74
TMED4-204ENST00000477639 KRT24Q2M2I5 525 aa25.88■■□□□ 1.73
TMED4-204ENST00000477639 RGS12O14924 1447 aa25.88■■□□□ 1.73
TMED4-204ENST00000477639 C14orf37Q86TY3 774 aa25.87■■□□□ 1.73
TMED4-204ENST00000477639 SBNO1A3KN83 1393 aa25.87■■□□□ 1.73
TMED4-204ENST00000477639 XRN1Q8IZH2 1706 aaKnown RBP25.86■■□□□ 1.73
TMED4-204ENST00000477639 RBM25P49756 843 aaKnown RBP25.86■■□□□ 1.73
TMED4-204ENST00000477639 SOX12O15370 315 aa25.86■■□□□ 1.73
TMED4-204ENST00000477639 FLT4P35916 1363 aa25.85■■□□□ 1.73
TMED4-204ENST00000477639 FMN2Q9NZ56 1722 aa25.85■■□□□ 1.73
TMED4-204ENST00000477639 NGDNQ8NEJ9 315 aaKnown RBP25.84■■□□□ 1.73
TMED4-204ENST00000477639 KDRP35968 1356 aa25.83■■□□□ 1.73
TMED4-204ENST00000477639 RGPD8O14715 1765 aaPredicted RBP25.82■■□□□ 1.72
TMED4-204ENST00000477639 MTHFSDQ2M296 383 aaKnown RBP25.82■■□□□ 1.72
TMED4-204ENST00000477639 MSH6P52701 1360 aa25.82■■□□□ 1.72
TMED4-204ENST00000477639 DCTPP1Q9H773 170 aa25.82■■□□□ 1.72
TMED4-204ENST00000477639 PTPRCP08575 1304 aa25.81■■□□□ 1.72
TMED4-204ENST00000477639 PIK3C2AO00443 1686 aa25.81■■□□□ 1.72
TMED4-204ENST00000477639 FOXO3O43524 673 aa25.8■■□□□ 1.72
TMED4-204ENST00000477639 IGSF1Q8N6C5 1336 aa25.8■■□□□ 1.72
TMED4-204ENST00000477639 ANKARQ7Z5J8 1434 aa25.8■■□□□ 1.72
TMED4-204ENST00000477639 ANKRD44Q8N8A2 993 aa25.79■■□□□ 1.72
TMED4-204ENST00000477639 EYA1Q99502 592 aa25.79■■□□□ 1.72
TMED4-204ENST00000477639 ATP10DQ9P241 1426 aa25.78■■□□□ 1.72
TMED4-204ENST00000477639 AMPHP49418 695 aa25.77■■□□□ 1.72
TMED4-204ENST00000477639 SNX21Q969T3 373 aa25.76■■□□□ 1.72
TMED4-204ENST00000477639 TBC1D9Q6ZT07 1266 aa25.76■■□□□ 1.71
TMED4-204ENST00000477639 RPAP2Q8IXW5 612 aaPredicted RBP25.76■■□□□ 1.71
TMED4-204ENST00000477639 SPRYD3Q8NCJ5 442 aa25.76■■□□□ 1.71
TMED4-204ENST00000477639 MIS18AQ9NYP9 233 aa25.76■■□□□ 1.71
TMED4-204ENST00000477639 HSCBQ8IWL3 235 aa25.75■■□□□ 1.71
TMED4-204ENST00000477639 RTF1Q92541 710 aaKnown RBP25.75■■□□□ 1.71
TMED4-204ENST00000477639 NCOA3Q9Y6Q9 1424 aa25.75■■□□□ 1.71
TMED4-204ENST00000477639 PLEKHM2Q8IWE5 1019 aa25.75■■□□□ 1.71
TMED4-204ENST00000477639 RTL1A6NKG5 1358 aa25.74■■□□□ 1.71
TMED4-204ENST00000477639 SLC4A2P04920 1241 aa25.74■■□□□ 1.71
TMED4-204ENST00000477639 CEP85Q6P2H3 762 aa25.74■■□□□ 1.71
TMED4-204ENST00000477639 GAS2L2Q8NHY3 880 aa25.74■■□□□ 1.71
TMED4-204ENST00000477639 CHMP5Q9NZZ3 219 aa25.74■■□□□ 1.71
TMED4-204ENST00000477639 C19orf44Q9H6X5 657 aa25.73■■□□□ 1.71
TMED4-204ENST00000477639 TSPYL4Q9UJ04 414 aa25.73■■□□□ 1.71
TMED4-204ENST00000477639 NLRP6P59044 892 aa25.73■■□□□ 1.71
TMED4-204ENST00000477639 KIF2CQ99661 725 aa25.73■■□□□ 1.71
TMED4-204ENST00000477639 HTATSF1O43719 755 aaKnown RBP25.72■■□□□ 1.71
TMED4-204ENST00000477639 MARF1Q9Y4F3 1742 aaKnown RBP25.71■■□□□ 1.71
TMED4-204ENST00000477639 GSPT1P15170 499 aaKnown RBP25.71■■□□□ 1.71
TMED4-204ENST00000477639 USP54Q70EL1 1684 aa25.71■■□□□ 1.71
TMED4-204ENST00000477639 ATF3P18847 181 aa25.71■■□□□ 1.71
TMED4-204ENST00000477639 CDC45O75419 566 aa25.7■■□□□ 1.7
TMED4-204ENST00000477639 MEIS3Q99687 375 aa25.7■■□□□ 1.7
TMED4-204ENST00000477639 HOXC9P31274 260 aa25.69■■□□□ 1.7
TMED4-204ENST00000477639 HSPA1LP34931 641 aa25.69■■□□□ 1.7
TMED4-204ENST00000477639 DDIT3P35638 169 aa25.69■■□□□ 1.7
TMED4-204ENST00000477639 G2E3Q7L622 706 aa25.69■■□□□ 1.7
TMED4-204ENST00000477639 LRRC37A3O60309 1634 aa25.69■■□□□ 1.7
TMED4-204ENST00000477639 SLAIN2Q9P270 581 aa25.68■■□□□ 1.7
TMED4-204ENST00000477639 TTC22Q5TAA0 569 aa25.67■■□□□ 1.7
TMED4-204ENST00000477639 CADPS2Q86UW7 1296 aa25.67■■□□□ 1.7
TMED4-204ENST00000477639 C16orf71Q8IYS4 520 aaPredicted RBP25.67■■□□□ 1.7
TMED4-204ENST00000477639 IL27Q8NEV9 243 aa25.67■■□□□ 1.7
TMED4-204ENST00000477639 MCM4P33991 863 aa25.66■■□□□ 1.7
TMED4-204ENST00000477639 ADGRL3Q9HAR2 1447 aa25.66■■□□□ 1.7
TMED4-204ENST00000477639 ROBO1Q9Y6N7 1651 aa25.65■■□□□ 1.7
TMED4-204ENST00000477639 NUTM2GQ5VZR2 741 aa25.65■■□□□ 1.7
TMED4-204ENST00000477639 GNAT3A8MTJ3 354 aa25.64■■□□□ 1.7
TMED4-204ENST00000477639 CCT4P50991 539 aaKnown RBP25.64■■□□□ 1.7
TMED4-204ENST00000477639 ABTB2Q8N961 1025 aa25.62■■□□□ 1.69
TMED4-204ENST00000477639 OTUD7AQ8TE49 926 aaPredicted RBP25.62■■□□□ 1.69
TMED4-204ENST00000477639 BRPF3Q9ULD4 1205 aa25.62■■□□□ 1.69
TMED4-204ENST00000477639 F6X3S4 739 aa25.62■■□□□ 1.69
TMED4-204ENST00000477639 EIF5BO60841 1220 aaKnown RBP25.62■■□□□ 1.69
TMED4-204ENST00000477639 DCCP43146 1447 aa25.61■■□□□ 1.69
TMED4-204ENST00000477639 MAP3K5Q99683 1374 aa25.6■■□□□ 1.69
TMED4-204ENST00000477639 SMARCA5O60264 1052 aaPredicted RBP25.6■■□□□ 1.69
TMED4-204ENST00000477639 IL17REQ8NFR9 667 aa25.6■■□□□ 1.69
TMED4-204ENST00000477639 SLC4A10Q6U841 1118 aa25.59■■□□□ 1.69
TMED4-204ENST00000477639 STK31Q9BXU1 1019 aa25.59■■□□□ 1.69
TMED4-204ENST00000477639 BABAM1Q9NWV8 329 aa25.59■■□□□ 1.69
TMED4-204ENST00000477639 HMMRO75330 724 aa25.58■■□□□ 1.69
TMED4-204ENST00000477639 HSP90AB1P08238 724 aaKnown RBP25.58■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms