RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 RABEP1Q15276 862 aa18.79■□□□□ 0.6
CLSTN1-205ENST00000477264 ZSCAN23Q3MJ62 389 aa18.79■□□□□ 0.6
CLSTN1-205ENST00000477264 GAS2L2Q8NHY3 880 aa18.79■□□□□ 0.6
CLSTN1-205ENST00000477264 ALDH1L2Q3SY69 923 aa18.79■□□□□ 0.6
CLSTN1-205ENST00000477264 SSH1Q8WYL5 1049 aa18.79■□□□□ 0.6
CLSTN1-205ENST00000477264 PODXL2Q9NZ53 605 aa18.79■□□□□ 0.6
CLSTN1-205ENST00000477264 MTHFSP49914 203 aa18.78■□□□□ 0.6
CLSTN1-205ENST00000477264 HSPA2P54652 639 aa18.78■□□□□ 0.6
CLSTN1-205ENST00000477264 EXOSC9Q06265 439 aaKnown RBP18.78■□□□□ 0.6
CLSTN1-205ENST00000477264 TMEM57Q8N5G2 664 aa18.78■□□□□ 0.6
CLSTN1-205ENST00000477264 LNPKQ9C0E8 428 aa18.78■□□□□ 0.6
CLSTN1-205ENST00000477264 PRR36Q9H6K5 1346 aa18.78■□□□□ 0.6
CLSTN1-205ENST00000477264 NUTM2FA1L443 756 aa18.78■□□□□ 0.6
CLSTN1-205ENST00000477264 CYP2E1P05181 493 aaPredicted RBP18.78■□□□□ 0.6
CLSTN1-205ENST00000477264 ZNF428Q96B54 188 aa18.78■□□□□ 0.6
CLSTN1-205ENST00000477264 CWC22Q9HCG8 908 aaKnown RBP18.78■□□□□ 0.6
CLSTN1-205ENST00000477264 ITSN1Q15811 1721 aa18.77■□□□□ 0.6
CLSTN1-205ENST00000477264 CD2BP2O95400 341 aaKnown RBP18.77■□□□□ 0.6
CLSTN1-205ENST00000477264 CDC42BPGQ6DT37 1551 aa18.77■□□□□ 0.6
CLSTN1-205ENST00000477264 CDC45O75419 566 aa18.76■□□□□ 0.59
CLSTN1-205ENST00000477264 UTP14CQ5TAP6 766 aaKnown RBP18.76■□□□□ 0.59
CLSTN1-205ENST00000477264 TBC1D9Q6ZT07 1266 aa18.76■□□□□ 0.59
CLSTN1-205ENST00000477264 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.76■□□□□ 0.59
CLSTN1-205ENST00000477264 CPSF1Q10570 1443 aaKnown RBP18.76■□□□□ 0.59
CLSTN1-205ENST00000477264 BRPF1P55201 1214 aaPredicted RBP18.76■□□□□ 0.59
CLSTN1-205ENST00000477264 LMBRD1Q9NUN5 540 aa18.76■□□□□ 0.59
CLSTN1-205ENST00000477264 NOB1Q9ULX3 412 aaKnown RBP18.76■□□□□ 0.59
CLSTN1-205ENST00000477264 TOPAZ1Q8N9V7 1692 aa18.75■□□□□ 0.59
CLSTN1-205ENST00000477264 CAVIN1Q6NZI2 390 aaKnown RBP18.75■□□□□ 0.59
CLSTN1-205ENST00000477264 KIF20BQ96Q89 1820 aa18.75■□□□□ 0.59
CLSTN1-205ENST00000477264 LMTK3Q96Q04 1460 aa18.75■□□□□ 0.59
CLSTN1-205ENST00000477264 TNNT2P45379 298 aaPredicted RBP18.75■□□□□ 0.59
CLSTN1-205ENST00000477264 NWD1Q149M9 1564 aa18.74■□□□□ 0.59
CLSTN1-205ENST00000477264 COL3A1P02461 1466 aaPredicted RBP18.74■□□□□ 0.59
CLSTN1-205ENST00000477264 AKAP12Q02952 1782 aa18.74■□□□□ 0.59
CLSTN1-205ENST00000477264 U2AF1L5P0DN76 240 aaPredicted RBP18.74■□□□□ 0.59
CLSTN1-205ENST00000477264 U2AF1Q01081 240 aaKnown RBP eCLIP18.74■□□□□ 0.59
CLSTN1-205ENST00000477264 MCTP1Q6DN14 999 aa18.74■□□□□ 0.59
CLSTN1-205ENST00000477264 RBSNQ9H1K0 784 aa18.74■□□□□ 0.59
CLSTN1-205ENST00000477264 EDC4Q6P2E9 1401 aaKnown RBP18.74■□□□□ 0.59
CLSTN1-205ENST00000477264 FYB1O15117 783 aa18.74■□□□□ 0.59
CLSTN1-205ENST00000477264 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.74■□□□□ 0.59
CLSTN1-205ENST00000477264 NALCNQ8IZF0 1738 aa18.74■□□□□ 0.59
CLSTN1-205ENST00000477264 TSR2Q969E8 191 aaKnown RBP18.74■□□□□ 0.59
CLSTN1-205ENST00000477264 GGNBP2Q9H3C7 697 aa18.74■□□□□ 0.59
CLSTN1-205ENST00000477264 C14orf37Q86TY3 774 aa18.73■□□□□ 0.59
CLSTN1-205ENST00000477264 FOXD4L1Q9NU39 408 aa18.73■□□□□ 0.59
CLSTN1-205ENST00000477264 MON2Q7Z3U7 1717 aa18.73■□□□□ 0.59
CLSTN1-205ENST00000477264 XPCQ01831 940 aaPredicted RBP18.72■□□□□ 0.59
CLSTN1-205ENST00000477264 LRSAM1Q6UWE0 723 aa18.72■□□□□ 0.59
CLSTN1-205ENST00000477264 PLEKHG3A1L390 1219 aa18.72■□□□□ 0.59
CLSTN1-205ENST00000477264 FMN2Q9NZ56 1722 aa18.71■□□□□ 0.59
CLSTN1-205ENST00000477264 RGPD8O14715 1765 aaPredicted RBP18.71■□□□□ 0.59
CLSTN1-205ENST00000477264 TMPOP42166 694 aaKnown RBP18.71■□□□□ 0.59
CLSTN1-205ENST00000477264 CCDC94Q9BW85 323 aaPredicted RBP18.71■□□□□ 0.59
CLSTN1-205ENST00000477264 ANKARQ7Z5J8 1434 aa18.71■□□□□ 0.59
CLSTN1-205ENST00000477264 RBM33Q96EV2 1170 aaKnown RBP18.71■□□□□ 0.59
CLSTN1-205ENST00000477264 ACEP12821 1306 aa18.71■□□□□ 0.58
CLSTN1-205ENST00000477264 ADGRL3Q9HAR2 1447 aa18.7■□□□□ 0.58
CLSTN1-205ENST00000477264 MBD3O95983 291 aa18.7■□□□□ 0.58
CLSTN1-205ENST00000477264 PROSER2Q86WR7 435 aaPredicted RBP18.7■□□□□ 0.58
CLSTN1-205ENST00000477264 PLEKHF1Q96S99 279 aa18.69■□□□□ 0.58
CLSTN1-205ENST00000477264 NCLP19338 710 aaKnown RBP18.69■□□□□ 0.58
CLSTN1-205ENST00000477264 ANKRD45Q5TZF3 282 aa18.69■□□□□ 0.58
CLSTN1-205ENST00000477264 PRIM1P49642 420 aaKnown RBP18.68■□□□□ 0.58
CLSTN1-205ENST00000477264 TRIM35Q9UPQ4 493 aa18.68■□□□□ 0.58
CLSTN1-205ENST00000477264 DMTNQ08495 405 aa18.68■□□□□ 0.58
CLSTN1-205ENST00000477264 NGDNQ8NEJ9 315 aaKnown RBP18.68■□□□□ 0.58
CLSTN1-205ENST00000477264 ARHGAP45Q92619 1136 aa18.68■□□□□ 0.58
CLSTN1-205ENST00000477264 PRIMPOLQ96LW4 560 aa18.68■□□□□ 0.58
CLSTN1-205ENST00000477264 KIAA2012Q0VF49 1180 aa18.67■□□□□ 0.58
CLSTN1-205ENST00000477264 RBM42Q9BTD8 480 aaKnown RBP18.67■□□□□ 0.58
CLSTN1-205ENST00000477264 MYRIPQ8NFW9 859 aa18.66■□□□□ 0.58
CLSTN1-205ENST00000477264 STRCQ7RTU9 1775 aa18.66■□□□□ 0.58
CLSTN1-205ENST00000477264 HMGN5P82970 282 aaKnown RBP18.66■□□□□ 0.58
CLSTN1-205ENST00000477264 ST18O60284 1047 aa18.65■□□□□ 0.58
CLSTN1-205ENST00000477264 USP6P35125 1406 aa18.65■□□□□ 0.58
CLSTN1-205ENST00000477264 KIF24Q5T7B8 1368 aa18.64■□□□□ 0.58
CLSTN1-205ENST00000477264 NRKQ7Z2Y5 1582 aa18.64■□□□□ 0.57
CLSTN1-205ENST00000477264 NME9Q86XW9 330 aa18.64■□□□□ 0.57
CLSTN1-205ENST00000477264 COG3Q96JB2 828 aa18.64■□□□□ 0.57
CLSTN1-205ENST00000477264 ZBTB7BO15156 539 aaPredicted RBP18.63■□□□□ 0.57
CLSTN1-205ENST00000477264 GTF2F1P35269 517 aaKnown RBP eCLIP18.63■□□□□ 0.57
CLSTN1-205ENST00000477264 GPT2Q8TD30 523 aa18.63■□□□□ 0.57
CLSTN1-205ENST00000477264 SYAP1Q96A49 352 aaPredicted RBP18.63■□□□□ 0.57
CLSTN1-205ENST00000477264 TTC21BQ7Z4L5 1316 aa18.63■□□□□ 0.57
CLSTN1-205ENST00000477264 INTS3Q68E01 1043 aaKnown RBP18.62■□□□□ 0.57
CLSTN1-205ENST00000477264 GTPBP4Q9BZE4 634 aaKnown RBP18.62■□□□□ 0.57
CLSTN1-205ENST00000477264 STRCP1A6NGW2 1772 aa18.61■□□□□ 0.57
CLSTN1-205ENST00000477264 PRPF40AO75400 957 aaKnown RBP18.61■□□□□ 0.57
CLSTN1-205ENST00000477264 CASC1Q6TDU7 716 aa18.61■□□□□ 0.57
CLSTN1-205ENST00000477264 C19orf44Q9H6X5 657 aa18.61■□□□□ 0.57
CLSTN1-205ENST00000477264 ABCC4O15439 1325 aa18.6■□□□□ 0.57
CLSTN1-205ENST00000477264 PHF14O94880 888 aa18.6■□□□□ 0.57
CLSTN1-205ENST00000477264 USP26Q9BXU7 913 aa18.6■□□□□ 0.57
CLSTN1-205ENST00000477264 TMEM63CQ9P1W3 806 aa18.6■□□□□ 0.57
CLSTN1-205ENST00000477264 PHF8Q9UPP1 1060 aa18.6■□□□□ 0.57
CLSTN1-205ENST00000477264 TTC21AQ8NDW8 1320 aa18.6■□□□□ 0.57
CLSTN1-205ENST00000477264 LRRC7Q96NW7 1537 aa18.59■□□□□ 0.57
CLSTN1-205ENST00000477264 PTMAP06454 111 aaKnown RBP18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms