RNA–Protein interactions for RNA: ENST00000475464.1

PTP4A2-204, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 3

Gene PTP4A2, Length 366 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-204ENST00000475464 ANKRD36BQ8N2N9 1353 aa14.34□□□□□ -0.11
PTP4A2-204ENST00000475464 ST20-MTHFSA0A0A6YYL1 179 aa14.33□□□□□ -0.12
PTP4A2-204ENST00000475464 BTAF1O14981 1849 aa14.32□□□□□ -0.12
PTP4A2-204ENST00000475464 SLC24A1O60721 1099 aa14.32□□□□□ -0.12
PTP4A2-204ENST00000475464 GIGYF1O75420 1035 aaPredicted RBP14.32□□□□□ -0.12
PTP4A2-204ENST00000475464 NLGN2Q8NFZ4 835 aa14.32□□□□□ -0.12
PTP4A2-204ENST00000475464 PAPPAQ13219 1627 aa14.32□□□□□ -0.12
PTP4A2-204ENST00000475464 RRS1Q15050 365 aaKnown RBP14.31□□□□□ -0.12
PTP4A2-204ENST00000475464 USHBP1Q8N6Y0 703 aa14.31□□□□□ -0.12
PTP4A2-204ENST00000475464 RAPGEF4Q8WZA2 1011 aa14.31□□□□□ -0.12
PTP4A2-204ENST00000475464 TESK2Q96S53 571 aa14.31□□□□□ -0.12
PTP4A2-204ENST00000475464 LTN1O94822 1766 aa14.31□□□□□ -0.12
PTP4A2-204ENST00000475464 USP47Q96K76 1375 aa14.31□□□□□ -0.12
PTP4A2-204ENST00000475464 GRIN3BO60391 1043 aa14.3□□□□□ -0.12
PTP4A2-204ENST00000475464 NBPF6Q5VWK0 638 aa14.3□□□□□ -0.12
PTP4A2-204ENST00000475464 COL23A1Q86Y22 540 aaPredicted RBP14.3□□□□□ -0.12
PTP4A2-204ENST00000475464 NBPF4Q96M43 638 aa14.3□□□□□ -0.12
PTP4A2-204ENST00000475464 TATP17735 454 aaPredicted RBP14.29□□□□□ -0.12
PTP4A2-204ENST00000475464 MSL1Q68DK7 614 aa14.29□□□□□ -0.12
PTP4A2-204ENST00000475464 GGNBP2Q9H3C7 697 aa14.29□□□□□ -0.12
PTP4A2-204ENST00000475464 USP54Q70EL1 1684 aa14.29□□□□□ -0.12
PTP4A2-204ENST00000475464 NSD2O96028 1365 aa14.28□□□□□ -0.12
PTP4A2-204ENST00000475464 CGNL1Q0VF96 1302 aa14.28□□□□□ -0.12
PTP4A2-204ENST00000475464 FYB1O15117 783 aa14.27□□□□□ -0.13
PTP4A2-204ENST00000475464 HMGB2P26583 209 aaKnown RBP14.27□□□□□ -0.13
PTP4A2-204ENST00000475464 MEGF6O75095 1541 aa14.26□□□□□ -0.13
PTP4A2-204ENST00000475464 SMG6Q86US8 1419 aaKnown RBP14.26□□□□□ -0.13
PTP4A2-204ENST00000475464 YBX3P16989 372 aaKnown RBP eCLIP14.26□□□□□ -0.13
PTP4A2-204ENST00000475464 TMF1P82094 1093 aa14.26□□□□□ -0.13
PTP4A2-204ENST00000475464 MPRIPQ6WCQ1 1025 aa14.26□□□□□ -0.13
PTP4A2-204ENST00000475464 CHD4Q14839 1912 aa14.25□□□□□ -0.13
PTP4A2-204ENST00000475464 RTL1A6NKG5 1358 aa14.25□□□□□ -0.13
PTP4A2-204ENST00000475464 HSP90AB2PQ58FF8 381 aa14.25□□□□□ -0.13
PTP4A2-204ENST00000475464 FLAD1Q8NFF5 587 aa14.25□□□□□ -0.13
PTP4A2-204ENST00000475464 PCDH11XQ9BZA7 1347 aa14.24□□□□□ -0.13
PTP4A2-204ENST00000475464 PCDH11YQ9BZA8 1340 aa14.24□□□□□ -0.13
PTP4A2-204ENST00000475464 CD2APQ9Y5K6 639 aa14.23□□□□□ -0.13
PTP4A2-204ENST00000475464 PALLDQ8WX93 1383 aa14.22□□□□□ -0.13
PTP4A2-204ENST00000475464 SMARCC1Q92922 1105 aaPredicted RBP14.22□□□□□ -0.13
PTP4A2-204ENST00000475464 AK7Q96M32 723 aa14.22□□□□□ -0.13
PTP4A2-204ENST00000475464 FAM208AQ9UK61 1670 aaKnown RBP14.22□□□□□ -0.13
PTP4A2-204ENST00000475464 CEP350Q5VT06 3117 aa14.21□□□□□ -0.13
PTP4A2-204ENST00000475464 PPM1GO15355 546 aaPredicted RBP14.21□□□□□ -0.13
PTP4A2-204ENST00000475464 CYP27B1O15528 508 aa14.21□□□□□ -0.13
PTP4A2-204ENST00000475464 PHF14O94880 888 aa14.21□□□□□ -0.13
PTP4A2-204ENST00000475464 CDCA8Q53HL2 280 aa14.21□□□□□ -0.13
PTP4A2-204ENST00000475464 INSRP06213 1382 aa14.21□□□□□ -0.14
PTP4A2-204ENST00000475464 DOT1LQ8TEK3 1739 aa14.2□□□□□ -0.14
PTP4A2-204ENST00000475464 FLT4P35916 1363 aa14.2□□□□□ -0.14
PTP4A2-204ENST00000475464 GPBP1L1Q9HC44 474 aaPredicted RBP14.19□□□□□ -0.14
PTP4A2-204ENST00000475464 QSER1Q2KHR3 1735 aa14.18□□□□□ -0.14
PTP4A2-204ENST00000475464 SMIM5Q71RC9 77 aa14.18□□□□□ -0.14
PTP4A2-204ENST00000475464 ZNF526Q8TF50 670 aaPredicted RBP14.18□□□□□ -0.14
PTP4A2-204ENST00000475464 PIGBQ92521 554 aa14.18□□□□□ -0.14
PTP4A2-204ENST00000475464 WWC3Q9ULE0 1092 aa14.18□□□□□ -0.14
PTP4A2-204ENST00000475464 SPG7Q9UQ90 795 aa14.18□□□□□ -0.14
PTP4A2-204ENST00000475464 EMILIN1Q9Y6C2 1016 aa14.18□□□□□ -0.14
PTP4A2-204ENST00000475464 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.17□□□□□ -0.14
PTP4A2-204ENST00000475464 ATP10DQ9P241 1426 aa14.16□□□□□ -0.14
PTP4A2-204ENST00000475464 LY75O60449 1722 aa14.16□□□□□ -0.14
PTP4A2-204ENST00000475464 KIF24Q5T7B8 1368 aa14.16□□□□□ -0.14
PTP4A2-204ENST00000475464 RGPD2P0DJD1 1756 aa14.15□□□□□ -0.14
PTP4A2-204ENST00000475464 LOC102724428A0A0B4J2F2 783 aa14.15□□□□□ -0.14
PTP4A2-204ENST00000475464 SIK1P57059 783 aa14.15□□□□□ -0.14
PTP4A2-204ENST00000475464 AMIGO3Q86WK7 504 aa14.15□□□□□ -0.14
PTP4A2-204ENST00000475464 CARD14Q9BXL6 1004 aa14.15□□□□□ -0.14
PTP4A2-204ENST00000475464 TMOD3Q9NYL9 352 aa14.15□□□□□ -0.14
PTP4A2-204ENST00000475464 TUBGCP6Q96RT7 1819 aa14.15□□□□□ -0.14
PTP4A2-204ENST00000475464 IGSF1Q8N6C5 1336 aa14.15□□□□□ -0.15
PTP4A2-204ENST00000475464 SSFA2P28290 1259 aa14.14□□□□□ -0.15
PTP4A2-204ENST00000475464 NKX1-1Q15270 411 aaPredicted RBP14.14□□□□□ -0.15
PTP4A2-204ENST00000475464 COL24A1Q17RW2 1714 aa14.14□□□□□ -0.15
PTP4A2-204ENST00000475464 SHANK3Q9BYB0 1731 aa14.13□□□□□ -0.15
PTP4A2-204ENST00000475464 GNPATO15228 680 aa14.13□□□□□ -0.15
PTP4A2-204ENST00000475464 ATP6V1AP38606 617 aa14.13□□□□□ -0.15
PTP4A2-204ENST00000475464 LINC00116Q8NCU8 138 aa14.13□□□□□ -0.15
PTP4A2-204ENST00000475464 IFFO2Q5TF58 517 aa14.12□□□□□ -0.15
PTP4A2-204ENST00000475464 EYA1Q99502 592 aa14.12□□□□□ -0.15
PTP4A2-204ENST00000475464 ASAP1Q9ULH1 1129 aa14.12□□□□□ -0.15
PTP4A2-204ENST00000475464 NSD3Q9BZ95 1437 aa14.12□□□□□ -0.15
PTP4A2-204ENST00000475464 IFNL2Q8IZJ0 200 aa14.11□□□□□ -0.15
PTP4A2-204ENST00000475464 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.11□□□□□ -0.15
PTP4A2-204ENST00000475464 WASHC2AQ641Q2 1341 aa14.11□□□□□ -0.15
PTP4A2-204ENST00000475464 PHKG2P15735 406 aa14.1□□□□□ -0.15
PTP4A2-204ENST00000475464 HSPA6P17066 643 aa14.1□□□□□ -0.15
PTP4A2-204ENST00000475464 ITPK1Q13572 414 aa14.1□□□□□ -0.15
PTP4A2-204ENST00000475464 POLR3GLQ9BT43 218 aa14.1□□□□□ -0.15
PTP4A2-204ENST00000475464 C5P01031 1676 aa14.1□□□□□ -0.15
PTP4A2-204ENST00000475464 MMP10P09238 476 aa14.09□□□□□ -0.15
PTP4A2-204ENST00000475464 TNNT2P45379 298 aaPredicted RBP14.09□□□□□ -0.15
PTP4A2-204ENST00000475464 ATG3Q9NT62 314 aa14.09□□□□□ -0.15
PTP4A2-204ENST00000475464 TRAPPC3LQ5T215 181 aa14.08□□□□□ -0.16
PTP4A2-204ENST00000475464 RBM42Q9BTD8 480 aaKnown RBP14.08□□□□□ -0.16
PTP4A2-204ENST00000475464 POLKQ9UBT6 870 aa14.08□□□□□ -0.16
PTP4A2-204ENST00000475464 RTCBQ9Y3I0 505 aaKnown RBP14.08□□□□□ -0.16
PTP4A2-204ENST00000475464 C4BP0C0L5 1744 aa14.07□□□□□ -0.16
PTP4A2-204ENST00000475464 ADCY9O60503 1353 aa14.07□□□□□ -0.16
PTP4A2-204ENST00000475464 EIF4A2Q14240 407 aaKnown RBP14.06□□□□□ -0.16
PTP4A2-204ENST00000475464 NLGN1Q8N2Q7 840 aa14.06□□□□□ -0.16
PTP4A2-204ENST00000475464 BCS1LQ9Y276 419 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms