RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 CT47B1P0C2W7 299 aaPredicted RBP17.81■□□□□ 0.44
TRAF4-210ENST00000475329 RTF1Q92541 710 aaKnown RBP17.81■□□□□ 0.44
TRAF4-210ENST00000475329 COL5A2P05997 1499 aaPredicted RBP17.81■□□□□ 0.44
TRAF4-210ENST00000475329 FAM83GA6ND36 823 aa17.8■□□□□ 0.44
TRAF4-210ENST00000475329 CSB-PGBD3P0DP91 1061 aa17.8■□□□□ 0.44
TRAF4-210ENST00000475329 PLEKHG2Q9H7P9 1386 aa17.79■□□□□ 0.44
TRAF4-210ENST00000475329 DCTN1Q14203 1278 aa17.79■□□□□ 0.44
TRAF4-210ENST00000475329 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.79■□□□□ 0.44
TRAF4-210ENST00000475329 NLRP2Q9NX02 1062 aa17.79■□□□□ 0.44
TRAF4-210ENST00000475329 LAS1LQ9Y4W2 734 aaKnown RBP17.79■□□□□ 0.44
TRAF4-210ENST00000475329 PLCH1Q4KWH8 1693 aa17.79■□□□□ 0.44
TRAF4-210ENST00000475329 GNAT3A8MTJ3 354 aa17.78■□□□□ 0.44
TRAF4-210ENST00000475329 ZNF853P0CG23 659 aa17.78■□□□□ 0.44
TRAF4-210ENST00000475329 EXOSC9Q06265 439 aaKnown RBP17.78■□□□□ 0.44
TRAF4-210ENST00000475329 CFAP44Q96MT7 982 aa17.78■□□□□ 0.44
TRAF4-210ENST00000475329 CRB1P82279 1406 aa17.78■□□□□ 0.44
TRAF4-210ENST00000475329 PIP4K2BP78356 416 aa17.77■□□□□ 0.44
TRAF4-210ENST00000475329 AMOTQ4VCS5 1084 aa17.77■□□□□ 0.44
TRAF4-210ENST00000475329 PLEKHO1Q53GL0 409 aaPredicted RBP17.77■□□□□ 0.44
TRAF4-210ENST00000475329 MCM10Q7L590 875 aa17.77■□□□□ 0.44
TRAF4-210ENST00000475329 ADAMTS7Q9UKP4 1686 aa17.77■□□□□ 0.43
TRAF4-210ENST00000475329 SCN11AQ9UI33 1791 aa17.76■□□□□ 0.43
TRAF4-210ENST00000475329 WDR17Q8IZU2 1322 aa17.75■□□□□ 0.43
TRAF4-210ENST00000475329 RAPGEF4Q8WZA2 1011 aa17.75■□□□□ 0.43
TRAF4-210ENST00000475329 MBIPQ9NS73 344 aa17.75■□□□□ 0.43
TRAF4-210ENST00000475329 MEGF6O75095 1541 aa17.75■□□□□ 0.43
TRAF4-210ENST00000475329 SIPA1L3O60292 1781 aaPredicted RBP17.75■□□□□ 0.43
TRAF4-210ENST00000475329 WNK3Q9BYP7 1800 aa17.75■□□□□ 0.43
TRAF4-210ENST00000475329 OVOS2A0A0G2JMS6 1433 aa17.74■□□□□ 0.43
TRAF4-210ENST00000475329 KDM3BQ7LBC6 1761 aa17.74■□□□□ 0.43
TRAF4-210ENST00000475329 RARSP54136 660 aaKnown RBP17.74■□□□□ 0.43
TRAF4-210ENST00000475329 ZNF530Q6P9A1 599 aaPredicted RBP17.74■□□□□ 0.43
TRAF4-210ENST00000475329 NRAPQ86VF7 1730 aa17.73■□□□□ 0.43
TRAF4-210ENST00000475329 PLIN1O60240 522 aa17.73■□□□□ 0.43
TRAF4-210ENST00000475329 TATP17735 454 aaPredicted RBP17.73■□□□□ 0.43
TRAF4-210ENST00000475329 BCAR3O75815 825 aa17.72■□□□□ 0.43
TRAF4-210ENST00000475329 AKAP4Q5JQC9 854 aa17.72■□□□□ 0.43
TRAF4-210ENST00000475329 C1orf141Q5JVX7 400 aa17.72■□□□□ 0.43
TRAF4-210ENST00000475329 PPP4R2Q9NY27 417 aa17.72■□□□□ 0.43
TRAF4-210ENST00000475329 NWD2Q9ULI1 1742 aa17.72■□□□□ 0.43
TRAF4-210ENST00000475329 CHL1O00533 1208 aa17.71■□□□□ 0.43
TRAF4-210ENST00000475329 ZNF428Q96B54 188 aa17.71■□□□□ 0.43
TRAF4-210ENST00000475329 SHANK3Q9BYB0 1731 aa17.71■□□□□ 0.43
TRAF4-210ENST00000475329 CEMIPQ8WUJ3 1361 aa17.7■□□□□ 0.42
TRAF4-210ENST00000475329 CANXP27824 592 aaKnown RBP17.7■□□□□ 0.42
TRAF4-210ENST00000475329 TOM1L2Q6ZVM7 507 aa17.7■□□□□ 0.42
TRAF4-210ENST00000475329 EVA1CP58658 441 aa17.69■□□□□ 0.42
TRAF4-210ENST00000475329 IL17REQ8NFR9 667 aa17.69■□□□□ 0.42
TRAF4-210ENST00000475329 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.69■□□□□ 0.423e-6■□□□□ 10.9
TRAF4-210ENST00000475329 SPG7Q9UQ90 795 aa17.69■□□□□ 0.42
TRAF4-210ENST00000475329 ALDH1L2Q3SY69 923 aa17.68■□□□□ 0.42
TRAF4-210ENST00000475329 CARD10Q9BWT7 1032 aa17.68■□□□□ 0.42
TRAF4-210ENST00000475329 STRN4Q9NRL3 753 aa17.68■□□□□ 0.42
TRAF4-210ENST00000475329 SMC4Q9NTJ3 1288 aa17.68■□□□□ 0.42
TRAF4-210ENST00000475329 BABAM1Q9NWV8 329 aa17.68■□□□□ 0.42
TRAF4-210ENST00000475329 TSPYL4Q9UJ04 414 aa17.68■□□□□ 0.42
TRAF4-210ENST00000475329 CACNA1FO60840 1977 aa17.68■□□□□ 0.42
TRAF4-210ENST00000475329 TWISTNBQ3B726 338 aaPredicted RBP17.67■□□□□ 0.42
TRAF4-210ENST00000475329 HSPA1LP34931 641 aa17.66■□□□□ 0.42
TRAF4-210ENST00000475329 EXOC6Q8TAG9 804 aa17.66■□□□□ 0.42
TRAF4-210ENST00000475329 BCL2L13Q9BXK5 485 aa17.66■□□□□ 0.42
TRAF4-210ENST00000475329 BTG4Q9NY30 223 aa17.66■□□□□ 0.42
TRAF4-210ENST00000475329 VAMP4O75379 141 aa17.65■□□□□ 0.42
TRAF4-210ENST00000475329 PDE3AQ14432 1141 aa17.65■□□□□ 0.42
TRAF4-210ENST00000475329 TAF7Q15545 349 aaPredicted RBP17.65■□□□□ 0.42
TRAF4-210ENST00000475329 C20orf194Q5TEA3 1177 aa17.65■□□□□ 0.42
TRAF4-210ENST00000475329 LARP1Q6PKG0 1096 aaKnown RBP17.65■□□□□ 0.42
TRAF4-210ENST00000475329 TSPYL6Q8N831 410 aa17.65■□□□□ 0.42
TRAF4-210ENST00000475329 C8orf58Q8NAV2 365 aa17.65■□□□□ 0.42
TRAF4-210ENST00000475329 SSH1Q8WYL5 1049 aa17.65■□□□□ 0.42
TRAF4-210ENST00000475329 CRBNQ96SW2 442 aa17.65■□□□□ 0.42
TRAF4-210ENST00000475329 KIF16BQ96L93 1317 aa17.65■□□□□ 0.42
TRAF4-210ENST00000475329 JCADQ9P266 1359 aa17.65■□□□□ 0.42
TRAF4-210ENST00000475329 RNMTO43148 476 aaKnown RBP17.64■□□□□ 0.41
TRAF4-210ENST00000475329 FRAT1Q92837 279 aaPredicted RBP17.64■□□□□ 0.41
TRAF4-210ENST00000475329 MRC1P22897 1456 aa17.63■□□□□ 0.41
TRAF4-210ENST00000475329 TEFQ10587 303 aa17.63■□□□□ 0.41
TRAF4-210ENST00000475329 MPRIPQ6WCQ1 1025 aa17.63■□□□□ 0.41
TRAF4-210ENST00000475329 LGR6Q9HBX8 967 aa17.63■□□□□ 0.41
TRAF4-210ENST00000475329 IL2RBP14784 551 aa17.62■□□□□ 0.41
TRAF4-210ENST00000475329 PHKG2P15735 406 aa17.62■□□□□ 0.41
TRAF4-210ENST00000475329 ZKSCAN2Q63HK3 967 aa17.62■□□□□ 0.41
TRAF4-210ENST00000475329 IFNL2Q8IZJ0 200 aa17.62■□□□□ 0.41
TRAF4-210ENST00000475329 MIS18AQ9NYP9 233 aa17.62■□□□□ 0.41
TRAF4-210ENST00000475329 KDM6AO15550 1401 aaPredicted RBP17.62■□□□□ 0.41
TRAF4-210ENST00000475329 NUTM2BA6NNL0 878 aaPredicted RBP17.61■□□□□ 0.41
TRAF4-210ENST00000475329 NUTM2EB1AL46 878 aaPredicted RBP17.61■□□□□ 0.41
TRAF4-210ENST00000475329 ELL2O00472 640 aaPredicted RBP17.61■□□□□ 0.41
TRAF4-210ENST00000475329 ADAMTS2O95450 1211 aa17.61■□□□□ 0.41
TRAF4-210ENST00000475329 MS4A1P11836 297 aa17.61■□□□□ 0.41
TRAF4-210ENST00000475329 BRPF1P55201 1214 aaPredicted RBP17.61■□□□□ 0.41
TRAF4-210ENST00000475329 NUTM2AQ8IVF1 878 aaPredicted RBP17.61■□□□□ 0.41
TRAF4-210ENST00000475329 PCDH11XQ9BZA7 1347 aa17.61■□□□□ 0.41
TRAF4-210ENST00000475329 PCDH11YQ9BZA8 1340 aa17.61■□□□□ 0.41
TRAF4-210ENST00000475329 HSP90AB1P08238 724 aaKnown RBP17.6■□□□□ 0.41
TRAF4-210ENST00000475329 SOS1Q07889 1333 aaPredicted RBP17.6■□□□□ 0.41
TRAF4-210ENST00000475329 SOCS7O14512 581 aa17.59■□□□□ 0.41
TRAF4-210ENST00000475329 IPO8O15397 1037 aaKnown RBP17.59■□□□□ 0.41
TRAF4-210ENST00000475329 KRT24Q2M2I5 525 aa17.59■□□□□ 0.41
TRAF4-210ENST00000475329 MRPL50Q8N5N7 158 aaKnown RBP17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms