RNA–Protein interactions for RNA: ENST00000474319.1

LSS-208, Transcript of lanosterol synthase, humanhuman

TSL 2

Gene LSS, Length 3,601 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-208ENST00000474319 HSP90AA2PQ14568 343 aaPredicted RBP13.24□□□□□ -0.29
LSS-208ENST00000474319 CT47B1P0C2W7 299 aaPredicted RBP13.24□□□□□ -0.29
LSS-208ENST00000474319 PLEKHM2Q8IWE5 1019 aa13.24□□□□□ -0.29
LSS-208ENST00000474319 GDPD2Q9HCC8 539 aa13.24□□□□□ -0.29
LSS-208ENST00000474319 ABCC11Q96J66 1382 aa13.23□□□□□ -0.29
LSS-208ENST00000474319 PREX1Q8TCU6 1659 aa13.23□□□□□ -0.29
LSS-208ENST00000474319 TRIM6-TRIM34B2RNG4 842 aa13.23□□□□□ -0.29
LSS-208ENST00000474319 SLC4A2P04920 1241 aa13.23□□□□□ -0.29
LSS-208ENST00000474319 QRICH2Q9H0J4 1663 aa13.23□□□□□ -0.29
LSS-208ENST00000474319 CALD1Q05682 793 aaKnown RBP13.23□□□□□ -0.29
LSS-208ENST00000474319 GCC1Q96CN9 775 aa13.23□□□□□ -0.29
LSS-208ENST00000474319 ORAI2Q96SN7 254 aa13.22□□□□□ -0.29
LSS-208ENST00000474319 SDSP20132 328 aa13.22□□□□□ -0.29
LSS-208ENST00000474319 ALDH1L2Q3SY69 923 aa13.22□□□□□ -0.29
LSS-208ENST00000474319 HSP90AB2PQ58FF8 381 aa13.22□□□□□ -0.29
LSS-208ENST00000474319 USHBP1Q8N6Y0 703 aa13.22□□□□□ -0.29
LSS-208ENST00000474319 PLCB2Q00722 1185 aa13.21□□□□□ -0.29
LSS-208ENST00000474319 G2E3Q7L622 706 aa13.21□□□□□ -0.29
LSS-208ENST00000474319 UPF3BQ9BZI7 483 aaKnown RBP13.21□□□□□ -0.29
LSS-208ENST00000474319 ALKQ9UM73 1620 aa13.21□□□□□ -0.29
LSS-208ENST00000474319 CLCN1P35523 988 aa13.21□□□□□ -0.3
LSS-208ENST00000474319 NEK4P51957 841 aa13.21□□□□□ -0.3
LSS-208ENST00000474319 AK9Q5TCS8 1911 aa13.2□□□□□ -0.3
LSS-208ENST00000474319 HAP1P54257 671 aaPredicted RBP13.2□□□□□ -0.3
LSS-208ENST00000474319 NCBP3Q53F19 620 aaKnown RBP13.2□□□□□ -0.3
LSS-208ENST00000474319 API5Q9BZZ5 524 aaKnown RBP13.2□□□□□ -0.3
LSS-208ENST00000474319 ADGRB1O14514 1584 aa13.19□□□□□ -0.3
LSS-208ENST00000474319 SYCE3A1L190 88 aa13.19□□□□□ -0.3
LSS-208ENST00000474319 UBE2Q2Q8WVN8 375 aa13.19□□□□□ -0.3
LSS-208ENST00000474319 SNX21Q969T3 373 aa13.19□□□□□ -0.3
LSS-208ENST00000474319 MSNP26038 577 aaKnown RBP13.19□□□□□ -0.3
LSS-208ENST00000474319 ANO2Q9NQ90 1003 aa13.19□□□□□ -0.3
LSS-208ENST00000474319 IL13P35225 146 aa13.19□□□□□ -0.3
LSS-208ENST00000474319 ZC3H6P61129 1189 aaKnown RBP13.19□□□□□ -0.3
LSS-208ENST00000474319 DDX54Q8TDD1 881 aaKnown RBP13.19□□□□□ -0.3
LSS-208ENST00000474319 IL1RAPL2Q9NP60 686 aa13.19□□□□□ -0.3
LSS-208ENST00000474319 NSFL1CQ9UNZ2 370 aaKnown RBP13.19□□□□□ -0.3
LSS-208ENST00000474319 TBX22Q9Y458 520 aa13.19□□□□□ -0.3
LSS-208ENST00000474319 TMEM131LA2VDJ0 1609 aa13.18□□□□□ -0.3
LSS-208ENST00000474319 A0A0G2JS52 829 aa13.18□□□□□ -0.3
LSS-208ENST00000474319 TTC22Q5TAA0 569 aa13.18□□□□□ -0.3
LSS-208ENST00000474319 R3HCC1Q9Y3T6 440 aaKnown RBP13.18□□□□□ -0.3
LSS-208ENST00000474319 AGLP35573 1532 aa13.18□□□□□ -0.3
LSS-208ENST00000474319 NSD2O96028 1365 aa13.18□□□□□ -0.3
LSS-208ENST00000474319 IL16Q14005 1332 aa13.18□□□□□ -0.3
LSS-208ENST00000474319 KIAA1211Q6ZU35 1233 aa13.18□□□□□ -0.3
LSS-208ENST00000474319 CFAP44Q96MT7 982 aa13.18□□□□□ -0.3
LSS-208ENST00000474319 PRIM1P49642 420 aaKnown RBP13.18□□□□□ -0.3
LSS-208ENST00000474319 IFT57Q9NWB7 429 aa13.18□□□□□ -0.3
LSS-208ENST00000474319 CASC1Q6TDU7 716 aa13.17□□□□□ -0.3
LSS-208ENST00000474319 CABLES1Q8TDN4 633 aa13.17□□□□□ -0.3
LSS-208ENST00000474319 FAM13BQ9NYF5 915 aa13.17□□□□□ -0.3
LSS-208ENST00000474319 PTPRMP28827 1452 aa13.17□□□□□ -0.3
LSS-208ENST00000474319 TTC21BQ7Z4L5 1316 aa13.17□□□□□ -0.3
LSS-208ENST00000474319 INTS3Q68E01 1043 aaKnown RBP13.17□□□□□ -0.3
LSS-208ENST00000474319 RBSNQ9H1K0 784 aa13.17□□□□□ -0.3
LSS-208ENST00000474319 NRXN1Q9ULB1 1477 aa13.16□□□□□ -0.3
LSS-208ENST00000474319 PTMAP06454 111 aaKnown RBP13.16□□□□□ -0.3
LSS-208ENST00000474319 DDIT3P35638 169 aa13.16□□□□□ -0.3
LSS-208ENST00000474319 ZSCAN23Q3MJ62 389 aa13.16□□□□□ -0.3
LSS-208ENST00000474319 USP26Q9BXU7 913 aa13.16□□□□□ -0.3
LSS-208ENST00000474319 TSPYL4Q9UJ04 414 aa13.16□□□□□ -0.3
LSS-208ENST00000474319 PHF8Q9UPP1 1060 aa13.16□□□□□ -0.3
LSS-208ENST00000474319 ATF3P18847 181 aa13.15□□□□□ -0.3
LSS-208ENST00000474319 CEP85Q6P2H3 762 aa13.15□□□□□ -0.3
LSS-208ENST00000474319 MSH6P52701 1360 aa13.15□□□□□ -0.3
LSS-208ENST00000474319 ST18O60284 1047 aa13.15□□□□□ -0.3
LSS-208ENST00000474319 FKBP5Q13451 457 aaPredicted RBP13.15□□□□□ -0.3
LSS-208ENST00000474319 PPLO60437 1756 aa13.15□□□□□ -0.3
LSS-208ENST00000474319 A0A0U1RQG5 324 aaPredicted RBP13.15□□□□□ -0.3
LSS-208ENST00000474319 SKOR2Q2VWA4 1001 aaPredicted RBP13.15□□□□□ -0.3
LSS-208ENST00000474319 EIF4A2Q14240 407 aaKnown RBP13.14□□□□□ -0.31
LSS-208ENST00000474319 RABEP1Q15276 862 aa13.14□□□□□ -0.31
LSS-208ENST00000474319 BCL11BQ9C0K0 894 aaPredicted RBP13.14□□□□□ -0.31
LSS-208ENST00000474319 RTF1Q92541 710 aaKnown RBP13.14□□□□□ -0.31
LSS-208ENST00000474319 DCTPP1Q9H773 170 aa13.14□□□□□ -0.31
LSS-208ENST00000474319 CIZ1Q9ULV3 898 aaPredicted RBP13.14□□□□□ -0.31
LSS-208ENST00000474319 LRRC7Q96NW7 1537 aa13.14□□□□□ -0.31
LSS-208ENST00000474319 NUTM1Q86Y26 1132 aa13.14□□□□□ -0.31
LSS-208ENST00000474319 CHMP3Q9Y3E7 222 aa13.14□□□□□ -0.31
LSS-208ENST00000474319 ZFYVE9O95405 1425 aa13.14□□□□□ -0.31
LSS-208ENST00000474319 ABCC4O15439 1325 aa13.14□□□□□ -0.31
LSS-208ENST00000474319 EIF2S2P20042 333 aaKnown RBP13.13□□□□□ -0.31
LSS-208ENST00000474319 CHMP4BQ9H444 224 aaKnown RBP13.13□□□□□ -0.31
LSS-208ENST00000474319 PALD1Q9ULE6 856 aa13.13□□□□□ -0.31
LSS-208ENST00000474319 KIAA1210Q9ULL0 1709 aa13.13□□□□□ -0.31
LSS-208ENST00000474319 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.13□□□□□ -0.31
LSS-208ENST00000474319 GPT2Q8TD30 523 aa13.13□□□□□ -0.31
LSS-208ENST00000474319 ADAMTS13Q76LX8 1427 aa13.13□□□□□ -0.31
LSS-208ENST00000474319 PTPRUQ92729 1446 aa13.13□□□□□ -0.31
LSS-208ENST00000474319 ZNF830Q96NB3 372 aaPredicted RBP13.12□□□□□ -0.31
LSS-208ENST00000474319 PLEKHG1Q9ULL1 1385 aa13.12□□□□□ -0.31
LSS-208ENST00000474319 ANXA1P04083 346 aa13.12□□□□□ -0.31
LSS-208ENST00000474319 CSB-PGBD3P0DP91 1061 aa13.12□□□□□ -0.31
LSS-208ENST00000474319 VIRMAQ69YN4 1812 aaKnown RBP13.12□□□□□ -0.31
LSS-208ENST00000474319 LMOD3Q0VAK6 560 aa13.12□□□□□ -0.31
LSS-208ENST00000474319 DNTTIP2Q5QJE6 756 aaKnown RBP13.12□□□□□ -0.31
LSS-208ENST00000474319 IFT172Q9UG01 1749 aa13.11□□□□□ -0.31
LSS-208ENST00000474319 KLHL40Q2TBA0 621 aa13.11□□□□□ -0.31
LSS-208ENST00000474319 ANKRD44Q8N8A2 993 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms