RNA–Protein interactions for RNA: ENST00000474305.2

CASP9-209, Transcript of caspase 9, humanhuman

TSL 1 (best)

Gene CASP9, Length 1,111 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP9-209ENST00000474305 FAM196AQ6ZSG2 479 aa24.84■■□□□ 1.57
CASP9-209ENST00000474305 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.84■■□□□ 1.57
CASP9-209ENST00000474305 EP400Q96L91 3159 aa24.83■■□□□ 1.57
CASP9-209ENST00000474305 FAM182BQ5T319 152 aa24.83■■□□□ 1.57
CASP9-209ENST00000474305 NUDCQ9Y266 331 aa24.83■■□□□ 1.57
CASP9-209ENST00000474305 AEBP1Q8IUX7 1158 aa24.82■■□□□ 1.56
CASP9-209ENST00000474305 BCL9O00512 1426 aa24.81■■□□□ 1.56
CASP9-209ENST00000474305 ANP32CO43423 234 aa24.8■■□□□ 1.56
CASP9-209ENST00000474305 UPF1Q92900 1129 aaKnown RBP eCLIP24.8■■□□□ 1.56
CASP9-209ENST00000474305 U2SURPO15042 1029 aaKnown RBP24.79■■□□□ 1.56
CASP9-209ENST00000474305 SHANK3Q9BYB0 1731 aa24.78■■□□□ 1.56
CASP9-209ENST00000474305 DDX54Q8TDD1 881 aaKnown RBP24.78■■□□□ 1.56
CASP9-209ENST00000474305 SPG7Q9UQ90 795 aa24.78■■□□□ 1.56
CASP9-209ENST00000474305 PKD1L3Q7Z443 1732 aa24.78■■□□□ 1.56
CASP9-209ENST00000474305 HMOX1P09601 288 aa24.77■■□□□ 1.56
CASP9-209ENST00000474305 CCDC125Q86Z20 511 aa24.77■■□□□ 1.56
CASP9-209ENST00000474305 AMOTQ4VCS5 1084 aa24.75■■□□□ 1.55
CASP9-209ENST00000474305 PLEKHO1Q53GL0 409 aaPredicted RBP24.75■■□□□ 1.55
CASP9-209ENST00000474305 PCDH11XQ9BZA7 1347 aa24.75■■□□□ 1.55
CASP9-209ENST00000474305 PCDH11YQ9BZA8 1340 aa24.75■■□□□ 1.55
CASP9-209ENST00000474305 CYP27B1O15528 508 aa24.74■■□□□ 1.55
CASP9-209ENST00000474305 SBF2Q86WG5 1849 aa24.74■■□□□ 1.55
CASP9-209ENST00000474305 FCHSD2O94868 740 aa24.73■■□□□ 1.55
CASP9-209ENST00000474305 U2AF1L5P0DN76 240 aaPredicted RBP24.73■■□□□ 1.55
CASP9-209ENST00000474305 U2AF1Q01081 240 aaKnown RBP eCLIP24.73■■□□□ 1.55
CASP9-209ENST00000474305 RSPH6AQ9H0K4 717 aa24.72■■□□□ 1.55
CASP9-209ENST00000474305 KAT6BQ8WYB5 2073 aa24.72■■□□□ 1.55
CASP9-209ENST00000474305 NKX1-1Q15270 411 aaPredicted RBP24.71■■□□□ 1.55
CASP9-209ENST00000474305 IFNL2Q8IZJ0 200 aa24.7■■□□□ 1.54
CASP9-209ENST00000474305 TRIM37O94972 964 aa24.69■■□□□ 1.54
CASP9-209ENST00000474305 PHKG2P15735 406 aa24.69■■□□□ 1.54
CASP9-209ENST00000474305 BCL11BQ9C0K0 894 aaPredicted RBP24.68■■□□□ 1.54
CASP9-209ENST00000474305 PRKAR2BP31323 418 aa24.66■■□□□ 1.54
CASP9-209ENST00000474305 MTHFSDQ2M296 383 aaKnown RBP24.65■■□□□ 1.54
CASP9-209ENST00000474305 ZNF530Q6P9A1 599 aaPredicted RBP24.65■■□□□ 1.54
CASP9-209ENST00000474305 KCNQ2O43526 872 aa24.64■■□□□ 1.54
CASP9-209ENST00000474305 HSP90AB1P08238 724 aaKnown RBP24.64■■□□□ 1.54
CASP9-209ENST00000474305 SF3B2Q13435 895 aaKnown RBP24.64■■□□□ 1.54
CASP9-209ENST00000474305 PHACTR3Q96KR7 559 aa24.64■■□□□ 1.54
CASP9-209ENST00000474305 PNNQ9H307 717 aaKnown RBP24.64■■□□□ 1.54
CASP9-209ENST00000474305 CCDC184Q52MB2 194 aa24.63■■□□□ 1.53
CASP9-209ENST00000474305 ACSBG1Q96GR2 724 aa24.63■■□□□ 1.53
CASP9-209ENST00000474305 PLEKHF1Q96S99 279 aa24.63■■□□□ 1.53
CASP9-209ENST00000474305 TNS1Q9HBL0 1735 aaKnown RBP24.62■■□□□ 1.53
CASP9-209ENST00000474305 AKAP4Q5JQC9 854 aa24.62■■□□□ 1.53
CASP9-209ENST00000474305 C1orf141Q5JVX7 400 aa24.62■■□□□ 1.53
CASP9-209ENST00000474305 PTF1AQ7RTS3 328 aa24.62■■□□□ 1.53
CASP9-209ENST00000474305 NHSQ6T4R5 1651 aa24.62■■□□□ 1.53
CASP9-209ENST00000474305 PRIM1P49642 420 aaKnown RBP24.61■■□□□ 1.53
CASP9-209ENST00000474305 GAS2L2Q8NHY3 880 aa24.61■■□□□ 1.53
CASP9-209ENST00000474305 DCAF5Q96JK2 942 aa24.61■■□□□ 1.53
CASP9-209ENST00000474305 APBA3O96018 575 aa24.59■■□□□ 1.53
CASP9-209ENST00000474305 WDR43Q15061 677 aaKnown RBP eCLIP24.59■■□□□ 1.53
CASP9-209ENST00000474305 DIEXFQ68CQ4 756 aaKnown RBP24.59■■□□□ 1.53
CASP9-209ENST00000474305 ADAMTS8Q9UP79 889 aa24.59■■□□□ 1.53
CASP9-209ENST00000474305 DOT1LQ8TEK3 1739 aa24.58■■□□□ 1.53
CASP9-209ENST00000474305 PLSCR1O15162 318 aa24.58■■□□□ 1.53
CASP9-209ENST00000474305 BAG6P46379 1132 aa24.58■■□□□ 1.53
CASP9-209ENST00000474305 ITGB4P16144 1822 aa24.57■■□□□ 1.52
CASP9-209ENST00000474305 ERVV-2B6SEH9 535 aa24.57■■□□□ 1.52
CASP9-209ENST00000474305 TOGARAM1Q9Y4F4 1720 aa24.56■■□□□ 1.52
CASP9-209ENST00000474305 NEFMP07197 916 aa24.56■■□□□ 1.52
CASP9-209ENST00000474305 DEFB132Q7Z7B7 95 aa24.56■■□□□ 1.52
CASP9-209ENST00000474305 PNISRQ8TF01 805 aaKnown RBP24.56■■□□□ 1.52
CASP9-209ENST00000474305 MRS2Q9HD23 443 aa24.56■■□□□ 1.52
CASP9-209ENST00000474305 MPRIPQ6WCQ1 1025 aa24.55■■□□□ 1.52
CASP9-209ENST00000474305 SYTL4Q96C24 671 aaPredicted RBP24.55■■□□□ 1.52
CASP9-209ENST00000474305 CAMKK2Q96RR4 588 aa24.55■■□□□ 1.52
CASP9-209ENST00000474305 BTAF1O14981 1849 aa24.54■■□□□ 1.52
CASP9-209ENST00000474305 KDM6AO15550 1401 aaPredicted RBP24.54■■□□□ 1.52
CASP9-209ENST00000474305 GNAT3A8MTJ3 354 aa24.54■■□□□ 1.52
CASP9-209ENST00000474305 SCN11AQ9UI33 1791 aa24.54■■□□□ 1.52
CASP9-209ENST00000474305 EN1Q05925 392 aaPredicted RBP24.53■■□□□ 1.52
CASP9-209ENST00000474305 VIRMAQ69YN4 1812 aaKnown RBP24.52■■□□□ 1.52
CASP9-209ENST00000474305 RNMTO43148 476 aaKnown RBP24.52■■□□□ 1.52
CASP9-209ENST00000474305 PIGBQ92521 554 aa24.52■■□□□ 1.52
CASP9-209ENST00000474305 LGR6Q9HBX8 967 aa24.52■■□□□ 1.52
CASP9-209ENST00000474305 ADAMTS7Q9UKP4 1686 aa24.52■■□□□ 1.52
CASP9-209ENST00000474305 HTATSF1O43719 755 aaKnown RBP24.51■■□□□ 1.51
CASP9-209ENST00000474305 RUNDC1Q96C34 613 aa24.51■■□□□ 1.51
CASP9-209ENST00000474305 MAP3K5Q99683 1374 aa24.51■■□□□ 1.51
CASP9-209ENST00000474305 NFE2L2Q16236 605 aa24.5■■□□□ 1.51
CASP9-209ENST00000474305 IL17REQ8NFR9 667 aa24.5■■□□□ 1.51
CASP9-209ENST00000474305 TMOD3Q9NYL9 352 aa24.5■■□□□ 1.51
CASP9-209ENST00000474305 MAPK8IP3Q9UPT6 1336 aa24.5■■□□□ 1.51
CASP9-209ENST00000474305 RGPD3A6NKT7 1758 aaPredicted RBP24.49■■□□□ 1.51
CASP9-209ENST00000474305 RGPD4Q7Z3J3 1758 aa24.49■■□□□ 1.51
CASP9-209ENST00000474305 EZH2Q15910 746 aaKnown RBP24.49■■□□□ 1.51
CASP9-209ENST00000474305 CCER2I3L3R5 266 aa24.48■■□□□ 1.51
CASP9-209ENST00000474305 CABP4P57796 275 aa24.48■■□□□ 1.51
CASP9-209ENST00000474305 DLG5Q8TDM6 1919 aa24.48■■□□□ 1.51
CASP9-209ENST00000474305 CCDC146Q8IYE0 955 aa24.47■■□□□ 1.51
CASP9-209ENST00000474305 PROM2Q8N271 834 aa24.47■■□□□ 1.51
CASP9-209ENST00000474305 NFATC2IPQ8NCF5 419 aa24.47■■□□□ 1.51
CASP9-209ENST00000474305 SLC52A2Q9HAB3 445 aa24.46■■□□□ 1.51
CASP9-209ENST00000474305 CEMIPQ8WUJ3 1361 aa24.45■■□□□ 1.5
CASP9-209ENST00000474305 TMPOP42166 694 aaKnown RBP24.45■■□□□ 1.5
CASP9-209ENST00000474305 RTF1Q92541 710 aaKnown RBP24.45■■□□□ 1.5
CASP9-209ENST00000474305 SMARCC1Q92922 1105 aaPredicted RBP24.45■■□□□ 1.5
CASP9-209ENST00000474305 TXNRD1Q16881 649 aa24.43■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms