RNA–Protein interactions for RNA: ENST00000473724.1

SBF1-206, Transcript of SET binding factor 1, humanhuman

TSL 2

Gene SBF1, Length 446 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBF1-206ENST00000473724 CDCA8Q53HL2 280 aa18.3■□□□□ 0.52
SBF1-206ENST00000473724 ZCRB1Q8TBF4 217 aaKnown RBP18.3■□□□□ 0.52
SBF1-206ENST00000473724 CHD4Q14839 1912 aa18.29■□□□□ 0.52
SBF1-206ENST00000473724 COL24A1Q17RW2 1714 aa18.29■□□□□ 0.52
SBF1-206ENST00000473724 RRS1Q15050 365 aaKnown RBP18.29■□□□□ 0.52
SBF1-206ENST00000473724 AKT1S1Q96B36 256 aa18.29■□□□□ 0.52
SBF1-206ENST00000473724 SYT17Q9BSW7 474 aa18.29■□□□□ 0.52
SBF1-206ENST00000473724 FHDC1Q9C0D6 1143 aaPredicted RBP18.29■□□□□ 0.52
SBF1-206ENST00000473724 GGNBP2Q9H3C7 697 aa18.29■□□□□ 0.52
SBF1-206ENST00000473724 CGNL1Q0VF96 1302 aa18.28■□□□□ 0.52
SBF1-206ENST00000473724 PRIM1P49642 420 aaKnown RBP18.28■□□□□ 0.52
SBF1-206ENST00000473724 NBPF6Q5VWK0 638 aa18.28■□□□□ 0.52
SBF1-206ENST00000473724 NBPF4Q96M43 638 aa18.28■□□□□ 0.52
SBF1-206ENST00000473724 SMG6Q86US8 1419 aaKnown RBP18.28■□□□□ 0.52
SBF1-206ENST00000473724 NSD2O96028 1365 aa18.28■□□□□ 0.52
SBF1-206ENST00000473724 ARXQ96QS3 562 aa18.27■□□□□ 0.52
SBF1-206ENST00000473724 SLC16A10Q8TF71 515 aa18.26■□□□□ 0.51
SBF1-206ENST00000473724 SYTL4Q96C24 671 aaPredicted RBP18.26■□□□□ 0.51
SBF1-206ENST00000473724 INSRP06213 1382 aa18.26■□□□□ 0.51
SBF1-206ENST00000473724 KIF24Q5T7B8 1368 aa18.26■□□□□ 0.51
SBF1-206ENST00000473724 MAP3K5Q99683 1374 aa18.26■□□□□ 0.51
SBF1-206ENST00000473724 RAPGEF4Q8WZA2 1011 aa18.24■□□□□ 0.51
SBF1-206ENST00000473724 FLT4P35916 1363 aa18.24■□□□□ 0.51
SBF1-206ENST00000473724 HSP90AB2PQ58FF8 381 aa18.23■□□□□ 0.51
SBF1-206ENST00000473724 USHBP1Q8N6Y0 703 aa18.23■□□□□ 0.51
SBF1-206ENST00000473724 TIMELESSQ9UNS1 1208 aa18.23■□□□□ 0.51
SBF1-206ENST00000473724 PNPLA7Q6ZV29 1317 aa18.23■□□□□ 0.51
SBF1-206ENST00000473724 MAP2P11137 1827 aaKnown RBP18.22■□□□□ 0.51
SBF1-206ENST00000473724 TATP17735 454 aaPredicted RBP18.22■□□□□ 0.51
SBF1-206ENST00000473724 CARD14Q9BXL6 1004 aa18.22■□□□□ 0.51
SBF1-206ENST00000473724 TFCP2L1Q9NZI6 479 aa18.22■□□□□ 0.51
SBF1-206ENST00000473724 ANKRD26Q9UPS8 1709 aa18.22■□□□□ 0.51
SBF1-206ENST00000473724 KCNQ4P56696 695 aa18.21■□□□□ 0.51
SBF1-206ENST00000473724 GOLGB1Q14789 3259 aaKnown RBP18.21■□□□□ 0.51
SBF1-206ENST00000473724 ITGB4P16144 1822 aa18.21■□□□□ 0.51
SBF1-206ENST00000473724 CCNL1Q9UK58 526 aaPredicted RBP18.2■□□□□ 0.5
SBF1-206ENST00000473724 TAF1LQ8IZX4 1826 aa18.2■□□□□ 0.5
SBF1-206ENST00000473724 NSD3Q9BZ95 1437 aa18.2■□□□□ 0.5
SBF1-206ENST00000473724 PKD1L3Q7Z443 1732 aa18.2■□□□□ 0.5
SBF1-206ENST00000473724 PCDH11XQ9BZA7 1347 aa18.2■□□□□ 0.5
SBF1-206ENST00000473724 PCDH11YQ9BZA8 1340 aa18.2■□□□□ 0.5
SBF1-206ENST00000473724 C5P01031 1676 aa18.19■□□□□ 0.5
SBF1-206ENST00000473724 POLD1P28340 1107 aa18.19■□□□□ 0.5
SBF1-206ENST00000473724 TOGARAM1Q9Y4F4 1720 aa18.17■□□□□ 0.5
SBF1-206ENST00000473724 CLSPNQ9HAW4 1339 aa18.17■□□□□ 0.5
SBF1-206ENST00000473724 NCAPD2Q15021 1401 aa18.16■□□□□ 0.5
SBF1-206ENST00000473724 EMILIN1Q9Y6C2 1016 aa18.16■□□□□ 0.5
SBF1-206ENST00000473724 HMGB2P26583 209 aaKnown RBP18.15■□□□□ 0.5
SBF1-206ENST00000473724 CYP27B1O15528 508 aa18.14■□□□□ 0.49
SBF1-206ENST00000473724 ZNF784Q8NCA9 323 aaPredicted RBP18.14■□□□□ 0.49
SBF1-206ENST00000473724 WASHC2AQ641Q2 1341 aa18.13■□□□□ 0.49
SBF1-206ENST00000473724 GPR162Q16538 588 aa18.12■□□□□ 0.49
SBF1-206ENST00000473724 MPRIPQ6WCQ1 1025 aa18.12■□□□□ 0.49
SBF1-206ENST00000473724 COL23A1Q86Y22 540 aaPredicted RBP18.12■□□□□ 0.49
SBF1-206ENST00000473724 PALLDQ8WX93 1383 aa18.12■□□□□ 0.49
SBF1-206ENST00000473724 PPM1GO15355 546 aaPredicted RBP18.11■□□□□ 0.49
SBF1-206ENST00000473724 KLHL34Q8N239 644 aa18.11■□□□□ 0.49
SBF1-206ENST00000473724 C4BP0C0L5 1744 aa18.1■□□□□ 0.49
SBF1-206ENST00000473724 MSH5O43196 834 aa18.1■□□□□ 0.49
SBF1-206ENST00000473724 NKX1-1Q15270 411 aaPredicted RBP18.1■□□□□ 0.49
SBF1-206ENST00000473724 SMARCC1Q92922 1105 aaPredicted RBP18.1■□□□□ 0.49
SBF1-206ENST00000473724 SPG7Q9UQ90 795 aa18.1■□□□□ 0.49
SBF1-206ENST00000473724 UBR3Q6ZT12 1888 aa18.09■□□□□ 0.49
SBF1-206ENST00000473724 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.09■□□□□ 0.49
SBF1-206ENST00000473724 FLAD1Q8NFF5 587 aa18.08■□□□□ 0.48
SBF1-206ENST00000473724 EYA1Q99502 592 aa18.08■□□□□ 0.48
SBF1-206ENST00000473724 POLKQ9UBT6 870 aa18.08■□□□□ 0.48
SBF1-206ENST00000473724 NLGN2Q8NFZ4 835 aa18.07■□□□□ 0.48
SBF1-206ENST00000473724 PIGBQ92521 554 aa18.07■□□□□ 0.48
SBF1-206ENST00000473724 PCGF6Q9BYE7 350 aa18.07■□□□□ 0.48
SBF1-206ENST00000473724 PLEKHG2Q9H7P9 1386 aa18.04■□□□□ 0.48
SBF1-206ENST00000473724 MSL1Q68DK7 614 aa18.04■□□□□ 0.48
SBF1-206ENST00000473724 PELP1Q8IZL8 1130 aaKnown RBP18.04■□□□□ 0.48
SBF1-206ENST00000473724 POLR3GLQ9BT43 218 aa18.04■□□□□ 0.48
SBF1-206ENST00000473724 EIF4A2Q14240 407 aaKnown RBP18.03■□□□□ 0.48
SBF1-206ENST00000473724 IFNL2Q8IZJ0 200 aa18.03■□□□□ 0.48
SBF1-206ENST00000473724 AK7Q96M32 723 aa18.03■□□□□ 0.48
SBF1-206ENST00000473724 LOC102724428A0A0B4J2F2 783 aa18.02■□□□□ 0.48
SBF1-206ENST00000473724 PHKG2P15735 406 aa18.02■□□□□ 0.48
SBF1-206ENST00000473724 SIK1P57059 783 aa18.02■□□□□ 0.48
SBF1-206ENST00000473724 EIF4G2P78344 907 aaKnown RBP eCLIP18.02■□□□□ 0.48
SBF1-206ENST00000473724 TMOD3Q9NYL9 352 aa18.02■□□□□ 0.48
SBF1-206ENST00000473724 GRIN3BO60391 1043 aa18.01■□□□□ 0.47
SBF1-206ENST00000473724 TNNT2P45379 298 aaPredicted RBP18.01■□□□□ 0.47
SBF1-206ENST00000473724 CD2APQ9Y5K6 639 aa18.01■□□□□ 0.47
SBF1-206ENST00000473724 HSPA5P11021 654 aaKnown RBP18■□□□□ 0.47
SBF1-206ENST00000473724 YBX3P16989 372 aaKnown RBP eCLIP18■□□□□ 0.47
SBF1-206ENST00000473724 AMIGO3Q86WK7 504 aa18■□□□□ 0.47
SBF1-206ENST00000473724 PANK3Q9H999 370 aa18■□□□□ 0.47
SBF1-206ENST00000473724 ZNF831Q5JPB2 1677 aa17.99■□□□□ 0.47
SBF1-206ENST00000473724 IGSF1Q8N6C5 1336 aa17.99■□□□□ 0.47
SBF1-206ENST00000473724 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.99■□□□□ 0.47
SBF1-206ENST00000473724 SSFA2P28290 1259 aa17.99■□□□□ 0.47
SBF1-206ENST00000473724 LINC00116Q8NCU8 138 aa17.99■□□□□ 0.47
SBF1-206ENST00000473724 ASAP1Q9ULH1 1129 aa17.99■□□□□ 0.47
SBF1-206ENST00000473724 PHF14O94880 888 aa17.97■□□□□ 0.47
SBF1-206ENST00000473724 ATP6V1AP38606 617 aa17.96■□□□□ 0.47
SBF1-206ENST00000473724 C1QTNF8P60827 252 aa17.96■□□□□ 0.47
SBF1-206ENST00000473724 ITPK1Q13572 414 aa17.96■□□□□ 0.47
SBF1-206ENST00000473724 ATG3Q9NT62 314 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms