RNA–Protein interactions for RNA: ENST00000472098.5

MDH1-210, Transcript of malate dehydrogenase 1, humanhuman

TSL 1 (best)

Gene MDH1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-210ENST00000472098 SENP2Q9HC62 589 aa12.18□□□□□ -0.46
MDH1-210ENST00000472098 EMILIN1Q9Y6C2 1016 aa12.17□□□□□ -0.46
MDH1-210ENST00000472098 RFX1P22670 979 aa12.16□□□□□ -0.46
MDH1-210ENST00000472098 NCOA4Q13772 614 aa12.16□□□□□ -0.46
MDH1-210ENST00000472098 DEPDC4Q8N2C3 294 aa12.16□□□□□ -0.46
MDH1-210ENST00000472098 CDCA7Q9BWT1 371 aaPredicted RBP12.16□□□□□ -0.46
MDH1-210ENST00000472098 TMPRSS4Q9NRS4 437 aa12.16□□□□□ -0.46
MDH1-210ENST00000472098 LORP23490 312 aaPredicted RBP12.15□□□□□ -0.46
MDH1-210ENST00000472098 EML3Q32P44 896 aa12.15□□□□□ -0.46
MDH1-210ENST00000472098 OXLD1Q5BKU9 147 aa12.15□□□□□ -0.46
MDH1-210ENST00000472098 PGPEP1Q9NXJ5 209 aa12.15□□□□□ -0.46
MDH1-210ENST00000472098 USP4Q13107 963 aa12.14□□□□□ -0.47
MDH1-210ENST00000472098 SIRT1Q96EB6 747 aa12.14□□□□□ -0.47
MDH1-210ENST00000472098 KLF16Q9BXK1 252 aaPredicted RBP12.14□□□□□ -0.47
MDH1-210ENST00000472098 ERVK-9P63128 1117 aa12.13□□□□□ -0.47
MDH1-210ENST00000472098 ZNF784Q8NCA9 323 aaPredicted RBP12.13□□□□□ -0.47
MDH1-210ENST00000472098 SRPK2P78362 688 aaKnown RBP12.12□□□□□ -0.47
MDH1-210ENST00000472098 CC2D2BQ6DHV5 1058 aa12.12□□□□□ -0.47
MDH1-210ENST00000472098 PBXIP1Q96AQ6 731 aa12.12□□□□□ -0.47
MDH1-210ENST00000472098 MYCP01106 439 aaPredicted RBP12.11□□□□□ -0.47
MDH1-210ENST00000472098 SCTRP47872 440 aa12.11□□□□□ -0.47
MDH1-210ENST00000472098 KANK4Q5T7N3 995 aaPredicted RBP12.11□□□□□ -0.47
MDH1-210ENST00000472098 KIFC2Q96AC6 838 aa12.11□□□□□ -0.47
MDH1-210ENST00000472098 CYLDQ9NQC7 956 aa12.11□□□□□ -0.47
MDH1-210ENST00000472098 MKRN1Q9UHC7 482 aaKnown RBP12.11□□□□□ -0.47
MDH1-210ENST00000472098 NOD1Q9Y239 953 aa12.11□□□□□ -0.47
MDH1-210ENST00000472098 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.1□□□□□ -0.47
MDH1-210ENST00000472098 LILRA1O75019 489 aa12.1□□□□□ -0.47
MDH1-210ENST00000472098 PPP1R15AO75807 674 aaPredicted RBP12.1□□□□□ -0.47
MDH1-210ENST00000472098 WDR4P57081 412 aaKnown RBP12.1□□□□□ -0.47
MDH1-210ENST00000472098 ITPKCQ96DU7 683 aa12.1□□□□□ -0.47
MDH1-210ENST00000472098 ESF1Q9H501 851 aaKnown RBP12.1□□□□□ -0.47
MDH1-210ENST00000472098 VRTNQ9H8Y1 702 aa12.1□□□□□ -0.47
MDH1-210ENST00000472098 ATP5J2-PTCD1G3V325 749 aa12.09□□□□□ -0.47
MDH1-210ENST00000472098 ZIC2O95409 532 aaPredicted RBP12.09□□□□□ -0.47
MDH1-210ENST00000472098 TIMP2P16035 220 aa12.09□□□□□ -0.47
MDH1-210ENST00000472098 TRIM46Q7Z4K8 759 aa12.09□□□□□ -0.47
MDH1-210ENST00000472098 TRIM50Q86XT4 487 aa12.08□□□□□ -0.48
MDH1-210ENST00000472098 BMP1P13497 986 aa12.07□□□□□ -0.48
MDH1-210ENST00000472098 ZFAND3Q9H8U3 227 aa12.07□□□□□ -0.48
MDH1-210ENST00000472098 ADD1P35611 737 aaKnown RBP12.06□□□□□ -0.48
MDH1-210ENST00000472098 HOMEZQ8IX15 550 aa12.06□□□□□ -0.48
MDH1-210ENST00000472098 OSBPL3Q9H4L5 887 aa12.06□□□□□ -0.48
MDH1-210ENST00000472098 ATP1A2P50993 1020 aa12.05□□□□□ -0.48
MDH1-210ENST00000472098 GTF2IP78347 998 aa12.05□□□□□ -0.48
MDH1-210ENST00000472098 CDCA8Q53HL2 280 aa12.05□□□□□ -0.48
MDH1-210ENST00000472098 RASA1P20936 1047 aa12.04□□□□□ -0.48
MDH1-210ENST00000472098 GMPRP36959 345 aa12.04□□□□□ -0.48
MDH1-210ENST00000472098 Q6ZVU0 165 aa12.04□□□□□ -0.48
MDH1-210ENST00000472098 OGFOD1Q8N543 542 aa12.04□□□□□ -0.48
MDH1-210ENST00000472098 NXF1Q9UBU9 619 aaKnown RBP12.04□□□□□ -0.48
MDH1-210ENST00000472098 PCDHGA11Q9Y5H2 935 aa12.04□□□□□ -0.48
MDH1-210ENST00000472098 FAM196BA6NMK8 535 aa12.03□□□□□ -0.48
MDH1-210ENST00000472098 CLDN10P78369 228 aa12.03□□□□□ -0.48
MDH1-210ENST00000472098 CBLBQ13191 982 aa12.03□□□□□ -0.48
MDH1-210ENST00000472098 LARP1Q6PKG0 1096 aaKnown RBP12.03□□□□□ -0.48
MDH1-210ENST00000472098 CYP2U1Q7Z449 544 aa12.03□□□□□ -0.48
MDH1-210ENST00000472098 DNAAF2Q9NVR5 837 aaKnown RBP12.03□□□□□ -0.48
MDH1-210ENST00000472098 CAPN5O15484 640 aaPredicted RBP12.02□□□□□ -0.49
MDH1-210ENST00000472098 ATG7O95352 703 aa12.02□□□□□ -0.49
MDH1-210ENST00000472098 ACIN1Q9UKV3 1341 aaKnown RBP12.02□□□□□ -0.49
MDH1-210ENST00000472098 ADH1AP07327 375 aa12.01□□□□□ -0.49
MDH1-210ENST00000472098 CRTC2Q53ET0 693 aaPredicted RBP12.01□□□□□ -0.49
MDH1-210ENST00000472098 LARGE2Q8N3Y3 721 aa12.01□□□□□ -0.49
MDH1-210ENST00000472098 USP17L15C9J2P7 530 aa12□□□□□ -0.49
MDH1-210ENST00000472098 USP17L10C9JJH3 530 aa12□□□□□ -0.49
MDH1-210ENST00000472098 USP17L13C9JLJ4 530 aa12□□□□□ -0.49
MDH1-210ENST00000472098 USP17L12C9JPN9 530 aa12□□□□□ -0.49
MDH1-210ENST00000472098 USP17L11C9JVI0 530 aa12□□□□□ -0.49
MDH1-210ENST00000472098 USP17L21D6R901 530 aa12□□□□□ -0.49
MDH1-210ENST00000472098 USP17L18D6R9N7 530 aa12□□□□□ -0.49
MDH1-210ENST00000472098 USP17L22D6RA61 530 aa12□□□□□ -0.49
MDH1-210ENST00000472098 USP17L17D6RBQ6 530 aa12□□□□□ -0.49
MDH1-210ENST00000472098 USP17L19D6RCP7 530 aa12□□□□□ -0.49
MDH1-210ENST00000472098 USP17L20D6RJB6 530 aa12□□□□□ -0.49
MDH1-210ENST00000472098 ZBTB7BO15156 539 aaPredicted RBP12□□□□□ -0.49
MDH1-210ENST00000472098 USP17L24Q0WX57 530 aa12□□□□□ -0.49
MDH1-210ENST00000472098 PTK7Q13308 1070 aa12□□□□□ -0.49
MDH1-210ENST00000472098 MEIOBQ8N635 442 aa12□□□□□ -0.49
MDH1-210ENST00000472098 PSME1Q06323 249 aa11.99□□□□□ -0.49
MDH1-210ENST00000472098 KIAA1024Q9UPX6 916 aa11.99□□□□□ -0.49
MDH1-210ENST00000472098 ERBB4Q15303 1308 aa11.99□□□□□ -0.49
MDH1-210ENST00000472098 GNRH1P01148 92 aa11.98□□□□□ -0.49
MDH1-210ENST00000472098 VEGFBP49765 207 aa11.98□□□□□ -0.49
MDH1-210ENST00000472098 ELOAQ14241 798 aaKnown RBP11.98□□□□□ -0.49
MDH1-210ENST00000472098 SIX5Q8N196 739 aa11.98□□□□□ -0.49
MDH1-210ENST00000472098 KDF1Q8NAX2 398 aaPredicted RBP11.98□□□□□ -0.49
MDH1-210ENST00000472098 ZNF594Q96JF6 807 aaPredicted RBP11.98□□□□□ -0.49
MDH1-210ENST00000472098 H3BM21 787 aa11.97□□□□□ -0.49
MDH1-210ENST00000472098 CCDC102BQ68D86 513 aa11.97□□□□□ -0.49
MDH1-210ENST00000472098 NPAS3Q8IXF0 933 aa11.97□□□□□ -0.49
MDH1-210ENST00000472098 SLC16A10Q8TF71 515 aa11.97□□□□□ -0.49
MDH1-210ENST00000472098 PTGIRP43119 386 aa11.96□□□□□ -0.49
MDH1-210ENST00000472098 ANKMY2Q8IV38 441 aa11.96□□□□□ -0.49
MDH1-210ENST00000472098 TPCN2Q8NHX9 752 aa11.96□□□□□ -0.49
MDH1-210ENST00000472098 AGBL1Q96MI9 1066 aa11.96□□□□□ -0.49
MDH1-210ENST00000472098 DKK1O94907 266 aa11.95□□□□□ -0.5
MDH1-210ENST00000472098 TSEN34Q9BSV6 310 aaKnown RBP11.95□□□□□ -0.5
MDH1-210ENST00000472098 NOVA2Q9UNW9 492 aaKnown RBP11.95□□□□□ -0.5
MDH1-210ENST00000472098 RBM19Q9Y4C8 960 aaKnown RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms