RNA–Protein interactions for RNA: ENST00000472098.5

MDH1-210, Transcript of malate dehydrogenase 1, humanhuman

TSL 1 (best)

Gene MDH1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-210ENST00000472098 AEBP2Q6ZN18 517 aaPredicted RBP35.08■■■■□ 3.21
MDH1-210ENST00000472098 CHIC1Q5VXU3 224 aa32.92■■■□□ 2.86
MDH1-210ENST00000472098 SENP3Q9H4L4 574 aaPredicted RBP29.78■■■□□ 2.36
MDH1-210ENST00000472098 PHF23Q9BUL5 403 aaPredicted RBP29.41■■■□□ 2.3
MDH1-210ENST00000472098 FOXD1Q16676 465 aa27.91■■■□□ 2.06
MDH1-210ENST00000472098 POTEDQ86YR6 584 aa26.1■■□□□ 1.77
MDH1-210ENST00000472098 MSH5O43196 834 aa26.08■■□□□ 1.77
MDH1-210ENST00000472098 PLPPR3Q6T4P5 718 aa26.07■■□□□ 1.76
MDH1-210ENST00000472098 PPP6R1Q9UPN7 881 aa25.93■■□□□ 1.74
MDH1-210ENST00000472098 PIAS4Q8N2W9 510 aaPredicted RBP25.9■■□□□ 1.74
MDH1-210ENST00000472098 ADRA2BP18089 450 aa25.76■■□□□ 1.71
MDH1-210ENST00000472098 MAPK8IP2Q13387 824 aaPredicted RBP23.79■■□□□ 1.4
MDH1-210ENST00000472098 DMRT2Q9Y5R5 561 aa23.63■■□□□ 1.37
MDH1-210ENST00000472098 SCAF1Q9H7N4 1312 aaKnown RBP23.35■■□□□ 1.33
MDH1-210ENST00000472098 PPP4R3CPQ6ZMV5 832 aa22.86■■□□□ 1.25
MDH1-210ENST00000472098 HOXD11P31277 338 aaPredicted RBP22.67■■□□□ 1.22
MDH1-210ENST00000472098 CACNB1Q02641 598 aaPredicted RBP22.56■■□□□ 1.2
MDH1-210ENST00000472098 DCAF8L1A6NGE4 600 aa22.52■■□□□ 1.2
MDH1-210ENST00000472098 CNKSR2Q8WXI2 1034 aa22.46■■□□□ 1.19
MDH1-210ENST00000472098 RNF216Q9NWF9 866 aaPredicted RBP22.36■■□□□ 1.17
MDH1-210ENST00000472098 RNF39Q9H2S5 420 aa22.35■■□□□ 1.17
MDH1-210ENST00000472098 KCNA4P22459 653 aa22.18■■□□□ 1.14
MDH1-210ENST00000472098 NCBP3Q53F19 620 aaKnown RBP21.92■■□□□ 1.1
MDH1-210ENST00000472098 C1QBPQ07021 282 aaKnown RBP21.91■■□□□ 1.1
MDH1-210ENST00000472098 DNAJC5BQ9UF47 199 aa21.9■■□□□ 1.1
MDH1-210ENST00000472098 NPM3O75607 178 aaKnown RBP21.62■■□□□ 1.05
MDH1-210ENST00000472098 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.45■■□□□ 1.023e-11■■□□□ 13.1
MDH1-210ENST00000472098 SLC4A1APQ9BWU0 796 aaKnown RBP21.18■□□□□ 0.98
MDH1-210ENST00000472098 U3KPZ7 1027 aaPredicted RBP21.12■□□□□ 0.97
MDH1-210ENST00000472098 SPINK5Q9NQ38 1064 aaPredicted RBP20.91■□□□□ 0.94
MDH1-210ENST00000472098 EHMT2Q96KQ7 1210 aa20.85■□□□□ 0.93
MDH1-210ENST00000472098 DSG3P32926 999 aa20.81■□□□□ 0.92
MDH1-210ENST00000472098 SLC4A2P04920 1241 aa20.8■□□□□ 0.92
MDH1-210ENST00000472098 CAPN15O75808 1086 aa20.74■□□□□ 0.91
MDH1-210ENST00000472098 CSRNP3Q8WYN3 585 aa20.51■□□□□ 0.87
MDH1-210ENST00000472098 ZBTB22O15209 634 aa20.4■□□□□ 0.86
MDH1-210ENST00000472098 TRHP20396 242 aaPredicted RBP20.36■□□□□ 0.85
MDH1-210ENST00000472098 FOXD4L1Q9NU39 408 aa20.35■□□□□ 0.85
MDH1-210ENST00000472098 POTEHQ6S545 545 aa20.34■□□□□ 0.85
MDH1-210ENST00000472098 ABCB7O75027 752 aa20.31■□□□□ 0.84
MDH1-210ENST00000472098 ZNF219Q9P2Y4 722 aaPredicted RBP20.28■□□□□ 0.84
MDH1-210ENST00000472098 APLP2Q06481 763 aa20.23■□□□□ 0.83
MDH1-210ENST00000472098 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.21■□□□□ 0.83
MDH1-210ENST00000472098 HNRNPUL2Q1KMD3 747 aaKnown RBP20.21■□□□□ 0.83
MDH1-210ENST00000472098 SAMD1Q6SPF0 538 aaPredicted RBP20.13■□□□□ 0.81
MDH1-210ENST00000472098 MYCNP04198 464 aaPredicted RBP19.94■□□□□ 0.78
MDH1-210ENST00000472098 POLA2Q14181 598 aa19.78■□□□□ 0.76
MDH1-210ENST00000472098 RBM42Q9BTD8 480 aaKnown RBP19.71■□□□□ 0.75
MDH1-210ENST00000472098 ATF5Q9Y2D1 282 aaPredicted RBP19.65■□□□□ 0.74
MDH1-210ENST00000472098 ATXN8OSP0DMR3 200 aa19.64■□□□□ 0.73
MDH1-210ENST00000472098 CHRDL2Q6WN34 429 aa19.51■□□□□ 0.71
MDH1-210ENST00000472098 AKT1S1Q96B36 256 aa19.27■□□□□ 0.68
MDH1-210ENST00000472098 ZBTB12Q9Y330 459 aaPredicted RBP19.25■□□□□ 0.67
MDH1-210ENST00000472098 OSCARQ8IYS5 282 aa19.19■□□□□ 0.66
MDH1-210ENST00000472098 REM2Q8IYK8 340 aaPredicted RBP19.13■□□□□ 0.65
MDH1-210ENST00000472098 PIP4P2Q8N4L2 257 aa19.02■□□□□ 0.64
MDH1-210ENST00000472098 PITPNM1O00562 1244 aa18.96■□□□□ 0.63
MDH1-210ENST00000472098 SP7Q8TDD2 431 aaPredicted RBP18.92■□□□□ 0.62
MDH1-210ENST00000472098 FXR2P51116 673 aaKnown RBP eCLIP18.86■□□□□ 0.61
MDH1-210ENST00000472098 MKRN4PQ13434 485 aaPredicted RBP18.72■□□□□ 0.59
MDH1-210ENST00000472098 SPDYE2BA6NHP3 402 aa18.71■□□□□ 0.59
MDH1-210ENST00000472098 SPDYE6P0CI01 402 aa18.71■□□□□ 0.59
MDH1-210ENST00000472098 SPDYE2Q495Y8 402 aa18.71■□□□□ 0.59
MDH1-210ENST00000472098 HAX1O00165 279 aa18.64■□□□□ 0.57
MDH1-210ENST00000472098 FBLN2P98095 1184 aa18.64■□□□□ 0.57
MDH1-210ENST00000472098 EVX2Q03828 476 aa18.6■□□□□ 0.57
MDH1-210ENST00000472098 FKBP8Q14318 412 aa18.52■□□□□ 0.56
MDH1-210ENST00000472098 SSUH2Q9Y2M2 353 aa18.52■□□□□ 0.56
MDH1-210ENST00000472098 SPDYE1Q8NFV5 336 aaPredicted RBP18.42■□□□□ 0.54
MDH1-210ENST00000472098 ZNF692Q9BU19 519 aaPredicted RBP18.41■□□□□ 0.54
MDH1-210ENST00000472098 PRKAR2AP13861 404 aaKnown RBP18.4■□□□□ 0.54
MDH1-210ENST00000472098 CLEC11AQ9Y240 323 aa18.39■□□□□ 0.53
MDH1-210ENST00000472098 C19orf67A6NJJ6 358 aa18.26■□□□□ 0.51
MDH1-210ENST00000472098 SPDYE4A6NLX3 237 aa18.26■□□□□ 0.51
MDH1-210ENST00000472098 CHADLQ6NUI6 762 aa18.18■□□□□ 0.5
MDH1-210ENST00000472098 PABPN1Q86U42 306 aaKnown RBP eCLIP18.17■□□□□ 0.5
MDH1-210ENST00000472098 GABBR2O75899 941 aa18.05■□□□□ 0.48
MDH1-210ENST00000472098 PRR29P0C7W0 189 aa18.04■□□□□ 0.48
MDH1-210ENST00000472098 PROM2Q8N271 834 aa18.02■□□□□ 0.48
MDH1-210ENST00000472098 FARP1Q9Y4F1 1045 aaPredicted RBP17.85■□□□□ 0.45
MDH1-210ENST00000472098 FBXO3Q9UK99 471 aa17.82■□□□□ 0.44
MDH1-210ENST00000472098 CD44P16070 742 aaKnown RBP17.79■□□□□ 0.44
MDH1-210ENST00000472098 POTEIP0CG38 1075 aa17.78■□□□□ 0.44
MDH1-210ENST00000472098 LHX8Q68G74 356 aa17.72■□□□□ 0.43
MDH1-210ENST00000472098 CREBZFQ9NS37 354 aa17.66■□□□□ 0.42
MDH1-210ENST00000472098 VASPP50552 380 aaPredicted RBP17.56■□□□□ 0.4
MDH1-210ENST00000472098 STAG3Q9UJ98 1225 aa17.56■□□□□ 0.4
MDH1-210ENST00000472098 ZNF579Q8NAF0 562 aaKnown RBP17.55■□□□□ 0.4
MDH1-210ENST00000472098 CLCN6P51797 869 aa17.52■□□□□ 0.4
MDH1-210ENST00000472098 ZRANB1Q9UGI0 708 aa17.48■□□□□ 0.39
MDH1-210ENST00000472098 MNX1P50219 401 aaPredicted RBP17.4■□□□□ 0.38
MDH1-210ENST00000472098 GALR2O43603 387 aaPredicted RBP17.39■□□□□ 0.37
MDH1-210ENST00000472098 DCBLD2Q96PD2 775 aa17.37■□□□□ 0.37
MDH1-210ENST00000472098 AMER1Q5JTC6 1135 aaPredicted RBP17.36■□□□□ 0.37
MDH1-210ENST00000472098 IFNLR1Q8IU57 520 aaPredicted RBP17.33■□□□□ 0.36
MDH1-210ENST00000472098 RTN4Q9NQC3 1192 aaKnown RBP17.3■□□□□ 0.36
MDH1-210ENST00000472098 MIER1Q8N108 512 aa17.29■□□□□ 0.36
MDH1-210ENST00000472098 PLCD3Q8N3E9 789 aa17.29■□□□□ 0.36
MDH1-210ENST00000472098 PHF12Q96QT6 1004 aa17.29■□□□□ 0.36
MDH1-210ENST00000472098 POTEB2H3BUK9 544 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms