RNA–Protein interactions for RNA: ENST00000472066.1

PRKCB-205, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-205ENST00000472066 DIEXFQ68CQ4 756 aaKnown RBP16.48■□□□□ 0.23
PRKCB-205ENST00000472066 DDX54Q8TDD1 881 aaKnown RBP16.48■□□□□ 0.23
PRKCB-205ENST00000472066 PARP4Q9UKK3 1724 aaKnown RBP16.48■□□□□ 0.23
PRKCB-205ENST00000472066 TNS2Q63HR2 1409 aa16.47■□□□□ 0.23
PRKCB-205ENST00000472066 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.47■□□□□ 0.23
PRKCB-205ENST00000472066 SPG7Q9UQ90 795 aa16.47■□□□□ 0.23
PRKCB-205ENST00000472066 RGPD1P0DJD0 1748 aa16.47■□□□□ 0.23
PRKCB-205ENST00000472066 CCDC184Q52MB2 194 aa16.46■□□□□ 0.23
PRKCB-205ENST00000472066 LRRC37A3O60309 1634 aa16.45■□□□□ 0.22
PRKCB-205ENST00000472066 FCHSD2O94868 740 aa16.45■□□□□ 0.22
PRKCB-205ENST00000472066 AMOTQ4VCS5 1084 aa16.45■□□□□ 0.22
PRKCB-205ENST00000472066 PLEKHO1Q53GL0 409 aaPredicted RBP16.45■□□□□ 0.22
PRKCB-205ENST00000472066 FAM196AQ6ZSG2 479 aa16.45■□□□□ 0.22
PRKCB-205ENST00000472066 RSPH6AQ9H0K4 717 aa16.45■□□□□ 0.22
PRKCB-205ENST00000472066 PLEKHG2Q9H7P9 1386 aa16.45■□□□□ 0.22
PRKCB-205ENST00000472066 WNK3Q9BYP7 1800 aa16.45■□□□□ 0.22
PRKCB-205ENST00000472066 PCDH11XQ9BZA7 1347 aa16.44■□□□□ 0.22
PRKCB-205ENST00000472066 PCDH11YQ9BZA8 1340 aa16.44■□□□□ 0.22
PRKCB-205ENST00000472066 BRWD3Q6RI45 1802 aa16.43■□□□□ 0.22
PRKCB-205ENST00000472066 CYP27B1O15528 508 aa16.43■□□□□ 0.22
PRKCB-205ENST00000472066 PRKAR2BP31323 418 aa16.43■□□□□ 0.22
PRKCB-205ENST00000472066 WDR43Q15061 677 aaKnown RBP eCLIP16.42■□□□□ 0.22
PRKCB-205ENST00000472066 PHKG2P15735 406 aa16.41■□□□□ 0.22
PRKCB-205ENST00000472066 IFNL2Q8IZJ0 200 aa16.41■□□□□ 0.22
PRKCB-205ENST00000472066 MRS2Q9HD23 443 aa16.41■□□□□ 0.22
PRKCB-205ENST00000472066 BCL9O00512 1426 aa16.4■□□□□ 0.22
PRKCB-205ENST00000472066 NKX1-1Q15270 411 aaPredicted RBP16.4■□□□□ 0.22
PRKCB-205ENST00000472066 MTHFSDQ2M296 383 aaKnown RBP16.4■□□□□ 0.22
PRKCB-205ENST00000472066 ZNF530Q6P9A1 599 aaPredicted RBP16.4■□□□□ 0.22
PRKCB-205ENST00000472066 UPF1Q92900 1129 aaKnown RBP eCLIP16.4■□□□□ 0.22
PRKCB-205ENST00000472066 PHACTR3Q96KR7 559 aa16.4■□□□□ 0.22
PRKCB-205ENST00000472066 ADAMTS8Q9UP79 889 aa16.4■□□□□ 0.22
PRKCB-205ENST00000472066 PLEKHF1Q96S99 279 aa16.39■□□□□ 0.21
PRKCB-205ENST00000472066 PNNQ9H307 717 aaKnown RBP16.39■□□□□ 0.21
PRKCB-205ENST00000472066 EP400Q96L91 3159 aa16.38■□□□□ 0.21
PRKCB-205ENST00000472066 TRIM37O94972 964 aa16.38■□□□□ 0.21
PRKCB-205ENST00000472066 C1orf141Q5JVX7 400 aa16.38■□□□□ 0.21
PRKCB-205ENST00000472066 PNISRQ8TF01 805 aaKnown RBP16.38■□□□□ 0.21
PRKCB-205ENST00000472066 SOCS7O14512 581 aa16.37■□□□□ 0.21
PRKCB-205ENST00000472066 AKAP4Q5JQC9 854 aa16.37■□□□□ 0.21
PRKCB-205ENST00000472066 CCDC125Q86Z20 511 aa16.37■□□□□ 0.21
PRKCB-205ENST00000472066 ACSBG1Q96GR2 724 aa16.37■□□□□ 0.21
PRKCB-205ENST00000472066 PKD1L3Q7Z443 1732 aa16.36■□□□□ 0.21
PRKCB-205ENST00000472066 KCNQ2O43526 872 aa16.36■□□□□ 0.21
PRKCB-205ENST00000472066 HSP90AB1P08238 724 aaKnown RBP16.36■□□□□ 0.21
PRKCB-205ENST00000472066 GAS2L2Q8NHY3 880 aa16.36■□□□□ 0.21
PRKCB-205ENST00000472066 NEFMP07197 916 aa16.35■□□□□ 0.21
PRKCB-205ENST00000472066 PRIM1P49642 420 aaKnown RBP16.35■□□□□ 0.21
PRKCB-205ENST00000472066 PTF1AQ7RTS3 328 aa16.35■□□□□ 0.21
PRKCB-205ENST00000472066 MIER1Q8N108 512 aa16.35■□□□□ 0.21
PRKCB-205ENST00000472066 BCL11BQ9C0K0 894 aaPredicted RBP16.35■□□□□ 0.21
PRKCB-205ENST00000472066 SHANK3Q9BYB0 1731 aa16.34■□□□□ 0.21
PRKCB-205ENST00000472066 CCER2I3L3R5 266 aa16.34■□□□□ 0.21
PRKCB-205ENST00000472066 MPRIPQ6WCQ1 1025 aa16.34■□□□□ 0.21
PRKCB-205ENST00000472066 DCAF5Q96JK2 942 aa16.34■□□□□ 0.21
PRKCB-205ENST00000472066 SF3B2Q13435 895 aaKnown RBP16.33■□□□□ 0.2
PRKCB-205ENST00000472066 CCDC146Q8IYE0 955 aa16.33■□□□□ 0.2
PRKCB-205ENST00000472066 SYTL4Q96C24 671 aaPredicted RBP16.33■□□□□ 0.2
PRKCB-205ENST00000472066 RUNDC1Q96C34 613 aa16.33■□□□□ 0.2
PRKCB-205ENST00000472066 MAPK8IP3Q9UPT6 1336 aa16.33■□□□□ 0.2
PRKCB-205ENST00000472066 GNAT3A8MTJ3 354 aa16.32■□□□□ 0.2
PRKCB-205ENST00000472066 APBA3O96018 575 aa16.32■□□□□ 0.2
PRKCB-205ENST00000472066 LGR6Q9HBX8 967 aa16.32■□□□□ 0.2
PRKCB-205ENST00000472066 ERVV-2B6SEH9 535 aa16.31■□□□□ 0.2
PRKCB-205ENST00000472066 MAP3K5Q99683 1374 aa16.3■□□□□ 0.2
PRKCB-205ENST00000472066 RNMTO43148 476 aaKnown RBP16.3■□□□□ 0.2
PRKCB-205ENST00000472066 NFE2L2Q16236 605 aa16.3■□□□□ 0.2
PRKCB-205ENST00000472066 KDM6AO15550 1401 aaPredicted RBP16.29■□□□□ 0.2
PRKCB-205ENST00000472066 HTATSF1O43719 755 aaKnown RBP16.29■□□□□ 0.2
PRKCB-205ENST00000472066 FAM9BQ8IZU0 186 aa16.29■□□□□ 0.2
PRKCB-205ENST00000472066 IL17REQ8NFR9 667 aa16.29■□□□□ 0.2
PRKCB-205ENST00000472066 TMPOP42166 694 aaKnown RBP16.28■□□□□ 0.2
PRKCB-205ENST00000472066 BAG6P46379 1132 aa16.28■□□□□ 0.2
PRKCB-205ENST00000472066 CABP4P57796 275 aa16.28■□□□□ 0.2
PRKCB-205ENST00000472066 DEFB132Q7Z7B7 95 aa16.28■□□□□ 0.2
PRKCB-205ENST00000472066 PIGBQ92521 554 aa16.28■□□□□ 0.2
PRKCB-205ENST00000472066 RTF1Q92541 710 aaKnown RBP16.28■□□□□ 0.2
PRKCB-205ENST00000472066 TMOD3Q9NYL9 352 aa16.28■□□□□ 0.2
PRKCB-205ENST00000472066 PLSCR1O15162 318 aa16.27■□□□□ 0.2
PRKCB-205ENST00000472066 RIPK4P57078 832 aa16.27■□□□□ 0.2
PRKCB-205ENST00000472066 NFATC2IPQ8NCF5 419 aa16.27■□□□□ 0.2
PRKCB-205ENST00000472066 APAF1O14727 1248 aa16.26■□□□□ 0.19
PRKCB-205ENST00000472066 EN1Q05925 392 aaPredicted RBP16.26■□□□□ 0.19
PRKCB-205ENST00000472066 SLC52A2Q9HAB3 445 aa16.26■□□□□ 0.19
PRKCB-205ENST00000472066 NHSQ6T4R5 1651 aa16.25■□□□□ 0.19
PRKCB-205ENST00000472066 DCTN1Q14203 1278 aa16.25■□□□□ 0.19
PRKCB-205ENST00000472066 NEUROD2Q15784 382 aa16.25■□□□□ 0.19
PRKCB-205ENST00000472066 MCM10Q7L590 875 aa16.25■□□□□ 0.19
PRKCB-205ENST00000472066 CAMKK2Q96RR4 588 aa16.25■□□□□ 0.19
PRKCB-205ENST00000472066 RRP7AQ9Y3A4 280 aaKnown RBP16.25■□□□□ 0.19
PRKCB-205ENST00000472066 CEMIPQ8WUJ3 1361 aa16.25■□□□□ 0.19
PRKCB-205ENST00000472066 EZH2Q15910 746 aaKnown RBP16.24■□□□□ 0.19
PRKCB-205ENST00000472066 DOT1LQ8TEK3 1739 aa16.24■□□□□ 0.19
PRKCB-205ENST00000472066 SBF2Q86WG5 1849 aa16.24■□□□□ 0.19
PRKCB-205ENST00000472066 TOGARAM1Q9Y4F4 1720 aa16.23■□□□□ 0.19
PRKCB-205ENST00000472066 TEFQ10587 303 aa16.23■□□□□ 0.19
PRKCB-205ENST00000472066 ATG3Q9NT62 314 aa16.23■□□□□ 0.19
PRKCB-205ENST00000472066 ASAP1Q9ULH1 1129 aa16.23■□□□□ 0.19
PRKCB-205ENST00000472066 LMOD3Q0VAK6 560 aa16.22■□□□□ 0.19
PRKCB-205ENST00000472066 PROM2Q8N271 834 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms