RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 NCBP3Q53F19 620 aaKnown RBP22.96■■□□□ 1.27
HSPG2-208ENST00000471322 APAF1O14727 1248 aa22.95■■□□□ 1.26
HSPG2-208ENST00000471322 DDB1Q16531 1140 aa22.95■■□□□ 1.26
HSPG2-208ENST00000471322 ZNF521Q96K83 1311 aa22.94■■□□□ 1.26
HSPG2-208ENST00000471322 EIF4A2Q14240 407 aaKnown RBP22.94■■□□□ 1.26
HSPG2-208ENST00000471322 UPF1Q92900 1129 aaKnown RBP eCLIP22.94■■□□□ 1.26
HSPG2-208ENST00000471322 DIAPH1O60610 1272 aaKnown RBP22.93■■□□□ 1.26
HSPG2-208ENST00000471322 U2AF1L5P0DN76 240 aaPredicted RBP22.93■■□□□ 1.26
HSPG2-208ENST00000471322 IL2RBP14784 551 aa22.93■■□□□ 1.26
HSPG2-208ENST00000471322 U2AF1Q01081 240 aaKnown RBP eCLIP22.93■■□□□ 1.26
HSPG2-208ENST00000471322 PNNQ9H307 717 aaKnown RBP22.93■■□□□ 1.26
HSPG2-208ENST00000471322 DISP2A7MBM2 1401 aa22.93■■□□□ 1.26
HSPG2-208ENST00000471322 GOLGA2Q08379 1002 aa22.92■■□□□ 1.26
HSPG2-208ENST00000471322 EYA1Q99502 592 aa22.91■■□□□ 1.26
HSPG2-208ENST00000471322 COL3A1P02461 1466 aaPredicted RBP22.91■■□□□ 1.26
HSPG2-208ENST00000471322 LRRC37A3O60309 1634 aa22.91■■□□□ 1.26
HSPG2-208ENST00000471322 RNF123Q5XPI4 1314 aa22.91■■□□□ 1.26
HSPG2-208ENST00000471322 FAM208AQ9UK61 1670 aaKnown RBP22.9■■□□□ 1.26
HSPG2-208ENST00000471322 EXOC5O00471 708 aa22.9■■□□□ 1.26
HSPG2-208ENST00000471322 CDCA7Q9BWT1 371 aaPredicted RBP22.9■■□□□ 1.26
HSPG2-208ENST00000471322 WNK3Q9BYP7 1800 aa22.9■■□□□ 1.26
HSPG2-208ENST00000471322 PARP4Q9UKK3 1724 aaKnown RBP22.9■■□□□ 1.26
HSPG2-208ENST00000471322 CDCA7LQ96GN5 454 aa22.9■■□□□ 1.26
HSPG2-208ENST00000471322 U2SURPO15042 1029 aaKnown RBP22.87■■□□□ 1.25
HSPG2-208ENST00000471322 MARCH10Q8NA82 808 aaPredicted RBP22.87■■□□□ 1.25
HSPG2-208ENST00000471322 MEGF6O75095 1541 aa22.87■■□□□ 1.25
HSPG2-208ENST00000471322 RCAN3Q9UKA8 241 aa22.86■■□□□ 1.25
HSPG2-208ENST00000471322 CCDC27Q2M243 656 aa22.86■■□□□ 1.25
HSPG2-208ENST00000471322 DDX54Q8TDD1 881 aaKnown RBP22.86■■□□□ 1.25
HSPG2-208ENST00000471322 RAPGEF4Q8WZA2 1011 aa22.86■■□□□ 1.25
HSPG2-208ENST00000471322 TNS2Q63HR2 1409 aa22.84■■□□□ 1.25
HSPG2-208ENST00000471322 E9PSI1 815 aa22.84■■□□□ 1.25
HSPG2-208ENST00000471322 SLFN5Q08AF3 891 aa22.84■■□□□ 1.25
HSPG2-208ENST00000471322 FCHSD2O94868 740 aa22.83■■□□□ 1.25
HSPG2-208ENST00000471322 TRIM37O94972 964 aa22.83■■□□□ 1.25
HSPG2-208ENST00000471322 FAM196AQ6ZSG2 479 aa22.83■■□□□ 1.25
HSPG2-208ENST00000471322 IL13P35225 146 aa22.82■■□□□ 1.24
HSPG2-208ENST00000471322 WWC1Q8IX03 1113 aa22.82■■□□□ 1.24
HSPG2-208ENST00000471322 TRMT2AQ8IZ69 625 aaKnown RBP22.82■■□□□ 1.24
HSPG2-208ENST00000471322 TATP17735 454 aaPredicted RBP22.82■■□□□ 1.24
HSPG2-208ENST00000471322 DUSP27Q5VZP5 1158 aa22.82■■□□□ 1.24
HSPG2-208ENST00000471322 AEBP1Q8IUX7 1158 aa22.82■■□□□ 1.24
HSPG2-208ENST00000471322 WDR63Q8IWG1 891 aa22.81■■□□□ 1.24
HSPG2-208ENST00000471322 PELP1Q8IZL8 1130 aaKnown RBP22.81■■□□□ 1.24
HSPG2-208ENST00000471322 ZCRB1Q8TBF4 217 aaKnown RBP22.81■■□□□ 1.24
HSPG2-208ENST00000471322 PLEKHF1Q96S99 279 aa22.81■■□□□ 1.24
HSPG2-208ENST00000471322 MAPK8IP3Q9UPT6 1336 aa22.81■■□□□ 1.24
HSPG2-208ENST00000471322 OVOS2A0A0G2JMS6 1433 aa22.8■■□□□ 1.24
HSPG2-208ENST00000471322 IGSF1Q8N6C5 1336 aa22.8■■□□□ 1.24
HSPG2-208ENST00000471322 NEFMP07197 916 aa22.79■■□□□ 1.24
HSPG2-208ENST00000471322 SULT6B1Q6IMI4 303 aa22.79■■□□□ 1.24
HSPG2-208ENST00000471322 PTF1AQ7RTS3 328 aa22.79■■□□□ 1.24
HSPG2-208ENST00000471322 DEFB132Q7Z7B7 95 aa22.79■■□□□ 1.24
HSPG2-208ENST00000471322 HMOX1P09601 288 aa22.78■■□□□ 1.24
HSPG2-208ENST00000471322 NCAPD2Q15021 1401 aa22.77■■□□□ 1.24
HSPG2-208ENST00000471322 IRX6P78412 446 aaPredicted RBP22.77■■□□□ 1.24
HSPG2-208ENST00000471322 SF3B2Q13435 895 aaKnown RBP22.77■■□□□ 1.24
HSPG2-208ENST00000471322 ACSBG1Q96GR2 724 aa22.77■■□□□ 1.24
HSPG2-208ENST00000471322 RRP1P56182 461 aaKnown RBP22.75■■□□□ 1.23
HSPG2-208ENST00000471322 NEUROD2Q15784 382 aa22.75■■□□□ 1.23
HSPG2-208ENST00000471322 PPP4R2Q9NY27 417 aa22.75■■□□□ 1.23
HSPG2-208ENST00000471322 RRP7AQ9Y3A4 280 aaKnown RBP22.75■■□□□ 1.23
HSPG2-208ENST00000471322 SRCAPQ6ZRS2 3230 aa22.74■■□□□ 1.23
HSPG2-208ENST00000471322 KCNQ2O43526 872 aa22.74■■□□□ 1.23
HSPG2-208ENST00000471322 TMPOP42166 694 aaKnown RBP22.74■■□□□ 1.23
HSPG2-208ENST00000471322 CCDC125Q86Z20 511 aa22.74■■□□□ 1.23
HSPG2-208ENST00000471322 RSPH6AQ9H0K4 717 aa22.74■■□□□ 1.23
HSPG2-208ENST00000471322 KAT6BQ8WYB5 2073 aa22.73■■□□□ 1.23
HSPG2-208ENST00000471322 CYP27B1O15528 508 aa22.72■■□□□ 1.23
HSPG2-208ENST00000471322 APBA3O96018 575 aa22.72■■□□□ 1.23
HSPG2-208ENST00000471322 SHANK3Q9BYB0 1731 aa22.72■■□□□ 1.23
HSPG2-208ENST00000471322 RGPD1P0DJD0 1748 aa22.72■■□□□ 1.23
HSPG2-208ENST00000471322 EN1Q05925 392 aaPredicted RBP22.71■■□□□ 1.23
HSPG2-208ENST00000471322 PCDH11XQ9BZA7 1347 aa22.7■■□□□ 1.22
HSPG2-208ENST00000471322 PCDH11YQ9BZA8 1340 aa22.7■■□□□ 1.22
HSPG2-208ENST00000471322 PRKAR2BP31323 418 aa22.7■■□□□ 1.22
HSPG2-208ENST00000471322 SYTL4Q96C24 671 aaPredicted RBP22.7■■□□□ 1.22
HSPG2-208ENST00000471322 MYH16Q9H6N6 1097 aa22.7■■□□□ 1.22
HSPG2-208ENST00000471322 SPINK5Q9NQ38 1064 aaPredicted RBP22.7■■□□□ 1.22
HSPG2-208ENST00000471322 SPG7Q9UQ90 795 aa22.7■■□□□ 1.22
HSPG2-208ENST00000471322 KDRP35968 1356 aa22.68■■□□□ 1.22
HSPG2-208ENST00000471322 SBF2Q86WG5 1849 aa22.68■■□□□ 1.22
HSPG2-208ENST00000471322 BAG6P46379 1132 aa22.68■■□□□ 1.22
HSPG2-208ENST00000471322 RIPK4P57078 832 aa22.68■■□□□ 1.22
HSPG2-208ENST00000471322 BCL11BQ9C0K0 894 aaPredicted RBP22.68■■□□□ 1.22
HSPG2-208ENST00000471322 TNS1Q9HBL0 1735 aaKnown RBP22.68■■□□□ 1.22
HSPG2-208ENST00000471322 IL16Q14005 1332 aa22.67■■□□□ 1.22
HSPG2-208ENST00000471322 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.67■■□□□ 1.22
HSPG2-208ENST00000471322 BCL9O00512 1426 aa22.66■■□□□ 1.22
HSPG2-208ENST00000471322 PRIM1P49642 420 aaKnown RBP22.66■■□□□ 1.22
HSPG2-208ENST00000471322 PKD1L3Q7Z443 1732 aa22.66■■□□□ 1.22
HSPG2-208ENST00000471322 TRIM35Q9UPQ4 493 aa22.65■■□□□ 1.22
HSPG2-208ENST00000471322 EZH2Q15910 746 aaKnown RBP22.64■■□□□ 1.22
HSPG2-208ENST00000471322 NFE2L2Q16236 605 aa22.64■■□□□ 1.22
HSPG2-208ENST00000471322 PLEKHO1Q53GL0 409 aaPredicted RBP22.64■■□□□ 1.22
HSPG2-208ENST00000471322 ZNF530Q6P9A1 599 aaPredicted RBP22.64■■□□□ 1.22
HSPG2-208ENST00000471322 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.64■■□□□ 1.22
HSPG2-208ENST00000471322 PHKG2P15735 406 aa22.64■■□□□ 1.21
HSPG2-208ENST00000471322 CALD1Q05682 793 aaKnown RBP22.63■■□□□ 1.21
HSPG2-208ENST00000471322 LMOD3Q0VAK6 560 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms