RNA–Protein interactions for RNA: ENST00000471117.5

FDPS-209, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 3

Gene FDPS, Length 630 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-209ENST00000471117 PAK3O75914 559 aaPredicted RBP11.24□□□□□ -0.61
FDPS-209ENST00000471117 ZNF692Q9BU19 519 aaPredicted RBP11.24□□□□□ -0.61
FDPS-209ENST00000471117 CPSF1Q10570 1443 aaKnown RBP11.24□□□□□ -0.61
FDPS-209ENST00000471117 ZNF827Q17R98 1081 aa11.23□□□□□ -0.61
FDPS-209ENST00000471117 ACEP12821 1306 aa11.23□□□□□ -0.61
FDPS-209ENST00000471117 CGNL1Q0VF96 1302 aa11.23□□□□□ -0.61
FDPS-209ENST00000471117 ANKRD26Q9UPS8 1709 aa11.23□□□□□ -0.61
FDPS-209ENST00000471117 HNRNPUQ00839 825 aaKnown RBP eCLIP11.22□□□□□ -0.613e-6■■■□□ 17.5
FDPS-209ENST00000471117 COL24A1Q17RW2 1714 aa11.22□□□□□ -0.61
FDPS-209ENST00000471117 EDC4Q6P2E9 1401 aaKnown RBP11.22□□□□□ -0.61
FDPS-209ENST00000471117 NGDNQ8NEJ9 315 aaKnown RBP11.22□□□□□ -0.61
FDPS-209ENST00000471117 PNISRQ8TF01 805 aaKnown RBP11.22□□□□□ -0.61
FDPS-209ENST00000471117 LRRC37A3O60309 1634 aa11.21□□□□□ -0.61
FDPS-209ENST00000471117 POLR3AO14802 1390 aaPredicted RBP11.21□□□□□ -0.61
FDPS-209ENST00000471117 NSD2O96028 1365 aa11.21□□□□□ -0.61
FDPS-209ENST00000471117 PCNTO95613 3336 aa11.2□□□□□ -0.62
FDPS-209ENST00000471117 PPP2R1AP30153 589 aa11.2□□□□□ -0.62
FDPS-209ENST00000471117 DDB1Q16531 1140 aa11.2□□□□□ -0.62
FDPS-209ENST00000471117 NUTM2GQ5VZR2 741 aa11.2□□□□□ -0.62
FDPS-209ENST00000471117 MARCH10Q8NA82 808 aaPredicted RBP11.2□□□□□ -0.62
FDPS-209ENST00000471117 THRAP3Q9Y2W1 955 aaKnown RBP11.2□□□□□ -0.62
FDPS-209ENST00000471117 PAPPAQ13219 1627 aa11.2□□□□□ -0.62
FDPS-209ENST00000471117 PHRF1Q9P1Y6 1649 aaKnown RBP11.2□□□□□ -0.62
FDPS-209ENST00000471117 USP6P35125 1406 aa11.19□□□□□ -0.62
FDPS-209ENST00000471117 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.19□□□□□ -0.62
FDPS-209ENST00000471117 NMRK2Q9NPI5 230 aa11.19□□□□□ -0.62
FDPS-209ENST00000471117 MORC1Q86VD1 984 aa11.18□□□□□ -0.62
FDPS-209ENST00000471117 SLC16A10Q8TF71 515 aa11.18□□□□□ -0.62
FDPS-209ENST00000471117 TTC21BQ7Z4L5 1316 aa11.17□□□□□ -0.62
FDPS-209ENST00000471117 TTC21AQ8NDW8 1320 aa11.17□□□□□ -0.62
FDPS-209ENST00000471117 TUBGCP6Q96RT7 1819 aa11.17□□□□□ -0.62
FDPS-209ENST00000471117 FYB1O15117 783 aa11.17□□□□□ -0.62
FDPS-209ENST00000471117 PDE4DIPQ5VU43 2346 aa11.17□□□□□ -0.62
FDPS-209ENST00000471117 RBM46Q8TBY0 533 aaKnown RBP11.16□□□□□ -0.62
FDPS-209ENST00000471117 GGNBP2Q9H3C7 697 aa11.16□□□□□ -0.62
FDPS-209ENST00000471117 PNPLA7Q6ZV29 1317 aa11.15□□□□□ -0.62
FDPS-209ENST00000471117 C16orf71Q8IYS4 520 aaPredicted RBP11.15□□□□□ -0.62
FDPS-209ENST00000471117 QSER1Q2KHR3 1735 aa11.15□□□□□ -0.63
FDPS-209ENST00000471117 LMO7Q8WWI1 1683 aa11.14□□□□□ -0.63
FDPS-209ENST00000471117 NME9Q86XW9 330 aa11.14□□□□□ -0.63
FDPS-209ENST00000471117 COG3Q96JB2 828 aa11.14□□□□□ -0.63
FDPS-209ENST00000471117 LRRC4BQ9NT99 713 aa11.14□□□□□ -0.63
FDPS-209ENST00000471117 GTF3C3Q9Y5Q9 886 aa11.14□□□□□ -0.63
FDPS-209ENST00000471117 PIK3C2AO00443 1686 aa11.14□□□□□ -0.63
FDPS-209ENST00000471117 MAP2P11137 1827 aaKnown RBP11.14□□□□□ -0.63
FDPS-209ENST00000471117 ZBED9Q6R2W3 1325 aa11.13□□□□□ -0.63
FDPS-209ENST00000471117 MLLT1Q03111 559 aaPredicted RBP11.13□□□□□ -0.63
FDPS-209ENST00000471117 AKT1S1Q96B36 256 aa11.13□□□□□ -0.63
FDPS-209ENST00000471117 ACSBG1Q96GR2 724 aa11.13□□□□□ -0.63
FDPS-209ENST00000471117 USP54Q70EL1 1684 aa11.13□□□□□ -0.63
FDPS-209ENST00000471117 WNK3Q9BYP7 1800 aa11.12□□□□□ -0.63
FDPS-209ENST00000471117 CRB1P82279 1406 aa11.12□□□□□ -0.63
FDPS-209ENST00000471117 ZBTB7CA1YPR0 619 aa11.12□□□□□ -0.63
FDPS-209ENST00000471117 MSH5O43196 834 aa11.12□□□□□ -0.63
FDPS-209ENST00000471117 TNNT2P45379 298 aaPredicted RBP11.12□□□□□ -0.63
FDPS-209ENST00000471117 MSL1Q68DK7 614 aa11.12□□□□□ -0.63
FDPS-209ENST00000471117 USP31Q70CQ4 1352 aa11.12□□□□□ -0.63
FDPS-209ENST00000471117 BTAF1O14981 1849 aa11.12□□□□□ -0.63
FDPS-209ENST00000471117 FSTL1Q12841 308 aa11.11□□□□□ -0.63
FDPS-209ENST00000471117 ABTB2Q8N961 1025 aa11.11□□□□□ -0.63
FDPS-209ENST00000471117 TFCP2L1Q9NZI6 479 aa11.11□□□□□ -0.63
FDPS-209ENST00000471117 INSRP06213 1382 aa11.11□□□□□ -0.63
FDPS-209ENST00000471117 COL5A2P05997 1499 aaPredicted RBP11.11□□□□□ -0.63
FDPS-209ENST00000471117 BCL9O00512 1426 aa11.1□□□□□ -0.63
FDPS-209ENST00000471117 NLRP6P59044 892 aa11.1□□□□□ -0.63
FDPS-209ENST00000471117 WDR43Q15061 677 aaKnown RBP eCLIP11.1□□□□□ -0.633e-7■■■■□ 25.4
FDPS-209ENST00000471117 NHSQ6T4R5 1651 aa11.09□□□□□ -0.63
FDPS-209ENST00000471117 KCNQ4P56696 695 aa11.09□□□□□ -0.63
FDPS-209ENST00000471117 TOM1L2Q6ZVM7 507 aa11.09□□□□□ -0.63
FDPS-209ENST00000471117 ADAMTS8Q9UP79 889 aa11.09□□□□□ -0.63
FDPS-209ENST00000471117 CD2APQ9Y5K6 639 aa11.09□□□□□ -0.63
FDPS-209ENST00000471117 FOXN1O15353 648 aa11.08□□□□□ -0.64
FDPS-209ENST00000471117 MTHFSP49914 203 aa11.08□□□□□ -0.64
FDPS-209ENST00000471117 ABHD8Q96I13 439 aa11.08□□□□□ -0.64
FDPS-209ENST00000471117 CFAP53Q96M91 514 aa11.08□□□□□ -0.64
FDPS-209ENST00000471117 USP19O94966 1318 aa11.08□□□□□ -0.64
FDPS-209ENST00000471117 IGSF1Q8N6C5 1336 aa11.08□□□□□ -0.64
FDPS-209ENST00000471117 CPDO75976 1380 aa11.05□□□□□ -0.64
FDPS-209ENST00000471117 CCDC85CA6NKD9 419 aa11.05□□□□□ -0.64
FDPS-209ENST00000471117 EXOC5O00471 708 aa11.05□□□□□ -0.64
FDPS-209ENST00000471117 SMG6Q86US8 1419 aaKnown RBP11.05□□□□□ -0.64
FDPS-209ENST00000471117 KCNH5Q8NCM2 988 aa11.05□□□□□ -0.64
FDPS-209ENST00000471117 LTN1O94822 1766 aa11.05□□□□□ -0.64
FDPS-209ENST00000471117 PPM1GO15355 546 aaPredicted RBP11.04□□□□□ -0.64
FDPS-209ENST00000471117 SOX12O15370 315 aa11.04□□□□□ -0.64
FDPS-209ENST00000471117 COL23A1Q86Y22 540 aaPredicted RBP11.04□□□□□ -0.64
FDPS-209ENST00000471117 PRDM10Q9NQV6 1147 aa11.04□□□□□ -0.64
FDPS-209ENST00000471117 POLKQ9UBT6 870 aa11.04□□□□□ -0.64
FDPS-209ENST00000471117 SALL2Q9Y467 1007 aaPredicted RBP11.04□□□□□ -0.64
FDPS-209ENST00000471117 SLIT3O75094 1523 aa11.04□□□□□ -0.64
FDPS-209ENST00000471117 FBLN1P23142 703 aa11.03□□□□□ -0.64
FDPS-209ENST00000471117 RRS1Q15050 365 aaKnown RBP11.03□□□□□ -0.64
FDPS-209ENST00000471117 RRAGCQ9HB90 399 aa11.03□□□□□ -0.64
FDPS-209ENST00000471117 EMILIN1Q9Y6C2 1016 aa11.03□□□□□ -0.64
FDPS-209ENST00000471117 CCDC146Q8IYE0 955 aa11.02□□□□□ -0.65
FDPS-209ENST00000471117 SMC1BQ8NDV3 1235 aa11.02□□□□□ -0.65
FDPS-209ENST00000471117 CDCA7Q9BWT1 371 aaPredicted RBP11.02□□□□□ -0.65
FDPS-209ENST00000471117 NFAT5O94916 1531 aa11.02□□□□□ -0.65
FDPS-209ENST00000471117 COL3A1P02461 1466 aaPredicted RBP11.01□□□□□ -0.65
FDPS-209ENST00000471117 RGPD5Q99666 1765 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms