RNA–Protein interactions for RNA: ENST00000470495.1

HOXB3-205, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 4,208 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-205ENST00000470495 CHD1LQ86WJ1 897 aa20.31■□□□□ 0.84
HOXB3-205ENST00000470495 MAP3K19Q56UN5 1328 aa20.3■□□□□ 0.84
HOXB3-205ENST00000470495 CGNQ9P2M7 1197 aaKnown RBP20.3■□□□□ 0.84
HOXB3-205ENST00000470495 TRIM6-TRIM34B2RNG4 842 aa20.29■□□□□ 0.84
HOXB3-205ENST00000470495 NFKBIBQ15653 356 aa20.29■□□□□ 0.84
HOXB3-205ENST00000470495 SECISBP2LQ93073 1101 aaKnown RBP20.28■□□□□ 0.84
HOXB3-205ENST00000470495 PTPRMP28827 1452 aa20.28■□□□□ 0.84
HOXB3-205ENST00000470495 F6X3S4 739 aa20.28■□□□□ 0.84
HOXB3-205ENST00000470495 ATF3P18847 181 aa20.27■□□□□ 0.84
HOXB3-205ENST00000470495 MRPL50Q8N5N7 158 aaKnown RBP20.27■□□□□ 0.84
HOXB3-205ENST00000470495 NLRP2Q9NX02 1062 aa20.27■□□□□ 0.83
HOXB3-205ENST00000470495 SEC24BO95487 1268 aa20.26■□□□□ 0.83
HOXB3-205ENST00000470495 GCC1Q96CN9 775 aa20.26■□□□□ 0.83
HOXB3-205ENST00000470495 TPM2P07951 284 aa20.26■□□□□ 0.83
HOXB3-205ENST00000470495 GNAT3A8MTJ3 354 aa20.26■□□□□ 0.83
HOXB3-205ENST00000470495 CCDC30Q5VVM6 783 aa20.26■□□□□ 0.83
HOXB3-205ENST00000470495 MAP7D2Q96T17 732 aa20.26■□□□□ 0.83
HOXB3-205ENST00000470495 PPLO60437 1756 aa20.25■□□□□ 0.83
HOXB3-205ENST00000470495 MTHFSDQ2M296 383 aaKnown RBP20.25■□□□□ 0.83
HOXB3-205ENST00000470495 CLTCQ00610 1675 aaKnown RBP20.25■□□□□ 0.83
HOXB3-205ENST00000470495 ZC3H6P61129 1189 aaKnown RBP20.25■□□□□ 0.83
HOXB3-205ENST00000470495 HDGFL1Q5TGJ6 251 aa20.25■□□□□ 0.83
HOXB3-205ENST00000470495 CERS3Q8IU89 383 aa20.25■□□□□ 0.83
HOXB3-205ENST00000470495 TTC21AQ8NDW8 1320 aa20.25■□□□□ 0.83
HOXB3-205ENST00000470495 ZNF530Q6P9A1 599 aaPredicted RBP20.24■□□□□ 0.83
HOXB3-205ENST00000470495 NEURL4Q96JN8 1562 aa20.24■□□□□ 0.83
HOXB3-205ENST00000470495 EYA1Q99502 592 aa20.24■□□□□ 0.83
HOXB3-205ENST00000470495 DIP2BQ9P265 1576 aa20.24■□□□□ 0.83
HOXB3-205ENST00000470495 SIRT1Q96EB6 747 aa20.24■□□□□ 0.83
HOXB3-205ENST00000470495 RILPL2Q969X0 211 aa20.23■□□□□ 0.83
HOXB3-205ENST00000470495 PLEKHG3A1L390 1219 aa20.23■□□□□ 0.83
HOXB3-205ENST00000470495 ZBTB40Q9NUA8 1239 aa20.23■□□□□ 0.83
HOXB3-205ENST00000470495 PHF23Q9BUL5 403 aaPredicted RBP20.23■□□□□ 0.83
HOXB3-205ENST00000470495 ATP7BP35670 1465 aa20.21■□□□□ 0.83
HOXB3-205ENST00000470495 FRAT2O75474 233 aaPredicted RBP20.21■□□□□ 0.83
HOXB3-205ENST00000470495 HDAC1Q13547 482 aaPredicted RBP20.21■□□□□ 0.83
HOXB3-205ENST00000470495 PREX1Q8TCU6 1659 aa20.21■□□□□ 0.83
HOXB3-205ENST00000470495 ZNF330Q9Y3S2 320 aaPredicted RBP20.2■□□□□ 0.82
HOXB3-205ENST00000470495 RAPGEF4Q8WZA2 1011 aa20.2■□□□□ 0.82
HOXB3-205ENST00000470495 ARHGEF40Q8TER5 1519 aa20.2■□□□□ 0.82
HOXB3-205ENST00000470495 SMARCA5O60264 1052 aaPredicted RBP20.19■□□□□ 0.82
HOXB3-205ENST00000470495 AIMP1Q12904 312 aaKnown RBP20.19■□□□□ 0.82
HOXB3-205ENST00000470495 PLEKHO1Q53GL0 409 aaPredicted RBP20.19■□□□□ 0.82
HOXB3-205ENST00000470495 SAMD1Q6SPF0 538 aaPredicted RBP20.19■□□□□ 0.82
HOXB3-205ENST00000470495 FLT4P35916 1363 aa20.19■□□□□ 0.82
HOXB3-205ENST00000470495 PLEKHG1Q9ULL1 1385 aa20.19■□□□□ 0.82
HOXB3-205ENST00000470495 BCCIPQ9P287 314 aaKnown RBP eCLIP20.19■□□□□ 0.82
HOXB3-205ENST00000470495 NOL8Q76FK4 1167 aaKnown RBP20.18■□□□□ 0.82
HOXB3-205ENST00000470495 MYOM1P52179 1685 aa20.18■□□□□ 0.82
HOXB3-205ENST00000470495 RICTORQ6R327 1708 aa20.18■□□□□ 0.82
HOXB3-205ENST00000470495 UBTFL1P0CB47 393 aaPredicted RBP20.18■□□□□ 0.82
HOXB3-205ENST00000470495 RBM25P49756 843 aaKnown RBP20.17■□□□□ 0.82
HOXB3-205ENST00000470495 ARHGAP45Q92619 1136 aa20.17■□□□□ 0.82
HOXB3-205ENST00000470495 HDAC5Q9UQL6 1122 aa20.17■□□□□ 0.82
HOXB3-205ENST00000470495 R3HCC1Q9Y3T6 440 aaKnown RBP20.17■□□□□ 0.82
HOXB3-205ENST00000470495 GNAI2P04899 355 aa20.17■□□□□ 0.82
HOXB3-205ENST00000470495 MPRIPQ6WCQ1 1025 aa20.17■□□□□ 0.82
HOXB3-205ENST00000470495 C9orf78Q9NZ63 289 aaPredicted RBP20.17■□□□□ 0.82
HOXB3-205ENST00000470495 FAM135BQ49AJ0 1406 aa20.17■□□□□ 0.82
HOXB3-205ENST00000470495 GOLGA6L22H0YM25 854 aa20.16■□□□□ 0.82
HOXB3-205ENST00000470495 ZC3H13Q5T200 1668 aaKnown RBP20.16■□□□□ 0.82
HOXB3-205ENST00000470495 CDC45O75419 566 aa20.16■□□□□ 0.82
HOXB3-205ENST00000470495 TMEM131LA2VDJ0 1609 aa20.16■□□□□ 0.82
HOXB3-205ENST00000470495 CCT4P50991 539 aaKnown RBP20.16■□□□□ 0.82
HOXB3-205ENST00000470495 TAF7Q15545 349 aaPredicted RBP20.16■□□□□ 0.82
HOXB3-205ENST00000470495 KIAA1211Q6ZU35 1233 aa20.16■□□□□ 0.82
HOXB3-205ENST00000470495 TNNT1P13805 278 aa20.16■□□□□ 0.82
HOXB3-205ENST00000470495 EXOC6BQ9Y2D4 811 aa20.16■□□□□ 0.82
HOXB3-205ENST00000470495 KCNH5Q8NCM2 988 aa20.15■□□□□ 0.82
HOXB3-205ENST00000470495 MEIS3Q99687 375 aa20.15■□□□□ 0.82
HOXB3-205ENST00000470495 SIGLEC1Q9BZZ2 1709 aa20.15■□□□□ 0.82
HOXB3-205ENST00000470495 GNAI3P08754 354 aa20.15■□□□□ 0.82
HOXB3-205ENST00000470495 HOXC9P31274 260 aa20.15■□□□□ 0.82
HOXB3-205ENST00000470495 LRRC59Q96AG4 307 aaKnown RBP20.15■□□□□ 0.82
HOXB3-205ENST00000470495 ZBTB7BO15156 539 aaPredicted RBP20.14■□□□□ 0.82
HOXB3-205ENST00000470495 NUCB1Q02818 461 aa20.14■□□□□ 0.81
HOXB3-205ENST00000470495 AGLP35573 1532 aa20.13■□□□□ 0.81
HOXB3-205ENST00000470495 BTBD11A6QL63 1104 aa20.13■□□□□ 0.81
HOXB3-205ENST00000470495 MCCP23508 829 aa20.13■□□□□ 0.81
HOXB3-205ENST00000470495 RPAP2Q8IXW5 612 aaPredicted RBP20.13■□□□□ 0.81
HOXB3-205ENST00000470495 AATKQ6ZMQ8 1374 aa20.13■□□□□ 0.81
HOXB3-205ENST00000470495 KCNJ4P48050 445 aa20.13■□□□□ 0.81
HOXB3-205ENST00000470495 SMC5Q8IY18 1101 aa20.13■□□□□ 0.81
HOXB3-205ENST00000470495 ORAI2Q96SN7 254 aa20.12■□□□□ 0.81
HOXB3-205ENST00000470495 FLIIQ13045 1269 aa20.12■□□□□ 0.81
HOXB3-205ENST00000470495 SURF6O75683 361 aaKnown RBP20.11■□□□□ 0.81
HOXB3-205ENST00000470495 NLRP1Q9C000 1473 aa20.11■□□□□ 0.81
HOXB3-205ENST00000470495 ANXA1P04083 346 aa20.11■□□□□ 0.81
HOXB3-205ENST00000470495 INTS3Q68E01 1043 aaKnown RBP20.11■□□□□ 0.81
HOXB3-205ENST00000470495 KRT28Q7Z3Y7 464 aa20.11■□□□□ 0.81
HOXB3-205ENST00000470495 CHL1O00533 1208 aa20.1■□□□□ 0.81
HOXB3-205ENST00000470495 TTC5Q8N0Z6 440 aa20.1■□□□□ 0.81
HOXB3-205ENST00000470495 ARHGEF28Q8N1W1 1705 aaKnown RBP20.1■□□□□ 0.81
HOXB3-205ENST00000470495 PNPLA6Q8IY17 1366 aa20.1■□□□□ 0.81
HOXB3-205ENST00000470495 G2E3Q7L622 706 aa20.1■□□□□ 0.81
HOXB3-205ENST00000470495 TBC1D32Q96NH3 1257 aa20.1■□□□□ 0.81
HOXB3-205ENST00000470495 CHMP3Q9Y3E7 222 aa20.1■□□□□ 0.81
HOXB3-205ENST00000470495 USP6P35125 1406 aa20.1■□□□□ 0.81
HOXB3-205ENST00000470495 CLGNO14967 610 aa20.1■□□□□ 0.81
HOXB3-205ENST00000470495 TBC1D2Q9BYX2 928 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms