RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 EXOC6BQ9Y2D4 811 aa15.19■□□□□ 0.02
USP11-206ENST00000469080 ZBTB22O15209 634 aa15.19■□□□□ 0.02
USP11-206ENST00000469080 HSP90AB1P08238 724 aaKnown RBP15.19■□□□□ 0.02
USP11-206ENST00000469080 CHRNA2Q15822 529 aa15.19■□□□□ 0.02
USP11-206ENST00000469080 EYA1Q99502 592 aa15.19■□□□□ 0.02
USP11-206ENST00000469080 MAP4K4O95819 1239 aaPredicted RBP15.19■□□□□ 0.02
USP11-206ENST00000469080 TEFQ10587 303 aa15.19■□□□□ 0.02
USP11-206ENST00000469080 RILPL2Q969X0 211 aa15.19■□□□□ 0.02
USP11-206ENST00000469080 QRICH2Q9H0J4 1663 aa15.18■□□□□ 0.02
USP11-206ENST00000469080 SBNO2Q9Y2G9 1366 aa15.18■□□□□ 0.02
USP11-206ENST00000469080 MRE11P49959 708 aa15.18■□□□□ 0.02
USP11-206ENST00000469080 PHF8Q9UPP1 1060 aa15.18■□□□□ 0.02
USP11-206ENST00000469080 INSRP06213 1382 aa15.17■□□□□ 0.02
USP11-206ENST00000469080 IQGAP1P46940 1657 aa15.17■□□□□ 0.02
USP11-206ENST00000469080 CAMSAP1Q5T5Y3 1602 aa15.17■□□□□ 0.02
USP11-206ENST00000469080 CLTCQ00610 1675 aaKnown RBP15.17■□□□□ 0.02
USP11-206ENST00000469080 JARID2Q92833 1246 aaPredicted RBP15.17■□□□□ 0.02
USP11-206ENST00000469080 TMEM2Q9UHN6 1383 aa15.17■□□□□ 0.02
USP11-206ENST00000469080 LMTK2Q8IWU2 1503 aa15.17■□□□□ 0.02
USP11-206ENST00000469080 MEIS3Q99687 375 aa15.16■□□□□ 0.02
USP11-206ENST00000469080 C22orf23Q9BZE7 217 aa15.16■□□□□ 0.02
USP11-206ENST00000469080 PPP6R1Q9UPN7 881 aa15.16■□□□□ 0.02
USP11-206ENST00000469080 A2ML1A8K2U0 1454 aa15.16■□□□□ 0.02
USP11-206ENST00000469080 IL1RAPL2Q9NP60 686 aa15.16■□□□□ 0.02
USP11-206ENST00000469080 DTNBO60941 627 aa15.15■□□□□ 0.02
USP11-206ENST00000469080 MSNP26038 577 aaKnown RBP15.15■□□□□ 0.02
USP11-206ENST00000469080 OTUD7AQ8TE49 926 aaPredicted RBP15.15■□□□□ 0.02
USP11-206ENST00000469080 CFAP44Q96MT7 982 aa15.15■□□□□ 0.02
USP11-206ENST00000469080 MYO5BQ9ULV0 1848 aa15.15■□□□□ 0.02
USP11-206ENST00000469080 UTP14CQ5TAP6 766 aaKnown RBP15.15■□□□□ 0.02
USP11-206ENST00000469080 CERS3Q8IU89 383 aa15.15■□□□□ 0.02
USP11-206ENST00000469080 UQCRHLA0A096LP55 91 aa15.14■□□□□ 0.01
USP11-206ENST00000469080 UQCRHP07919 91 aa15.14■□□□□ 0.01
USP11-206ENST00000469080 GRPEL1Q9HAV7 217 aa15.14■□□□□ 0.01
USP11-206ENST00000469080 CGNQ9P2M7 1197 aaKnown RBP15.14■□□□□ 0.01
USP11-206ENST00000469080 ZNF530Q6P9A1 599 aaPredicted RBP15.14■□□□□ 0.01
USP11-206ENST00000469080 NEXMIFQ5QGS0 1516 aa15.14■□□□□ 0.01
USP11-206ENST00000469080 ADGRB1O14514 1584 aa15.14■□□□□ 0.01
USP11-206ENST00000469080 ARHGEF40Q8TER5 1519 aa15.14■□□□□ 0.01
USP11-206ENST00000469080 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.13■□□□□ 0.01
USP11-206ENST00000469080 CHD1LQ86WJ1 897 aa15.13■□□□□ 0.01
USP11-206ENST00000469080 HSCBQ8IWL3 235 aa15.13■□□□□ 0.01
USP11-206ENST00000469080 RBM42Q9BTD8 480 aaKnown RBP15.13■□□□□ 0.01
USP11-206ENST00000469080 PIK3C2BO00750 1634 aa15.13■□□□□ 0.01
USP11-206ENST00000469080 NSD2O96028 1365 aa15.13■□□□□ 0.01
USP11-206ENST00000469080 API5Q9BZZ5 524 aaKnown RBP15.13■□□□□ 0.01
USP11-206ENST00000469080 HDGFL1Q5TGJ6 251 aa15.13■□□□□ 0.01
USP11-206ENST00000469080 MRPL50Q8N5N7 158 aaKnown RBP15.13■□□□□ 0.01
USP11-206ENST00000469080 ALKQ9UM73 1620 aa15.13■□□□□ 0.01
USP11-206ENST00000469080 ARHGAP31Q2M1Z3 1444 aa15.12■□□□□ 0.01
USP11-206ENST00000469080 CBX1P83916 185 aa15.12■□□□□ 0.01
USP11-206ENST00000469080 CCDC27Q2M243 656 aa15.12■□□□□ 0.01
USP11-206ENST00000469080 MYL6BP14649 208 aa15.12■□□□□ 0.01
USP11-206ENST00000469080 FSD2A1L4K1 749 aa15.11■□□□□ 0.01
USP11-206ENST00000469080 TEX2Q8IWB9 1127 aa15.11■□□□□ 0.01
USP11-206ENST00000469080 LGR6Q9HBX8 967 aa15.11■□□□□ 0.01
USP11-206ENST00000469080 IFT57Q9NWB7 429 aa15.11■□□□□ 0.01
USP11-206ENST00000469080 CHMP3Q9Y3E7 222 aa15.11■□□□□ 0.01
USP11-206ENST00000469080 C1orf141Q5JVX7 400 aa15.11■□□□□ 0.01
USP11-206ENST00000469080 SLC39A6Q13433 755 aa15.11■□□□□ 0.01
USP11-206ENST00000469080 STRN4Q9NRL3 753 aa15.11■□□□□ 0.01
USP11-206ENST00000469080 ZSCAN20P17040 1043 aaPredicted RBP15.1■□□□□ 0.01
USP11-206ENST00000469080 IRX3P78415 501 aaPredicted RBP15.1■□□□□ 0.01
USP11-206ENST00000469080 PTPRMP28827 1452 aa15.1■□□□□ 0.01
USP11-206ENST00000469080 KCNQ3O43525 872 aa15.1■□□□□ 0.01
USP11-206ENST00000469080 ZBTB40Q9NUA8 1239 aa15.1■□□□□ 0.01
USP11-206ENST00000469080 MTERF4Q7Z6M4 381 aaKnown RBP15.09■□□□□ 0.01
USP11-206ENST00000469080 PHAXQ9H814 394 aaKnown RBP15.09■□□□□ 0.01
USP11-206ENST00000469080 AGLP35573 1532 aa15.09■□□□□ 0.01
USP11-206ENST00000469080 ATF3P18847 181 aa15.09■□□□□ 0.01
USP11-206ENST00000469080 IGSF3O75054 1194 aa15.09■□□□□ 0.01
USP11-206ENST00000469080 OFD1O75665 1012 aa15.09■□□□□ 0.01
USP11-206ENST00000469080 GNAT3A8MTJ3 354 aa15.08■□□□□ 0
USP11-206ENST00000469080 TRAK2O60296 914 aa15.07■□□□□ 0
USP11-206ENST00000469080 DDX54Q8TDD1 881 aaKnown RBP15.07■□□□□ 0
USP11-206ENST00000469080 SIL1Q9H173 461 aa15.07■□□□□ 0
USP11-206ENST00000469080 KIF20AO95235 890 aa15.07■□□□□ 0
USP11-206ENST00000469080 LARP6Q9BRS8 491 aaKnown RBP15.07■□□□□ 0
USP11-206ENST00000469080 MYOM1P52179 1685 aa15.06■□□□□ 0
USP11-206ENST00000469080 ZBTB7BO15156 539 aaPredicted RBP15.06■□□□□ 0
USP11-206ENST00000469080 NBPF6Q5VWK0 638 aa15.06■□□□□ 0
USP11-206ENST00000469080 NUTM1Q86Y26 1132 aa15.06■□□□□ 0
USP11-206ENST00000469080 GAS2L2Q8NHY3 880 aa15.06■□□□□ 0
USP11-206ENST00000469080 NBPF4Q96M43 638 aa15.06■□□□□ 0
USP11-206ENST00000469080 PUS7Q96PZ0 661 aaKnown RBP15.06■□□□□ 0
USP11-206ENST00000469080 TBC1D2Q9BYX2 928 aa15.06■□□□□ 0
USP11-206ENST00000469080 HOXC9P31274 260 aa15.06■□□□□ 0
USP11-206ENST00000469080 PREX1Q8TCU6 1659 aa15.06■□□□□ 0
USP11-206ENST00000469080 SURF6O75683 361 aaKnown RBP15.05■□□□□ 0
USP11-206ENST00000469080 EDC4Q6P2E9 1401 aaKnown RBP15.05■□□□□ 0
USP11-206ENST00000469080 SYTL4Q96C24 671 aaPredicted RBP15.05■□□□□ -0
USP11-206ENST00000469080 C9orf78Q9NZ63 289 aaPredicted RBP15.05■□□□□ -0
USP11-206ENST00000469080 NINLQ9Y2I6 1382 aa15.05■□□□□ -0
USP11-206ENST00000469080 CCDC94Q9BW85 323 aaPredicted RBP15.05■□□□□ -0
USP11-206ENST00000469080 PPLO60437 1756 aa15.05■□□□□ -0
USP11-206ENST00000469080 BTBD11A6QL63 1104 aa15.04■□□□□ -0
USP11-206ENST00000469080 KRT28Q7Z3Y7 464 aa15.04■□□□□ -0
USP11-206ENST00000469080 TBX22Q9Y458 520 aa15.04■□□□□ -0
USP11-206ENST00000469080 LRRFIP2Q9Y608 721 aaKnown RBP15.04■□□□□ -0
USP11-206ENST00000469080 LAMC1P11047 1609 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms