RNA–Protein interactions for RNA: ENST00000468822.5

SRRM1-207, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 768 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-207ENST00000468822 FAM208AQ9UK61 1670 aaKnown RBP21.95■■□□□ 1.1
SRRM1-207ENST00000468822 SYTL4Q96C24 671 aaPredicted RBP21.95■■□□□ 1.1
SRRM1-207ENST00000468822 TERF2IPQ9NYB0 399 aa21.95■■□□□ 1.1
SRRM1-207ENST00000468822 SHANK3Q9BYB0 1731 aa21.94■■□□□ 1.1
SRRM1-207ENST00000468822 MAP3K19Q56UN5 1328 aa21.94■■□□□ 1.1
SRRM1-207ENST00000468822 ANKRD36BQ8N2N9 1353 aa21.94■■□□□ 1.1
SRRM1-207ENST00000468822 DOT1LQ8TEK3 1739 aa21.94■■□□□ 1.1
SRRM1-207ENST00000468822 MEGF6O75095 1541 aa21.93■■□□□ 1.1
SRRM1-207ENST00000468822 TFCP2L1Q9NZI6 479 aa21.93■■□□□ 1.1
SRRM1-207ENST00000468822 RGPD2P0DJD1 1756 aa21.92■■□□□ 1.1
SRRM1-207ENST00000468822 LY75O60449 1722 aa21.92■■□□□ 1.1
SRRM1-207ENST00000468822 POLD1P28340 1107 aa21.92■■□□□ 1.1
SRRM1-207ENST00000468822 HOXC9P31274 260 aa21.92■■□□□ 1.1
SRRM1-207ENST00000468822 PELP1Q8IZL8 1130 aaKnown RBP21.91■■□□□ 1.1
SRRM1-207ENST00000468822 TESK2Q96S53 571 aa21.9■■□□□ 1.1
SRRM1-207ENST00000468822 ZCRB1Q8TBF4 217 aaKnown RBP21.89■■□□□ 1.09
SRRM1-207ENST00000468822 PUS7Q96PZ0 661 aaKnown RBP21.89■■□□□ 1.09
SRRM1-207ENST00000468822 YBX3P16989 372 aaKnown RBP eCLIP21.88■■□□□ 1.09
SRRM1-207ENST00000468822 COL23A1Q86Y22 540 aaPredicted RBP21.87■■□□□ 1.09
SRRM1-207ENST00000468822 COG3Q96JB2 828 aa21.87■■□□□ 1.09
SRRM1-207ENST00000468822 CCNL1Q9UK58 526 aaPredicted RBP21.87■■□□□ 1.09
SRRM1-207ENST00000468822 AMPHP49418 695 aa21.86■■□□□ 1.09
SRRM1-207ENST00000468822 NBPF6Q5VWK0 638 aa21.86■■□□□ 1.09
SRRM1-207ENST00000468822 NBPF4Q96M43 638 aa21.86■■□□□ 1.09
SRRM1-207ENST00000468822 USHBP1Q8N6Y0 703 aa21.85■■□□□ 1.09
SRRM1-207ENST00000468822 RRS1Q15050 365 aaKnown RBP21.84■■□□□ 1.09
SRRM1-207ENST00000468822 MSL1Q68DK7 614 aa21.84■■□□□ 1.09
SRRM1-207ENST00000468822 ST20-MTHFSA0A0A6YYL1 179 aa21.83■■□□□ 1.09
SRRM1-207ENST00000468822 GIGYF1O75420 1035 aaPredicted RBP21.83■■□□□ 1.09
SRRM1-207ENST00000468822 RTL1A6NKG5 1358 aa21.8■■□□□ 1.08
SRRM1-207ENST00000468822 USP47Q96K76 1375 aa21.8■■□□□ 1.08
SRRM1-207ENST00000468822 FYB1O15117 783 aa21.79■■□□□ 1.08
SRRM1-207ENST00000468822 GGNBP2Q9H3C7 697 aa21.79■■□□□ 1.08
SRRM1-207ENST00000468822 TONSLQ96HA7 1378 aa21.78■■□□□ 1.08
SRRM1-207ENST00000468822 C5P01031 1676 aa21.77■■□□□ 1.08
SRRM1-207ENST00000468822 AMIGO3Q86WK7 504 aa21.77■■□□□ 1.08
SRRM1-207ENST00000468822 GRIN3BO60391 1043 aa21.76■■□□□ 1.07
SRRM1-207ENST00000468822 HSP90AB2PQ58FF8 381 aa21.76■■□□□ 1.07
SRRM1-207ENST00000468822 RAPGEF4Q8WZA2 1011 aa21.75■■□□□ 1.07
SRRM1-207ENST00000468822 CGNL1Q0VF96 1302 aa21.75■■□□□ 1.07
SRRM1-207ENST00000468822 ATP10DQ9P241 1426 aa21.74■■□□□ 1.07
SRRM1-207ENST00000468822 SMIM5Q71RC9 77 aa21.74■■□□□ 1.07
SRRM1-207ENST00000468822 PALLDQ8WX93 1383 aa21.74■■□□□ 1.07
SRRM1-207ENST00000468822 TOGARAM1Q9Y4F4 1720 aa21.73■■□□□ 1.07
SRRM1-207ENST00000468822 CYP27B1O15528 508 aa21.73■■□□□ 1.07
SRRM1-207ENST00000468822 TAF1LQ8IZX4 1826 aa21.73■■□□□ 1.07
SRRM1-207ENST00000468822 TATP17735 454 aaPredicted RBP21.72■■□□□ 1.07
SRRM1-207ENST00000468822 MPRIPQ6WCQ1 1025 aa21.72■■□□□ 1.07
SRRM1-207ENST00000468822 INSRP06213 1382 aa21.72■■□□□ 1.07
SRRM1-207ENST00000468822 CD2APQ9Y5K6 639 aa21.71■■□□□ 1.07
SRRM1-207ENST00000468822 PCDH11XQ9BZA7 1347 aa21.71■■□□□ 1.07
SRRM1-207ENST00000468822 PCDH11YQ9BZA8 1340 aa21.71■■□□□ 1.07
SRRM1-207ENST00000468822 SMG6Q86US8 1419 aaKnown RBP21.71■■□□□ 1.07
SRRM1-207ENST00000468822 C4BP0C0L5 1744 aa21.69■■□□□ 1.06
SRRM1-207ENST00000468822 ADCY9O60503 1353 aa21.68■■□□□ 1.06
SRRM1-207ENST00000468822 FLT4P35916 1363 aa21.67■■□□□ 1.06
SRRM1-207ENST00000468822 WWC3Q9ULE0 1092 aa21.67■■□□□ 1.06
SRRM1-207ENST00000468822 ITGB4P16144 1822 aa21.66■■□□□ 1.06
SRRM1-207ENST00000468822 FLAD1Q8NFF5 587 aa21.66■■□□□ 1.06
SRRM1-207ENST00000468822 PIGBQ92521 554 aa21.66■■□□□ 1.06
SRRM1-207ENST00000468822 EMILIN1Q9Y6C2 1016 aa21.66■■□□□ 1.06
SRRM1-207ENST00000468822 CARD14Q9BXL6 1004 aa21.65■■□□□ 1.06
SRRM1-207ENST00000468822 UBR3Q6ZT12 1888 aa21.64■■□□□ 1.06
SRRM1-207ENST00000468822 KIF20BQ96Q89 1820 aa21.64■■□□□ 1.06
SRRM1-207ENST00000468822 PKD1L3Q7Z443 1732 aa21.64■■□□□ 1.06
SRRM1-207ENST00000468822 PHF14O94880 888 aa21.64■■□□□ 1.05
SRRM1-207ENST00000468822 IFFO2Q5TF58 517 aa21.64■■□□□ 1.05
SRRM1-207ENST00000468822 NCAPD2Q15021 1401 aa21.63■■□□□ 1.05
SRRM1-207ENST00000468822 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.63■■□□□ 1.05
SRRM1-207ENST00000468822 SLC24A1O60721 1099 aa21.63■■□□□ 1.05
SRRM1-207ENST00000468822 TMF1P82094 1093 aa21.63■■□□□ 1.05
SRRM1-207ENST00000468822 LINC00116Q8NCU8 138 aa21.63■■□□□ 1.05
SRRM1-207ENST00000468822 ZNF526Q8TF50 670 aaPredicted RBP21.63■■□□□ 1.05
SRRM1-207ENST00000468822 AK7Q96M32 723 aa21.63■■□□□ 1.05
SRRM1-207ENST00000468822 MAP2P11137 1827 aaKnown RBP21.63■■□□□ 1.05
SRRM1-207ENST00000468822 KIF24Q5T7B8 1368 aa21.62■■□□□ 1.05
SRRM1-207ENST00000468822 IGSF1Q8N6C5 1336 aa21.62■■□□□ 1.05
SRRM1-207ENST00000468822 SMARCC1Q92922 1105 aaPredicted RBP21.62■■□□□ 1.05
SRRM1-207ENST00000468822 GPBP1L1Q9HC44 474 aaPredicted RBP21.62■■□□□ 1.05
SRRM1-207ENST00000468822 NKX1-1Q15270 411 aaPredicted RBP21.61■■□□□ 1.05
SRRM1-207ENST00000468822 ITPK1Q13572 414 aa21.59■■□□□ 1.05
SRRM1-207ENST00000468822 LOC102724428A0A0B4J2F2 783 aa21.58■■□□□ 1.05
SRRM1-207ENST00000468822 SIK1P57059 783 aa21.58■■□□□ 1.05
SRRM1-207ENST00000468822 ASAP1Q9ULH1 1129 aa21.58■■□□□ 1.05
SRRM1-207ENST00000468822 NSD3Q9BZ95 1437 aa21.57■■□□□ 1.04
SRRM1-207ENST00000468822 SSFA2P28290 1259 aa21.57■■□□□ 1.04
SRRM1-207ENST00000468822 PPM1GO15355 546 aaPredicted RBP21.56■■□□□ 1.04
SRRM1-207ENST00000468822 ANKRD26Q9UPS8 1709 aa21.55■■□□□ 1.04
SRRM1-207ENST00000468822 HSPA6P17066 643 aa21.55■■□□□ 1.04
SRRM1-207ENST00000468822 EYA1Q99502 592 aa21.55■■□□□ 1.04
SRRM1-207ENST00000468822 HMGB2P26583 209 aaKnown RBP21.54■■□□□ 1.04
SRRM1-207ENST00000468822 SPG7Q9UQ90 795 aa21.54■■□□□ 1.04
SRRM1-207ENST00000468822 WASHC2AQ641Q2 1341 aa21.54■■□□□ 1.04
SRRM1-207ENST00000468822 GNPATO15228 680 aa21.53■■□□□ 1.04
SRRM1-207ENST00000468822 ATG3Q9NT62 314 aa21.53■■□□□ 1.04
SRRM1-207ENST00000468822 TMOD3Q9NYL9 352 aa21.53■■□□□ 1.04
SRRM1-207ENST00000468822 KIF3CO14782 793 aa21.52■■□□□ 1.04
SRRM1-207ENST00000468822 MMP10P09238 476 aa21.51■■□□□ 1.03
SRRM1-207ENST00000468822 PHKG2P15735 406 aa21.51■■□□□ 1.03
SRRM1-207ENST00000468822 ATP6V1AP38606 617 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 120.3 ms