RNA–Protein interactions for RNA: ENST00000467681.5

SSBP1-206, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 630 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-206ENST00000467681 AEBP1Q8IUX7 1158 aa18.31■□□□□ 0.52
SSBP1-206ENST00000467681 OVOS2A0A0G2JMS6 1433 aa18.31■□□□□ 0.52
SSBP1-206ENST00000467681 BCL11BQ9C0K0 894 aaPredicted RBP18.3■□□□□ 0.52
SSBP1-206ENST00000467681 SPG7Q9UQ90 795 aa18.3■□□□□ 0.52
SSBP1-206ENST00000467681 NUDCQ9Y266 331 aa18.29■□□□□ 0.52
SSBP1-206ENST00000467681 KAT6BQ8WYB5 2073 aa18.28■□□□□ 0.52
SSBP1-206ENST00000467681 CYP27B1O15528 508 aa18.28■□□□□ 0.52
SSBP1-206ENST00000467681 PLEKHO1Q53GL0 409 aaPredicted RBP18.28■□□□□ 0.52
SSBP1-206ENST00000467681 DEFB132Q7Z7B7 95 aa18.28■□□□□ 0.52
SSBP1-206ENST00000467681 PRKRIP1Q9H875 184 aaPredicted RBP18.28■□□□□ 0.52
SSBP1-206ENST00000467681 LRRC37A3O60309 1634 aa18.27■□□□□ 0.52
SSBP1-206ENST00000467681 U2SURPO15042 1029 aaKnown RBP18.27■□□□□ 0.52
SSBP1-206ENST00000467681 APBA3O96018 575 aa18.27■□□□□ 0.52
SSBP1-206ENST00000467681 HMOX1P09601 288 aa18.27■□□□□ 0.52
SSBP1-206ENST00000467681 AMOTQ4VCS5 1084 aa18.27■□□□□ 0.52
SSBP1-206ENST00000467681 PTF1AQ7RTS3 328 aa18.27■□□□□ 0.52
SSBP1-206ENST00000467681 KDRP35968 1356 aa18.27■□□□□ 0.51
SSBP1-206ENST00000467681 PCDH11XQ9BZA7 1347 aa18.26■□□□□ 0.51
SSBP1-206ENST00000467681 PCDH11YQ9BZA8 1340 aa18.26■□□□□ 0.51
SSBP1-206ENST00000467681 KCNQ2O43526 872 aa18.26■□□□□ 0.51
SSBP1-206ENST00000467681 BAG6P46379 1132 aa18.26■□□□□ 0.51
SSBP1-206ENST00000467681 NKX1-1Q15270 411 aaPredicted RBP18.26■□□□□ 0.51
SSBP1-206ENST00000467681 WNK3Q9BYP7 1800 aa18.26■□□□□ 0.51
SSBP1-206ENST00000467681 ACSBG1Q96GR2 724 aa18.25■□□□□ 0.51
SSBP1-206ENST00000467681 PLEKHG2Q9H7P9 1386 aa18.25■□□□□ 0.51
SSBP1-206ENST00000467681 COL3A1P02461 1466 aaPredicted RBP18.25■□□□□ 0.51
SSBP1-206ENST00000467681 MYBBP1AQ9BQG0 1328 aaKnown RBP18.24■□□□□ 0.51
SSBP1-206ENST00000467681 PRIM1P49642 420 aaKnown RBP18.24■□□□□ 0.51
SSBP1-206ENST00000467681 EN1Q05925 392 aaPredicted RBP18.24■□□□□ 0.51
SSBP1-206ENST00000467681 IFNL2Q8IZJ0 200 aa18.24■□□□□ 0.51
SSBP1-206ENST00000467681 U2AF1L5P0DN76 240 aaPredicted RBP18.23■□□□□ 0.51
SSBP1-206ENST00000467681 PHKG2P15735 406 aa18.23■□□□□ 0.51
SSBP1-206ENST00000467681 U2AF1Q01081 240 aaKnown RBP eCLIP18.23■□□□□ 0.511e-7■■■■■ 28.2
SSBP1-206ENST00000467681 CAMKK2Q96RR4 588 aa18.23■□□□□ 0.51
SSBP1-206ENST00000467681 PLSCR1O15162 318 aa18.22■□□□□ 0.51
SSBP1-206ENST00000467681 FCHSD2O94868 740 aa18.21■□□□□ 0.51
SSBP1-206ENST00000467681 ZNF530Q6P9A1 599 aaPredicted RBP18.21■□□□□ 0.51
SSBP1-206ENST00000467681 HSP90AB1P08238 724 aaKnown RBP18.19■□□□□ 0.5
SSBP1-206ENST00000467681 EZH2Q15910 746 aaKnown RBP18.19■□□□□ 0.5
SSBP1-206ENST00000467681 RSPH6AQ9H0K4 717 aa18.19■□□□□ 0.5
SSBP1-206ENST00000467681 RGPD1P0DJD0 1748 aa18.18■□□□□ 0.5
SSBP1-206ENST00000467681 MTHFSDQ2M296 383 aaKnown RBP18.18■□□□□ 0.5
SSBP1-206ENST00000467681 SYTL4Q96C24 671 aaPredicted RBP18.18■□□□□ 0.5
SSBP1-206ENST00000467681 EP400Q96L91 3159 aa18.18■□□□□ 0.5
SSBP1-206ENST00000467681 PRKAR2BP31323 418 aa18.17■□□□□ 0.5
SSBP1-206ENST00000467681 C1orf141Q5JVX7 400 aa18.17■□□□□ 0.5
SSBP1-206ENST00000467681 DCAF5Q96JK2 942 aa18.17■□□□□ 0.5
SSBP1-206ENST00000467681 PHACTR3Q96KR7 559 aa18.17■□□□□ 0.5
SSBP1-206ENST00000467681 ANP32CO43423 234 aa18.16■□□□□ 0.5
SSBP1-206ENST00000467681 AKAP4Q5JQC9 854 aa18.16■□□□□ 0.5
SSBP1-206ENST00000467681 PROM2Q8N271 834 aa18.16■□□□□ 0.5
SSBP1-206ENST00000467681 SBF2Q86WG5 1849 aa18.15■□□□□ 0.5
SSBP1-206ENST00000467681 ERVV-2B6SEH9 535 aa18.15■□□□□ 0.5
SSBP1-206ENST00000467681 MPRIPQ6WCQ1 1025 aa18.15■□□□□ 0.5
SSBP1-206ENST00000467681 PIGBQ92521 554 aa18.14■□□□□ 0.49
SSBP1-206ENST00000467681 PKD1L3Q7Z443 1732 aa18.13■□□□□ 0.49
SSBP1-206ENST00000467681 SHANK3Q9BYB0 1731 aa18.13■□□□□ 0.49
SSBP1-206ENST00000467681 GAS2L2Q8NHY3 880 aa18.13■□□□□ 0.49
SSBP1-206ENST00000467681 PNNQ9H307 717 aaKnown RBP18.13■□□□□ 0.49
SSBP1-206ENST00000467681 TXNRD1Q16881 649 aa18.12■□□□□ 0.49
SSBP1-206ENST00000467681 PLEKHF1Q96S99 279 aa18.11■□□□□ 0.49
SSBP1-206ENST00000467681 LGR6Q9HBX8 967 aa18.11■□□□□ 0.49
SSBP1-206ENST00000467681 TMOD3Q9NYL9 352 aa18.11■□□□□ 0.49
SSBP1-206ENST00000467681 RNMTO43148 476 aaKnown RBP18.1■□□□□ 0.49
SSBP1-206ENST00000467681 CABP4P57796 275 aa18.1■□□□□ 0.49
SSBP1-206ENST00000467681 TNS1Q9HBL0 1735 aaKnown RBP18.09■□□□□ 0.49
SSBP1-206ENST00000467681 GNAT3A8MTJ3 354 aa18.09■□□□□ 0.49
SSBP1-206ENST00000467681 SMARCC1Q92922 1105 aaPredicted RBP18.09■□□□□ 0.49
SSBP1-206ENST00000467681 NEFMP07197 916 aa18.08■□□□□ 0.48
SSBP1-206ENST00000467681 CCDC184Q52MB2 194 aa18.08■□□□□ 0.48
SSBP1-206ENST00000467681 SLC27A3Q5K4L6 730 aa18.08■□□□□ 0.48
SSBP1-206ENST00000467681 NFATC2IPQ8NCF5 419 aa18.08■□□□□ 0.48
SSBP1-206ENST00000467681 IL17REQ8NFR9 667 aa18.08■□□□□ 0.48
SSBP1-206ENST00000467681 ADAMTS8Q9UP79 889 aa18.08■□□□□ 0.48
SSBP1-206ENST00000467681 KDM6AO15550 1401 aaPredicted RBP18.07■□□□□ 0.48
SSBP1-206ENST00000467681 NHSQ6T4R5 1651 aa18.07■□□□□ 0.48
SSBP1-206ENST00000467681 WDR43Q15061 677 aaKnown RBP eCLIP18.07■□□□□ 0.48
SSBP1-206ENST00000467681 NBPF14Q5TI25 921 aa18.07■□□□□ 0.48
SSBP1-206ENST00000467681 ASAP1Q9ULH1 1129 aa18.07■□□□□ 0.48
SSBP1-206ENST00000467681 ATG3Q9NT62 314 aa18.06■□□□□ 0.48
SSBP1-206ENST00000467681 LRRC4BQ9NT99 713 aa18.06■□□□□ 0.48
SSBP1-206ENST00000467681 HTATSF1O43719 755 aaKnown RBP18.05■□□□□ 0.48
SSBP1-206ENST00000467681 SLC52A2Q9HAB3 445 aa18.05■□□□□ 0.48
SSBP1-206ENST00000467681 MAP3K5Q99683 1374 aa18.04■□□□□ 0.48
SSBP1-206ENST00000467681 BTAF1O14981 1849 aa18.03■□□□□ 0.48
SSBP1-206ENST00000467681 KCNQ4P56696 695 aa18.03■□□□□ 0.48
SSBP1-206ENST00000467681 NFE2L2Q16236 605 aa18.03■□□□□ 0.48
SSBP1-206ENST00000467681 PNISRQ8TF01 805 aaKnown RBP18.03■□□□□ 0.48
SSBP1-206ENST00000467681 CCNL1Q9UK58 526 aaPredicted RBP18.03■□□□□ 0.48
SSBP1-206ENST00000467681 PALLDQ8WX93 1383 aa18.03■□□□□ 0.48
SSBP1-206ENST00000467681 HMGB2P26583 209 aaKnown RBP18.02■□□□□ 0.48
SSBP1-206ENST00000467681 RTF1Q92541 710 aaKnown RBP18.02■□□□□ 0.48
SSBP1-206ENST00000467681 RUNDC1Q96C34 613 aa18.02■□□□□ 0.48
SSBP1-206ENST00000467681 MAPK8IP3Q9UPT6 1336 aa18.01■□□□□ 0.47
SSBP1-206ENST00000467681 DOT1LQ8TEK3 1739 aa18.01■□□□□ 0.47
SSBP1-206ENST00000467681 LOC102724428A0A0B4J2F2 783 aa18.01■□□□□ 0.47
SSBP1-206ENST00000467681 SIK1P57059 783 aa18.01■□□□□ 0.47
SSBP1-206ENST00000467681 R3HDM1Q15032 1099 aaKnown RBP18.01■□□□□ 0.47
SSBP1-206ENST00000467681 MRS2Q9HD23 443 aa18.01■□□□□ 0.47
SSBP1-206ENST00000467681 CCDC146Q8IYE0 955 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 209.7 ms