RNA–Protein interactions for RNA: ENST00000466601.5

DNMT3A-208, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 2

Gene DNMT3A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-208ENST00000466601 FAM182BQ5T319 152 aa19.37■□□□□ 0.69
DNMT3A-208ENST00000466601 ZCRB1Q8TBF4 217 aaKnown RBP19.37■□□□□ 0.69
DNMT3A-208ENST00000466601 HMOX1P09601 288 aa19.36■□□□□ 0.69
DNMT3A-208ENST00000466601 KDRP35968 1356 aa19.35■□□□□ 0.69
DNMT3A-208ENST00000466601 MARCH10Q8NA82 808 aaPredicted RBP19.35■□□□□ 0.69
DNMT3A-208ENST00000466601 DDX54Q8TDD1 881 aaKnown RBP19.34■□□□□ 0.69
DNMT3A-208ENST00000466601 U2AF1L5P0DN76 240 aaPredicted RBP19.33■□□□□ 0.68
DNMT3A-208ENST00000466601 U2AF1Q01081 240 aaKnown RBP eCLIP19.33■□□□□ 0.68
DNMT3A-208ENST00000466601 FAM196AQ6ZSG2 479 aa19.33■□□□□ 0.68
DNMT3A-208ENST00000466601 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.33■□□□□ 0.68
DNMT3A-208ENST00000466601 SPG7Q9UQ90 795 aa19.33■□□□□ 0.68
DNMT3A-208ENST00000466601 PLEKHG2Q9H7P9 1386 aa19.32■□□□□ 0.68
DNMT3A-208ENST00000466601 PLEKHO1Q53GL0 409 aaPredicted RBP19.31■□□□□ 0.68
DNMT3A-208ENST00000466601 PCDH11XQ9BZA7 1347 aa19.3■□□□□ 0.68
DNMT3A-208ENST00000466601 PCDH11YQ9BZA8 1340 aa19.3■□□□□ 0.68
DNMT3A-208ENST00000466601 AMOTQ4VCS5 1084 aa19.3■□□□□ 0.68
DNMT3A-208ENST00000466601 CYP27B1O15528 508 aa19.28■□□□□ 0.68
DNMT3A-208ENST00000466601 FCHSD2O94868 740 aa19.28■□□□□ 0.68
DNMT3A-208ENST00000466601 DIEXFQ68CQ4 756 aaKnown RBP19.28■□□□□ 0.68
DNMT3A-208ENST00000466601 RSPH6AQ9H0K4 717 aa19.28■□□□□ 0.68
DNMT3A-208ENST00000466601 PKD1L3Q7Z443 1732 aa19.28■□□□□ 0.68
DNMT3A-208ENST00000466601 BCL9O00512 1426 aa19.27■□□□□ 0.68
DNMT3A-208ENST00000466601 PRKAR2BP31323 418 aa19.27■□□□□ 0.68
DNMT3A-208ENST00000466601 CCDC184Q52MB2 194 aa19.27■□□□□ 0.68
DNMT3A-208ENST00000466601 UPF1Q92900 1129 aaKnown RBP eCLIP19.27■□□□□ 0.68
DNMT3A-208ENST00000466601 SHANK3Q9BYB0 1731 aa19.27■□□□□ 0.68
DNMT3A-208ENST00000466601 IFNL2Q8IZJ0 200 aa19.26■□□□□ 0.67
DNMT3A-208ENST00000466601 TRIM37O94972 964 aa19.25■□□□□ 0.67
DNMT3A-208ENST00000466601 PHKG2P15735 406 aa19.25■□□□□ 0.67
DNMT3A-208ENST00000466601 WDR43Q15061 677 aaKnown RBP eCLIP19.25■□□□□ 0.67
DNMT3A-208ENST00000466601 ZNF530Q6P9A1 599 aaPredicted RBP19.25■□□□□ 0.67
DNMT3A-208ENST00000466601 CCDC125Q86Z20 511 aa19.24■□□□□ 0.67
DNMT3A-208ENST00000466601 NKX1-1Q15270 411 aaPredicted RBP19.23■□□□□ 0.67
DNMT3A-208ENST00000466601 MTHFSDQ2M296 383 aaKnown RBP19.23■□□□□ 0.67
DNMT3A-208ENST00000466601 C1orf141Q5JVX7 400 aa19.23■□□□□ 0.67
DNMT3A-208ENST00000466601 ACSBG1Q96GR2 724 aa19.23■□□□□ 0.67
DNMT3A-208ENST00000466601 PNNQ9H307 717 aaKnown RBP19.23■□□□□ 0.67
DNMT3A-208ENST00000466601 MRS2Q9HD23 443 aa19.23■□□□□ 0.67
DNMT3A-208ENST00000466601 PHACTR3Q96KR7 559 aa19.22■□□□□ 0.67
DNMT3A-208ENST00000466601 NEFMP07197 916 aa19.21■□□□□ 0.67
DNMT3A-208ENST00000466601 SF3B2Q13435 895 aaKnown RBP19.21■□□□□ 0.67
DNMT3A-208ENST00000466601 GAS2L2Q8NHY3 880 aa19.21■□□□□ 0.67
DNMT3A-208ENST00000466601 ADAMTS8Q9UP79 889 aa19.21■□□□□ 0.67
DNMT3A-208ENST00000466601 KCNQ2O43526 872 aa19.2■□□□□ 0.66
DNMT3A-208ENST00000466601 HSP90AB1P08238 724 aaKnown RBP19.2■□□□□ 0.66
DNMT3A-208ENST00000466601 AKAP4Q5JQC9 854 aa19.2■□□□□ 0.66
DNMT3A-208ENST00000466601 PLEKHF1Q96S99 279 aa19.2■□□□□ 0.66
DNMT3A-208ENST00000466601 BCL11BQ9C0K0 894 aaPredicted RBP19.2■□□□□ 0.66
DNMT3A-208ENST00000466601 PRIM1P49642 420 aaKnown RBP19.19■□□□□ 0.66
DNMT3A-208ENST00000466601 PTF1AQ7RTS3 328 aa19.19■□□□□ 0.66
DNMT3A-208ENST00000466601 SBF2Q86WG5 1849 aa19.18■□□□□ 0.66
DNMT3A-208ENST00000466601 SYTL4Q96C24 671 aaPredicted RBP19.18■□□□□ 0.66
DNMT3A-208ENST00000466601 DCAF5Q96JK2 942 aa19.18■□□□□ 0.66
DNMT3A-208ENST00000466601 EP400Q96L91 3159 aa19.18■□□□□ 0.66
DNMT3A-208ENST00000466601 APBA3O96018 575 aa19.17■□□□□ 0.66
DNMT3A-208ENST00000466601 PNISRQ8TF01 805 aaKnown RBP19.17■□□□□ 0.66
DNMT3A-208ENST00000466601 MAPK8IP3Q9UPT6 1336 aa19.17■□□□□ 0.66
DNMT3A-208ENST00000466601 MPRIPQ6WCQ1 1025 aa19.16■□□□□ 0.66
DNMT3A-208ENST00000466601 KAT6BQ8WYB5 2073 aa19.15■□□□□ 0.66
DNMT3A-208ENST00000466601 NHSQ6T4R5 1651 aa19.15■□□□□ 0.66
DNMT3A-208ENST00000466601 DOT1LQ8TEK3 1739 aa19.15■□□□□ 0.66
DNMT3A-208ENST00000466601 BAG6P46379 1132 aa19.15■□□□□ 0.66
DNMT3A-208ENST00000466601 CCDC146Q8IYE0 955 aa19.15■□□□□ 0.66
DNMT3A-208ENST00000466601 GNAT3A8MTJ3 354 aa19.14■□□□□ 0.65
DNMT3A-208ENST00000466601 DEFB132Q7Z7B7 95 aa19.14■□□□□ 0.65
DNMT3A-208ENST00000466601 RUNDC1Q96C34 613 aa19.14■□□□□ 0.65
DNMT3A-208ENST00000466601 MAP3K5Q99683 1374 aa19.14■□□□□ 0.65
DNMT3A-208ENST00000466601 KDM6AO15550 1401 aaPredicted RBP19.14■□□□□ 0.65
DNMT3A-208ENST00000466601 TNS1Q9HBL0 1735 aaKnown RBP19.14■□□□□ 0.65
DNMT3A-208ENST00000466601 ERVV-2B6SEH9 535 aa19.13■□□□□ 0.65
DNMT3A-208ENST00000466601 CCER2I3L3R5 266 aa19.13■□□□□ 0.65
DNMT3A-208ENST00000466601 RNMTO43148 476 aaKnown RBP19.13■□□□□ 0.65
DNMT3A-208ENST00000466601 MIER1Q8N108 512 aa19.13■□□□□ 0.65
DNMT3A-208ENST00000466601 LGR6Q9HBX8 967 aa19.13■□□□□ 0.65
DNMT3A-208ENST00000466601 TOGARAM1Q9Y4F4 1720 aa19.12■□□□□ 0.65
DNMT3A-208ENST00000466601 NFE2L2Q16236 605 aa19.12■□□□□ 0.65
DNMT3A-208ENST00000466601 TMOD3Q9NYL9 352 aa19.12■□□□□ 0.65
DNMT3A-208ENST00000466601 PLSCR1O15162 318 aa19.11■□□□□ 0.65
DNMT3A-208ENST00000466601 CABP4P57796 275 aa19.11■□□□□ 0.65
DNMT3A-208ENST00000466601 EN1Q05925 392 aaPredicted RBP19.11■□□□□ 0.65
DNMT3A-208ENST00000466601 PIGBQ92521 554 aa19.11■□□□□ 0.65
DNMT3A-208ENST00000466601 IL17REQ8NFR9 667 aa19.1■□□□□ 0.65
DNMT3A-208ENST00000466601 RTF1Q92541 710 aaKnown RBP19.1■□□□□ 0.65
DNMT3A-208ENST00000466601 HTATSF1O43719 755 aaKnown RBP19.09■□□□□ 0.65
DNMT3A-208ENST00000466601 TMPOP42166 694 aaKnown RBP19.09■□□□□ 0.65
DNMT3A-208ENST00000466601 FAM9BQ8IZU0 186 aa19.09■□□□□ 0.65
DNMT3A-208ENST00000466601 CAMKK2Q96RR4 588 aa19.09■□□□□ 0.65
DNMT3A-208ENST00000466601 BTAF1O14981 1849 aa19.09■□□□□ 0.65
DNMT3A-208ENST00000466601 ITGB4P16144 1822 aa19.09■□□□□ 0.65
DNMT3A-208ENST00000466601 EZH2Q15910 746 aaKnown RBP19.08■□□□□ 0.64
DNMT3A-208ENST00000466601 NFATC2IPQ8NCF5 419 aa19.08■□□□□ 0.64
DNMT3A-208ENST00000466601 SLC52A2Q9HAB3 445 aa19.08■□□□□ 0.64
DNMT3A-208ENST00000466601 SCN11AQ9UI33 1791 aa19.08■□□□□ 0.64
DNMT3A-208ENST00000466601 RIPK4P57078 832 aa19.07■□□□□ 0.64
DNMT3A-208ENST00000466601 ADAMTS7Q9UKP4 1686 aa19.06■□□□□ 0.64
DNMT3A-208ENST00000466601 DCTN1Q14203 1278 aa19.06■□□□□ 0.64
DNMT3A-208ENST00000466601 MCM10Q7L590 875 aa19.06■□□□□ 0.64
DNMT3A-208ENST00000466601 RRP7AQ9Y3A4 280 aaKnown RBP19.06■□□□□ 0.64
DNMT3A-208ENST00000466601 CEMIPQ8WUJ3 1361 aa19.06■□□□□ 0.64
DNMT3A-208ENST00000466601 APAF1O14727 1248 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 112.7 ms