RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 RGL2O15211 777 aa14.13□□□□□ -0.15
APP-213ENST00000464867 PRAM1Q96QH2 718 aa14.13□□□□□ -0.15
APP-213ENST00000464867 DHX57Q6P158 1386 aaKnown RBP14.12□□□□□ -0.15
APP-213ENST00000464867 SLC15A2Q16348 729 aa14.12□□□□□ -0.15
APP-213ENST00000464867 LARP1Q6PKG0 1096 aaKnown RBP14.12□□□□□ -0.15
APP-213ENST00000464867 MAP3K5Q99683 1374 aa14.11□□□□□ -0.15
APP-213ENST00000464867 SBF2Q86WG5 1849 aa14.11□□□□□ -0.15
APP-213ENST00000464867 PARP4Q9UKK3 1724 aaKnown RBP14.11□□□□□ -0.15
APP-213ENST00000464867 BOLA1Q9Y3E2 137 aa14.11□□□□□ -0.15
APP-213ENST00000464867 HSPA6P17066 643 aa14.1□□□□□ -0.15
APP-213ENST00000464867 PIK3C2GO75747 1445 aa14.08□□□□□ -0.15
APP-213ENST00000464867 DDB1Q16531 1140 aa14.08□□□□□ -0.16
APP-213ENST00000464867 MS4A4AQ96JQ5 239 aa14.08□□□□□ -0.16
APP-213ENST00000464867 PHRF1Q9P1Y6 1649 aaKnown RBP14.08□□□□□ -0.16
APP-213ENST00000464867 SHANK3Q9BYB0 1731 aa14.07□□□□□ -0.16
APP-213ENST00000464867 SOX12O15370 315 aa14.07□□□□□ -0.16
APP-213ENST00000464867 ST18O60284 1047 aa14.07□□□□□ -0.16
APP-213ENST00000464867 TXNRD1Q16881 649 aa14.07□□□□□ -0.16
APP-213ENST00000464867 GRIN3BO60391 1043 aa14.06□□□□□ -0.16
APP-213ENST00000464867 NUTM2GQ5VZR2 741 aa14.06□□□□□ -0.16
APP-213ENST00000464867 C14orf93Q9H972 538 aaKnown RBP14.06□□□□□ -0.16
APP-213ENST00000464867 GPBP1L1Q9HC44 474 aaPredicted RBP14.06□□□□□ -0.16
APP-213ENST00000464867 PEAK1Q9H792 1746 aa14.06□□□□□ -0.16
APP-213ENST00000464867 HIRIP3Q9BW71 556 aaPredicted RBP14.05□□□□□ -0.16
APP-213ENST00000464867 STK24Q9Y6E0 443 aa14.05□□□□□ -0.16
APP-213ENST00000464867 POLD1P28340 1107 aa14.04□□□□□ -0.16
APP-213ENST00000464867 TMEM121BQ9BXQ6 578 aaPredicted RBP14.04□□□□□ -0.16
APP-213ENST00000464867 TAOK2Q9UL54 1235 aa14.04□□□□□ -0.16
APP-213ENST00000464867 ATP7BP35670 1465 aa14.04□□□□□ -0.16
APP-213ENST00000464867 GOLGB1Q14789 3259 aaKnown RBP14.03□□□□□ -0.16
APP-213ENST00000464867 STK25O00506 426 aa14.03□□□□□ -0.16
APP-213ENST00000464867 PTF1AQ7RTS3 328 aa14.03□□□□□ -0.16
APP-213ENST00000464867 TULP4Q9NRJ4 1543 aa14.02□□□□□ -0.16
APP-213ENST00000464867 CRB1P82279 1406 aa14.02□□□□□ -0.16
APP-213ENST00000464867 MINK1Q8N4C8 1332 aaPredicted RBP14.02□□□□□ -0.17
APP-213ENST00000464867 PRR36Q9H6K5 1346 aa14.02□□□□□ -0.17
APP-213ENST00000464867 WASLO00401 505 aaPredicted RBP14.02□□□□□ -0.17
APP-213ENST00000464867 CFAP70Q5T0N1 1121 aa14.02□□□□□ -0.17
APP-213ENST00000464867 CPDO75976 1380 aa14.01□□□□□ -0.17
APP-213ENST00000464867 G3V3G9 751 aa14.01□□□□□ -0.17
APP-213ENST00000464867 AKAP12Q02952 1782 aa14.01□□□□□ -0.17
APP-213ENST00000464867 ITSN1Q15811 1721 aa14.01□□□□□ -0.17
APP-213ENST00000464867 SPATA31E1Q6ZUB1 1445 aa14□□□□□ -0.17
APP-213ENST00000464867 ATP10DQ9P241 1426 aa14□□□□□ -0.17
APP-213ENST00000464867 ABTB2Q8N961 1025 aa14□□□□□ -0.17
APP-213ENST00000464867 CDCA7Q9BWT1 371 aaPredicted RBP14□□□□□ -0.17
APP-213ENST00000464867 LRRC37A3O60309 1634 aa14□□□□□ -0.17
APP-213ENST00000464867 LMO7Q8WWI1 1683 aa13.99□□□□□ -0.17
APP-213ENST00000464867 TOM1L2Q6ZVM7 507 aa13.99□□□□□ -0.17
APP-213ENST00000464867 COL5A2P05997 1499 aaPredicted RBP13.99□□□□□ -0.17
APP-213ENST00000464867 AATKQ6ZMQ8 1374 aa13.98□□□□□ -0.17
APP-213ENST00000464867 ZBTB7CA1YPR0 619 aa13.98□□□□□ -0.17
APP-213ENST00000464867 MICALL2Q8IY33 904 aa13.98□□□□□ -0.17
APP-213ENST00000464867 MARCH10Q8NA82 808 aaPredicted RBP13.98□□□□□ -0.17
APP-213ENST00000464867 FBXO22Q8NEZ5 403 aa13.98□□□□□ -0.17
APP-213ENST00000464867 SLC16A10Q8TF71 515 aa13.98□□□□□ -0.17
APP-213ENST00000464867 BCL9O00512 1426 aa13.98□□□□□ -0.17
APP-213ENST00000464867 SNPHO15079 494 aa13.97□□□□□ -0.17
APP-213ENST00000464867 APLP1P51693 650 aa13.97□□□□□ -0.17
APP-213ENST00000464867 NLRP13Q86W25 1043 aa13.97□□□□□ -0.17
APP-213ENST00000464867 TRAK1Q9UPV9 953 aa13.97□□□□□ -0.17
APP-213ENST00000464867 ZNF526Q8TF50 670 aaPredicted RBP13.96□□□□□ -0.17
APP-213ENST00000464867 NUDT16Q96DE0 195 aaKnown RBP13.96□□□□□ -0.17
APP-213ENST00000464867 MFRPQ9BY79 579 aa13.96□□□□□ -0.17
APP-213ENST00000464867 TOPAZ1Q8N9V7 1692 aa13.95□□□□□ -0.18
APP-213ENST00000464867 GCP02774 474 aa13.95□□□□□ -0.18
APP-213ENST00000464867 EXOC5O00471 708 aa13.94□□□□□ -0.18
APP-213ENST00000464867 NLRP6P59044 892 aa13.94□□□□□ -0.18
APP-213ENST00000464867 NLGN2Q8NFZ4 835 aa13.94□□□□□ -0.18
APP-213ENST00000464867 KAT6BQ8WYB5 2073 aa13.94□□□□□ -0.18
APP-213ENST00000464867 YBX3P16989 372 aaKnown RBP eCLIP13.93□□□□□ -0.18
APP-213ENST00000464867 ACEP12821 1306 aa13.92□□□□□ -0.18
APP-213ENST00000464867 TMEM92Q6UXU6 159 aa13.92□□□□□ -0.18
APP-213ENST00000464867 USP19O94966 1318 aa13.91□□□□□ -0.18
APP-213ENST00000464867 PRELPP51888 382 aa13.91□□□□□ -0.18
APP-213ENST00000464867 TNS4Q8IZW8 715 aa13.91□□□□□ -0.18
APP-213ENST00000464867 PLSCR2Q9NRY7 297 aa13.91□□□□□ -0.18
APP-213ENST00000464867 WNK3Q9BYP7 1800 aa13.91□□□□□ -0.18
APP-213ENST00000464867 PCDH10Q9P2E7 1040 aa13.9□□□□□ -0.18
APP-213ENST00000464867 POLR3AO14802 1390 aaPredicted RBP13.9□□□□□ -0.18
APP-213ENST00000464867 WDR17Q8IZU2 1322 aa13.9□□□□□ -0.19
APP-213ENST00000464867 CSB-PGBD3P0DP91 1061 aa13.89□□□□□ -0.19
APP-213ENST00000464867 ZNF827Q17R98 1081 aa13.89□□□□□ -0.19
APP-213ENST00000464867 COL13A1Q5TAT6 717 aaPredicted RBP13.89□□□□□ -0.19
APP-213ENST00000464867 MARVELD3Q96A59 401 aa13.89□□□□□ -0.19
APP-213ENST00000464867 TFCP2L1Q9NZI6 479 aa13.88□□□□□ -0.19
APP-213ENST00000464867 PAPPAQ13219 1627 aa13.88□□□□□ -0.19
APP-213ENST00000464867 QSER1Q2KHR3 1735 aa13.87□□□□□ -0.19
APP-213ENST00000464867 BRD4O60885 1362 aaPredicted RBP13.87□□□□□ -0.19
APP-213ENST00000464867 HOXB3P14651 431 aaPredicted RBP13.87□□□□□ -0.19
APP-213ENST00000464867 DNAJC5GQ8N7S2 189 aa13.87□□□□□ -0.19
APP-213ENST00000464867 ACSBG1Q96GR2 724 aa13.87□□□□□ -0.19
APP-213ENST00000464867 CDK19Q9BWU1 502 aa13.87□□□□□ -0.19
APP-213ENST00000464867 NHSQ6T4R5 1651 aa13.87□□□□□ -0.19
APP-213ENST00000464867 COL24A1Q17RW2 1714 aa13.87□□□□□ -0.19
APP-213ENST00000464867 PLEKHG3A1L390 1219 aa13.86□□□□□ -0.19
APP-213ENST00000464867 CARD10Q9BWT7 1032 aa13.86□□□□□ -0.19
APP-213ENST00000464867 ADCY9O60503 1353 aa13.85□□□□□ -0.19
APP-213ENST00000464867 SLC27A3Q5K4L6 730 aa13.85□□□□□ -0.19
APP-213ENST00000464867 MPHOSPH9Q99550 1183 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms