RNA–Protein interactions for RNA: ENST00000464256.1

PAXBP1-206, Transcript of PAX3 and PAX7 binding protein 1, humanhuman

TSL 1 (best)

Gene PAXBP1, Length 1,692 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAXBP1-206ENST00000464256 KAT6BQ8WYB5 2073 aa34.13■■■■□ 3.05
PAXBP1-206ENST00000464256 HMOX1P09601 288 aa34.13■■■■□ 3.05
PAXBP1-206ENST00000464256 MYBBP1AQ9BQG0 1328 aaKnown RBP34.13■■■■□ 3.05
PAXBP1-206ENST00000464256 TATP17735 454 aaPredicted RBP34.12■■■■□ 3.05
PAXBP1-206ENST00000464256 UPF1Q92900 1129 aaKnown RBP eCLIP34.12■■■■□ 3.05
PAXBP1-206ENST00000464256 U2SURPO15042 1029 aaKnown RBP34.1■■■■□ 3.05
PAXBP1-206ENST00000464256 DDX54Q8TDD1 881 aaKnown RBP34.1■■■■□ 3.05
PAXBP1-206ENST00000464256 CFAP53Q96M91 514 aa34.1■■■■□ 3.05
PAXBP1-206ENST00000464256 KDRP35968 1356 aa34.1■■■■□ 3.05
PAXBP1-206ENST00000464256 ZCRB1Q8TBF4 217 aaKnown RBP34.09■■■■□ 3.05
PAXBP1-206ENST00000464256 TNS1Q9HBL0 1735 aaKnown RBP34.07■■■■□ 3.04
PAXBP1-206ENST00000464256 PTF1AQ7RTS3 328 aa34.05■■■■□ 3.04
PAXBP1-206ENST00000464256 FAM196AQ6ZSG2 479 aa34.03■■■■□ 3.04
PAXBP1-206ENST00000464256 DOT1LQ8TEK3 1739 aa34.03■■■■□ 3.04
PAXBP1-206ENST00000464256 CYP27B1O15528 508 aa34.03■■■■□ 3.04
PAXBP1-206ENST00000464256 TRIM37O94972 964 aa34.02■■■■□ 3.04
PAXBP1-206ENST00000464256 TOGARAM1Q9Y4F4 1720 aa34■■■■□ 3.03
PAXBP1-206ENST00000464256 CCDC184Q52MB2 194 aa33.99■■■■□ 3.03
PAXBP1-206ENST00000464256 ACSBG1Q96GR2 724 aa33.99■■■■□ 3.03
PAXBP1-206ENST00000464256 U2AF1L5P0DN76 240 aaPredicted RBP33.97■■■■□ 3.03
PAXBP1-206ENST00000464256 U2AF1Q01081 240 aaKnown RBP eCLIP33.97■■■■□ 3.03
PAXBP1-206ENST00000464256 PCDH11XQ9BZA7 1347 aa33.97■■■■□ 3.03
PAXBP1-206ENST00000464256 PCDH11YQ9BZA8 1340 aa33.97■■■■□ 3.03
PAXBP1-206ENST00000464256 NHSQ6T4R5 1651 aa33.97■■■■□ 3.03
PAXBP1-206ENST00000464256 ANP32CO43423 234 aa33.96■■■■□ 3.03
PAXBP1-206ENST00000464256 KCNQ2O43526 872 aa33.96■■■■□ 3.03
PAXBP1-206ENST00000464256 BCL9O00512 1426 aa33.95■■■■□ 3.03
PAXBP1-206ENST00000464256 RSPH6AQ9H0K4 717 aa33.95■■■■□ 3.03
PAXBP1-206ENST00000464256 SPG7Q9UQ90 795 aa33.95■■■■□ 3.03
PAXBP1-206ENST00000464256 NUDCQ9Y266 331 aa33.95■■■■□ 3.03
PAXBP1-206ENST00000464256 VIRMAQ69YN4 1812 aaKnown RBP33.94■■■■□ 3.02
PAXBP1-206ENST00000464256 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP33.93■■■■□ 3.024e-8■■■■□ 20
PAXBP1-206ENST00000464256 ITGB4P16144 1822 aa33.92■■■■□ 3.02
PAXBP1-206ENST00000464256 BTAF1O14981 1849 aa33.91■■■■□ 3.02
PAXBP1-206ENST00000464256 PRKAR2BP31323 418 aa33.91■■■■□ 3.02
PAXBP1-206ENST00000464256 DEFB132Q7Z7B7 95 aa33.91■■■■□ 3.02
PAXBP1-206ENST00000464256 PHKG2P15735 406 aa33.9■■■■□ 3.02
PAXBP1-206ENST00000464256 PLEKHO1Q53GL0 409 aaPredicted RBP33.9■■■■□ 3.02
PAXBP1-206ENST00000464256 ZNF530Q6P9A1 599 aaPredicted RBP33.9■■■■□ 3.02
PAXBP1-206ENST00000464256 PHACTR3Q96KR7 559 aa33.9■■■■□ 3.02
PAXBP1-206ENST00000464256 MTHFSDQ2M296 383 aaKnown RBP33.87■■■■□ 3.01
PAXBP1-206ENST00000464256 PLEKHG2Q9H7P9 1386 aa33.87■■■■□ 3.01
PAXBP1-206ENST00000464256 AMOTQ4VCS5 1084 aa33.86■■■■□ 3.01
PAXBP1-206ENST00000464256 IFNL2Q8IZJ0 200 aa33.86■■■■□ 3.01
PAXBP1-206ENST00000464256 KDM6AO15550 1401 aaPredicted RBP33.84■■■■□ 3.01
PAXBP1-206ENST00000464256 PRIM1P49642 420 aaKnown RBP33.84■■■■□ 3.01
PAXBP1-206ENST00000464256 SYTL4Q96C24 671 aaPredicted RBP33.84■■■■□ 3.01
PAXBP1-206ENST00000464256 SCN11AQ9UI33 1791 aa33.83■■■■□ 3.01
PAXBP1-206ENST00000464256 BCL11BQ9C0K0 894 aaPredicted RBP33.83■■■■□ 3.01
PAXBP1-206ENST00000464256 APBA3O96018 575 aa33.82■■■■□ 3
PAXBP1-206ENST00000464256 NKX1-1Q15270 411 aaPredicted RBP33.82■■■■□ 3
PAXBP1-206ENST00000464256 CCDC125Q86Z20 511 aa33.82■■■■□ 3
PAXBP1-206ENST00000464256 DLG5Q8TDM6 1919 aa33.81■■■■□ 3
PAXBP1-206ENST00000464256 FCHSD2O94868 740 aa33.81■■■■□ 3
PAXBP1-206ENST00000464256 EN1Q05925 392 aaPredicted RBP33.81■■■■□ 3
PAXBP1-206ENST00000464256 SF3B2Q13435 895 aaKnown RBP33.8■■■■□ 3
PAXBP1-206ENST00000464256 MPRIPQ6WCQ1 1025 aa33.79■■■■□ 3
PAXBP1-206ENST00000464256 PLEKHF1Q96S99 279 aa33.79■■■■□ 3
PAXBP1-206ENST00000464256 C1orf141Q5JVX7 400 aa33.77■■■■□ 3
PAXBP1-206ENST00000464256 ADAMTS8Q9UP79 889 aa33.77■■■■□ 3
PAXBP1-206ENST00000464256 EZH2Q15910 746 aaKnown RBP33.75■■■□□ 2.99
PAXBP1-206ENST00000464256 ADAMTS7Q9UKP4 1686 aa33.75■■■□□ 2.99
PAXBP1-206ENST00000464256 CCDC146Q8IYE0 955 aa33.74■■■□□ 2.99
PAXBP1-206ENST00000464256 MRS2Q9HD23 443 aa33.74■■■□□ 2.99
PAXBP1-206ENST00000464256 BAG6P46379 1132 aa33.74■■■□□ 2.99
PAXBP1-206ENST00000464256 AKAP4Q5JQC9 854 aa33.74■■■□□ 2.99
PAXBP1-206ENST00000464256 LGR6Q9HBX8 967 aa33.74■■■□□ 2.99
PAXBP1-206ENST00000464256 WDR43Q15061 677 aaKnown RBP eCLIP33.73■■■□□ 2.99
PAXBP1-206ENST00000464256 DIEXFQ68CQ4 756 aaKnown RBP33.73■■■□□ 2.99
PAXBP1-206ENST00000464256 RREB1Q92766 1687 aa33.72■■■□□ 2.99
PAXBP1-206ENST00000464256 CAMKK2Q96RR4 588 aa33.72■■■□□ 2.99
PAXBP1-206ENST00000464256 RGPD3A6NKT7 1758 aaPredicted RBP33.72■■■□□ 2.99
PAXBP1-206ENST00000464256 RGPD4Q7Z3J3 1758 aa33.72■■■□□ 2.99
PAXBP1-206ENST00000464256 DCAF5Q96JK2 942 aa33.71■■■□□ 2.99
PAXBP1-206ENST00000464256 PIGBQ92521 554 aa33.7■■■□□ 2.99
PAXBP1-206ENST00000464256 GAS2L2Q8NHY3 880 aa33.69■■■□□ 2.98
PAXBP1-206ENST00000464256 NUP188Q5SRE5 1749 aa33.69■■■□□ 2.98
PAXBP1-206ENST00000464256 MAP3K5Q99683 1374 aa33.68■■■□□ 2.98
PAXBP1-206ENST00000464256 LY75O60449 1722 aa33.68■■■□□ 2.98
PAXBP1-206ENST00000464256 HSP90AB1P08238 724 aaKnown RBP33.67■■■□□ 2.98
PAXBP1-206ENST00000464256 PROM2Q8N271 834 aa33.67■■■□□ 2.98
PAXBP1-206ENST00000464256 PNISRQ8TF01 805 aaKnown RBP33.66■■■□□ 2.98
PAXBP1-206ENST00000464256 RNMTO43148 476 aaKnown RBP33.65■■■□□ 2.98
PAXBP1-206ENST00000464256 IL17REQ8NFR9 667 aa33.64■■■□□ 2.98
PAXBP1-206ENST00000464256 SIPA1L3O60292 1781 aaPredicted RBP33.64■■■□□ 2.98
PAXBP1-206ENST00000464256 GNAT3A8MTJ3 354 aa33.64■■■□□ 2.98
PAXBP1-206ENST00000464256 PLSCR1O15162 318 aa33.64■■■□□ 2.98
PAXBP1-206ENST00000464256 TMOD3Q9NYL9 352 aa33.64■■■□□ 2.98
PAXBP1-206ENST00000464256 DCTN1Q14203 1278 aa33.63■■■□□ 2.97
PAXBP1-206ENST00000464256 MRC1P22897 1456 aa33.62■■■□□ 2.97
PAXBP1-206ENST00000464256 ERVV-2B6SEH9 535 aa33.62■■■□□ 2.97
PAXBP1-206ENST00000464256 KCNQ4P56696 695 aa33.62■■■□□ 2.97
PAXBP1-206ENST00000464256 NFATC2IPQ8NCF5 419 aa33.62■■■□□ 2.97
PAXBP1-206ENST00000464256 MAPK8IP3Q9UPT6 1336 aa33.62■■■□□ 2.97
PAXBP1-206ENST00000464256 SENP3-EIF4A1A0A087X0R7 540 aa33.61■■■□□ 2.97
PAXBP1-206ENST00000464256 CABP4P57796 275 aa33.61■■■□□ 2.97
PAXBP1-206ENST00000464256 ASAP1Q9ULH1 1129 aa33.61■■■□□ 2.97
PAXBP1-206ENST00000464256 RRP7AQ9Y3A4 280 aaKnown RBP33.61■■■□□ 2.97
PAXBP1-206ENST00000464256 MCM10Q7L590 875 aa33.6■■■□□ 2.97
PAXBP1-206ENST00000464256 NFE2L2Q16236 605 aa33.59■■■□□ 2.97
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms