RNA–Protein interactions for RNA: ENST00000462668.5

SMC4-203, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 4,235 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-203ENST00000462668 POTEB2H3BUK9 544 aa4.65□□□□□ -1.67
SMC4-203ENST00000462668 PRMT3O60678 531 aa4.65□□□□□ -1.67
SMC4-203ENST00000462668 PRPF40AO75400 957 aaKnown RBP4.65□□□□□ -1.67
SMC4-203ENST00000462668 CCNYL3P0C7X3 344 aa4.65□□□□□ -1.67
SMC4-203ENST00000462668 FGD1P98174 961 aa4.65□□□□□ -1.67
SMC4-203ENST00000462668 DPH6Q7L8W6 267 aa4.65□□□□□ -1.67
SMC4-203ENST00000462668 ZSCAN29Q8IWY8 852 aaPredicted RBP4.65□□□□□ -1.67
SMC4-203ENST00000462668 PRR14Q9BWN1 585 aa4.65□□□□□ -1.67
SMC4-203ENST00000462668 PBX2P40425 430 aa4.64□□□□□ -1.67
SMC4-203ENST00000462668 GTF2IP78347 998 aa4.64□□□□□ -1.67
SMC4-203ENST00000462668 BRINP2Q9C0B6 783 aa4.64□□□□□ -1.67
SMC4-203ENST00000462668 CAPN12Q6ZSI9 719 aa4.64□□□□□ -1.67
SMC4-203ENST00000462668 SEPT12Q8IYM1 358 aa4.64□□□□□ -1.67
SMC4-203ENST00000462668 GAS2L2Q8NHY3 880 aa4.64□□□□□ -1.67
SMC4-203ENST00000462668 ADAM32Q8TC27 787 aa4.64□□□□□ -1.67
SMC4-203ENST00000462668 SFI1A8K8P3 1242 aa4.64□□□□□ -1.67
SMC4-203ENST00000462668 NBPF14Q5TI25 921 aa4.64□□□□□ -1.67
SMC4-203ENST00000462668 EGFLAMQ63HQ2 1017 aa4.64□□□□□ -1.67
SMC4-203ENST00000462668 CCDC102BQ68D86 513 aa4.64□□□□□ -1.67
SMC4-203ENST00000462668 SEPT3Q9UH03 358 aa4.64□□□□□ -1.67
SMC4-203ENST00000462668 TLDC2A0PJX2 215 aa4.64□□□□□ -1.67
SMC4-203ENST00000462668 HRO43593 1189 aa4.64□□□□□ -1.67
SMC4-203ENST00000462668 TSC1Q92574 1164 aa4.64□□□□□ -1.67
SMC4-203ENST00000462668 SLC4A9Q96Q91 983 aa4.64□□□□□ -1.67
SMC4-203ENST00000462668 DOLKQ9UPQ8 538 aa4.64□□□□□ -1.67
SMC4-203ENST00000462668 FMNL1O95466 1100 aaPredicted RBP4.63□□□□□ -1.67
SMC4-203ENST00000462668 PRKD2Q9BZL6 878 aa4.63□□□□□ -1.67
SMC4-203ENST00000462668 FAM13AO94988 1023 aa4.63□□□□□ -1.67
SMC4-203ENST00000462668 ERCC5P28715 1186 aaPredicted RBP4.63□□□□□ -1.67
SMC4-203ENST00000462668 HIRIP3Q9BW71 556 aaPredicted RBP4.63□□□□□ -1.67
SMC4-203ENST00000462668 PSEN2P49810 448 aa4.63□□□□□ -1.67
SMC4-203ENST00000462668 GLYCTKQ8IVS8 523 aa4.63□□□□□ -1.67
SMC4-203ENST00000462668 GJD3Q8N144 294 aa4.63□□□□□ -1.67
SMC4-203ENST00000462668 PRIMPOLQ96LW4 560 aa4.63□□□□□ -1.67
SMC4-203ENST00000462668 DMRTB1Q96MA1 342 aa4.63□□□□□ -1.67
SMC4-203ENST00000462668 TMEM229AB2RXF0 380 aa4.62□□□□□ -1.67
SMC4-203ENST00000462668 C4orf48Q5BLP8 95 aa4.62□□□□□ -1.67
SMC4-203ENST00000462668 ENOX2Q16206 610 aaKnown RBP4.62□□□□□ -1.67
SMC4-203ENST00000462668 SCUBE3Q8IX30 993 aa4.62□□□□□ -1.67
SMC4-203ENST00000462668 LNPKQ9C0E8 428 aa4.62□□□□□ -1.67
SMC4-203ENST00000462668 BIN2Q9UBW5 565 aaPredicted RBP4.62□□□□□ -1.67
SMC4-203ENST00000462668 POTEB3A0JP26 581 aa4.62□□□□□ -1.67
SMC4-203ENST00000462668 HIRAP54198 1017 aaPredicted RBP4.62□□□□□ -1.67
SMC4-203ENST00000462668 POTEBQ6S5H4 581 aa4.62□□□□□ -1.67
SMC4-203ENST00000462668 CHMP4AQ9BY43 222 aa4.62□□□□□ -1.67
SMC4-203ENST00000462668 SCNN1DP51172 638 aa4.61□□□□□ -1.67
SMC4-203ENST00000462668 ZNF358Q9NW07 568 aa4.61□□□□□ -1.67
SMC4-203ENST00000462668 HRH3Q9Y5N1 445 aa4.61□□□□□ -1.67
SMC4-203ENST00000462668 GIGYF1O75420 1035 aaPredicted RBP4.61□□□□□ -1.67
SMC4-203ENST00000462668 MYO19Q96H55 970 aa4.61□□□□□ -1.67
SMC4-203ENST00000462668 ZFRQ96KR1 1074 aaKnown RBP4.61□□□□□ -1.67
SMC4-203ENST00000462668 SEPT9Q9UHD8 586 aaPredicted RBP4.61□□□□□ -1.67
SMC4-203ENST00000462668 SLC4A3P48751 1232 aa4.61□□□□□ -1.67
SMC4-203ENST00000462668 MTFR1Q15390 333 aa4.61□□□□□ -1.67
SMC4-203ENST00000462668 RNF20Q5VTR2 975 aa4.61□□□□□ -1.67
SMC4-203ENST00000462668 PTCRAQ6ISU1 281 aaPredicted RBP4.61□□□□□ -1.67
SMC4-203ENST00000462668 ZNF746Q6NUN9 644 aaPredicted RBP4.61□□□□□ -1.67
SMC4-203ENST00000462668 ZNF295-AS1Q8N0V1 137 aa4.61□□□□□ -1.67
SMC4-203ENST00000462668 DDX41Q9UJV9 622 aaKnown RBP4.61□□□□□ -1.67
SMC4-203ENST00000462668 CTSHP09668 335 aa4.6□□□□□ -1.67
SMC4-203ENST00000462668 APLP1P51693 650 aa4.6□□□□□ -1.67
SMC4-203ENST00000462668 PARP2Q9UGN5 583 aa4.6□□□□□ -1.67
SMC4-203ENST00000462668 PCDHB9Q9Y5E1 797 aa4.6□□□□□ -1.67
SMC4-203ENST00000462668 PUS10Q3MIT2 529 aaKnown RBP4.6□□□□□ -1.67
SMC4-203ENST00000462668 ANKRD13AQ8IZ07 590 aa4.6□□□□□ -1.67
SMC4-203ENST00000462668 FRMD6Q96NE9 622 aa4.6□□□□□ -1.67
SMC4-203ENST00000462668 SRA1Q9HD15 236 aaKnown RBP4.6□□□□□ -1.67
SMC4-203ENST00000462668 GPR182O15218 404 aa4.6□□□□□ -1.67
SMC4-203ENST00000462668 ERVK-9P63128 1117 aa4.6□□□□□ -1.67
SMC4-203ENST00000462668 TSNAXIP1Q2TAA8 658 aa4.6□□□□□ -1.67
SMC4-203ENST00000462668 ZNF594Q96JF6 807 aaPredicted RBP4.6□□□□□ -1.67
SMC4-203ENST00000462668 ARHGAP9Q9BRR9 750 aa4.6□□□□□ -1.67
SMC4-203ENST00000462668 BRPF3Q9ULD4 1205 aa4.6□□□□□ -1.67
SMC4-203ENST00000462668 NLGN1Q8N2Q7 840 aa4.59□□□□□ -1.67
SMC4-203ENST00000462668 NR1I2O75469 434 aa4.59□□□□□ -1.67
SMC4-203ENST00000462668 EHHADHQ08426 723 aa4.59□□□□□ -1.67
SMC4-203ENST00000462668 SERINC3Q13530 473 aa4.59□□□□□ -1.67
SMC4-203ENST00000462668 UNC93B1Q9H1C4 597 aa4.59□□□□□ -1.67
SMC4-203ENST00000462668 MAP4K5Q9Y4K4 846 aa4.59□□□□□ -1.67
SMC4-203ENST00000462668 NCLP19338 710 aaKnown RBP4.59□□□□□ -1.68
SMC4-203ENST00000462668 RNF19AQ9NV58 838 aa4.59□□□□□ -1.68
SMC4-203ENST00000462668 FGRP09769 529 aa4.58□□□□□ -1.68
SMC4-203ENST00000462668 ZNF662Q6ZS27 426 aa4.58□□□□□ -1.68
SMC4-203ENST00000462668 NUDT12Q9BQG2 462 aa4.58□□□□□ -1.68
SMC4-203ENST00000462668 CDV3Q9UKY7 258 aaKnown RBP4.58□□□□□ -1.68
SMC4-203ENST00000462668 USP4Q13107 963 aa4.58□□□□□ -1.68
SMC4-203ENST00000462668 ERFEQ4G0M1 354 aa4.58□□□□□ -1.68
SMC4-203ENST00000462668 FAM26DQ5JW98 314 aa4.58□□□□□ -1.68
SMC4-203ENST00000462668 SOWAHBA6NEL2 793 aa4.58□□□□□ -1.68
SMC4-203ENST00000462668 HDGFP51858 240 aaKnown RBP4.58□□□□□ -1.68
SMC4-203ENST00000462668 FBF1Q8TES7 1133 aa4.58□□□□□ -1.68
SMC4-203ENST00000462668 PIF1Q9H611 641 aa4.58□□□□□ -1.68
SMC4-203ENST00000462668 ANO2Q9NQ90 1003 aa4.58□□□□□ -1.68
SMC4-203ENST00000462668 MYT1LQ9UL68 1186 aa4.58□□□□□ -1.68
SMC4-203ENST00000462668 ENPP3O14638 875 aa4.57□□□□□ -1.68
SMC4-203ENST00000462668 ITGAEP38570 1179 aa4.57□□□□□ -1.68
SMC4-203ENST00000462668 GJA8P48165 433 aa4.57□□□□□ -1.68
SMC4-203ENST00000462668 TSEN2Q8NCE0 465 aaKnown RBP4.57□□□□□ -1.68
SMC4-203ENST00000462668 MKL1Q969V6 931 aa4.57□□□□□ -1.68
SMC4-203ENST00000462668 C2orf49Q9BVC5 232 aaPredicted RBP4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms