RNA–Protein interactions for RNA: ENST00000462112.1

SSR1-203, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4 BASIC

Gene SSR1, Length 1,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-203ENST00000462112 ABCB7O75027 752 aa11.03□□□□□ -0.64
SSR1-203ENST00000462112 FBLN1P23142 703 aa11.03□□□□□ -0.64
SSR1-203ENST00000462112 CNGB1Q14028 1251 aaPredicted RBP11.03□□□□□ -0.64
SSR1-203ENST00000462112 SP7Q8TDD2 431 aaPredicted RBP11.02□□□□□ -0.65
SSR1-203ENST00000462112 UPF1Q92900 1129 aaKnown RBP eCLIP11.02□□□□□ -0.65
SSR1-203ENST00000462112 HMGB2P26583 209 aaKnown RBP11.01□□□□□ -0.65
SSR1-203ENST00000462112 BAG6P46379 1132 aa11.01□□□□□ -0.65
SSR1-203ENST00000462112 DDX10Q13206 875 aaKnown RBP11.01□□□□□ -0.65
SSR1-203ENST00000462112 NUDCQ9Y266 331 aa11.01□□□□□ -0.65
SSR1-203ENST00000462112 THSD7AQ9UPZ6 1657 aa11.01□□□□□ -0.65
SSR1-203ENST00000462112 OVOS2A0A0G2JMS6 1433 aa11.01□□□□□ -0.65
SSR1-203ENST00000462112 ZNF316A6NFI3 1004 aaPredicted RBP11□□□□□ -0.65
SSR1-203ENST00000462112 MTHFSP49914 203 aa11□□□□□ -0.65
SSR1-203ENST00000462112 ZCRB1Q8TBF4 217 aaKnown RBP11□□□□□ -0.65
SSR1-203ENST00000462112 SPG7Q9UQ90 795 aa11□□□□□ -0.65
SSR1-203ENST00000462112 PARP4Q9UKK3 1724 aaKnown RBP11□□□□□ -0.65
SSR1-203ENST00000462112 DIAPH1O60610 1272 aaKnown RBP10.99□□□□□ -0.65
SSR1-203ENST00000462112 NEFMP07197 916 aa10.99□□□□□ -0.65
SSR1-203ENST00000462112 RALBP1Q15311 655 aa10.99□□□□□ -0.65
SSR1-203ENST00000462112 NBPF6Q5VWK0 638 aa10.99□□□□□ -0.65
SSR1-203ENST00000462112 PROM2Q8N271 834 aa10.99□□□□□ -0.65
SSR1-203ENST00000462112 NBPF4Q96M43 638 aa10.99□□□□□ -0.65
SSR1-203ENST00000462112 PLEKHG2Q9H7P9 1386 aa10.99□□□□□ -0.65
SSR1-203ENST00000462112 BRWD3Q6RI45 1802 aa10.98□□□□□ -0.65
SSR1-203ENST00000462112 EIF4A2Q14240 407 aaKnown RBP10.98□□□□□ -0.65
SSR1-203ENST00000462112 DDX54Q8TDD1 881 aaKnown RBP10.98□□□□□ -0.65
SSR1-203ENST00000462112 TNS2Q63HR2 1409 aa10.98□□□□□ -0.65
SSR1-203ENST00000462112 AMOTQ4VCS5 1084 aa10.97□□□□□ -0.65
SSR1-203ENST00000462112 EYA1Q99502 592 aa10.97□□□□□ -0.65
SSR1-203ENST00000462112 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.97□□□□□ -0.655e-11■■■□□ 15
SSR1-203ENST00000462112 PCDH11XQ9BZA7 1347 aa10.97□□□□□ -0.65
SSR1-203ENST00000462112 PCDH11YQ9BZA8 1340 aa10.97□□□□□ -0.65
SSR1-203ENST00000462112 WNK3Q9BYP7 1800 aa10.96□□□□□ -0.65
SSR1-203ENST00000462112 DISP2A7MBM2 1401 aa10.96□□□□□ -0.65
SSR1-203ENST00000462112 PLEKHO1Q53GL0 409 aaPredicted RBP10.96□□□□□ -0.65
SSR1-203ENST00000462112 USHBP1Q8N6Y0 703 aa10.96□□□□□ -0.65
SSR1-203ENST00000462112 PNNQ9H307 717 aaKnown RBP10.96□□□□□ -0.65
SSR1-203ENST00000462112 U2SURPO15042 1029 aaKnown RBP10.95□□□□□ -0.66
SSR1-203ENST00000462112 TRIM37O94972 964 aa10.95□□□□□ -0.66
SSR1-203ENST00000462112 APBA3O96018 575 aa10.95□□□□□ -0.66
SSR1-203ENST00000462112 HSP90AB1P08238 724 aaKnown RBP10.95□□□□□ -0.66
SSR1-203ENST00000462112 MARCH10Q8NA82 808 aaPredicted RBP10.95□□□□□ -0.66
SSR1-203ENST00000462112 BCL11BQ9C0K0 894 aaPredicted RBP10.95□□□□□ -0.66
SSR1-203ENST00000462112 PEAK1Q9H792 1746 aa10.95□□□□□ -0.66
SSR1-203ENST00000462112 BCL9O00512 1426 aa10.94□□□□□ -0.66
SSR1-203ENST00000462112 PARD3Q8TEW0 1356 aa10.94□□□□□ -0.66
SSR1-203ENST00000462112 IGSF1Q8N6C5 1336 aa10.94□□□□□ -0.66
SSR1-203ENST00000462112 PPP2R1AP30153 589 aa10.94□□□□□ -0.66
SSR1-203ENST00000462112 C1orf141Q5JVX7 400 aa10.94□□□□□ -0.66
SSR1-203ENST00000462112 FAM182BQ5T319 152 aa10.94□□□□□ -0.66
SSR1-203ENST00000462112 IFNL2Q8IZJ0 200 aa10.94□□□□□ -0.66
SSR1-203ENST00000462112 RGPD1P0DJD0 1748 aa10.94□□□□□ -0.66
SSR1-203ENST00000462112 LRRC37A3O60309 1634 aa10.94□□□□□ -0.66
SSR1-203ENST00000462112 IL13P35225 146 aa10.93□□□□□ -0.66
SSR1-203ENST00000462112 SULT6B1Q6IMI4 303 aa10.93□□□□□ -0.66
SSR1-203ENST00000462112 KAT6BQ8WYB5 2073 aa10.93□□□□□ -0.66
SSR1-203ENST00000462112 NBPF14Q5TI25 921 aa10.92□□□□□ -0.66
SSR1-203ENST00000462112 SYTL4Q96C24 671 aaPredicted RBP10.92□□□□□ -0.66
SSR1-203ENST00000462112 FBXO3Q9UK99 471 aa10.92□□□□□ -0.66
SSR1-203ENST00000462112 ZBTB12Q9Y330 459 aaPredicted RBP10.92□□□□□ -0.66
SSR1-203ENST00000462112 MYBBP1AQ9BQG0 1328 aaKnown RBP10.91□□□□□ -0.66
SSR1-203ENST00000462112 RGPD2P0DJD1 1756 aa10.91□□□□□ -0.66
SSR1-203ENST00000462112 ANP32CO43423 234 aa10.91□□□□□ -0.66
SSR1-203ENST00000462112 MEGF6O75095 1541 aa10.9□□□□□ -0.66
SSR1-203ENST00000462112 PLSCR1O15162 318 aa10.9□□□□□ -0.66
SSR1-203ENST00000462112 U2AF1L5P0DN76 240 aaPredicted RBP10.9□□□□□ -0.66
SSR1-203ENST00000462112 U2AF1Q01081 240 aaKnown RBP eCLIP10.9□□□□□ -0.66
SSR1-203ENST00000462112 ZNF530Q6P9A1 599 aaPredicted RBP10.9□□□□□ -0.66
SSR1-203ENST00000462112 NCAPD2Q15021 1401 aa10.9□□□□□ -0.66
SSR1-203ENST00000462112 FCHSD2O94868 740 aa10.89□□□□□ -0.67
SSR1-203ENST00000462112 GAS2L2Q8NHY3 880 aa10.89□□□□□ -0.67
SSR1-203ENST00000462112 SMARCC1Q92922 1105 aaPredicted RBP10.89□□□□□ -0.67
SSR1-203ENST00000462112 ACSBG1Q96GR2 724 aa10.89□□□□□ -0.67
SSR1-203ENST00000462112 KDRP35968 1356 aa10.89□□□□□ -0.67
SSR1-203ENST00000462112 HMOX1P09601 288 aa10.88□□□□□ -0.67
SSR1-203ENST00000462112 EN1Q05925 392 aaPredicted RBP10.88□□□□□ -0.67
SSR1-203ENST00000462112 WDR43Q15061 677 aaKnown RBP eCLIP10.88□□□□□ -0.67
SSR1-203ENST00000462112 DCAF5Q96JK2 942 aa10.88□□□□□ -0.67
SSR1-203ENST00000462112 PHKG2P15735 406 aa10.87□□□□□ -0.67
SSR1-203ENST00000462112 PRIM1P49642 420 aaKnown RBP10.87□□□□□ -0.67
SSR1-203ENST00000462112 NKX1-1Q15270 411 aaPredicted RBP10.87□□□□□ -0.67
SSR1-203ENST00000462112 AKAP4Q5JQC9 854 aa10.87□□□□□ -0.67
SSR1-203ENST00000462112 DEFB132Q7Z7B7 95 aa10.87□□□□□ -0.67
SSR1-203ENST00000462112 PRKRIP1Q9H875 184 aaPredicted RBP10.87□□□□□ -0.67
SSR1-203ENST00000462112 TMOD3Q9NYL9 352 aa10.87□□□□□ -0.67
SSR1-203ENST00000462112 MAPK8IP3Q9UPT6 1336 aa10.86□□□□□ -0.67
SSR1-203ENST00000462112 ERVV-2B6SEH9 535 aa10.86□□□□□ -0.67
SSR1-203ENST00000462112 CYP27B1O15528 508 aa10.86□□□□□ -0.67
SSR1-203ENST00000462112 CABP4P57796 275 aa10.86□□□□□ -0.67
SSR1-203ENST00000462112 SLC27A3Q5K4L6 730 aa10.86□□□□□ -0.67
SSR1-203ENST00000462112 MPRIPQ6WCQ1 1025 aa10.86□□□□□ -0.67
SSR1-203ENST00000462112 CHRDL2Q6WN34 429 aa10.86□□□□□ -0.67
SSR1-203ENST00000462112 RTF1Q92541 710 aaKnown RBP10.86□□□□□ -0.67
SSR1-203ENST00000462112 PKD1L3Q7Z443 1732 aa10.85□□□□□ -0.67
SSR1-203ENST00000462112 AEBP1Q8IUX7 1158 aa10.85□□□□□ -0.67
SSR1-203ENST00000462112 CAMKK2Q96RR4 588 aa10.85□□□□□ -0.67
SSR1-203ENST00000462112 SBF2Q86WG5 1849 aa10.85□□□□□ -0.67
SSR1-203ENST00000462112 NHSQ6T4R5 1651 aa10.85□□□□□ -0.67
SSR1-203ENST00000462112 KCNQ2O43526 872 aa10.84□□□□□ -0.67
SSR1-203ENST00000462112 PRKAR2BP31323 418 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms